Clone IP17795 Report

Search the DGRC for IP17795

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:177
Well:95
Vector:pOT2
Associated Gene/TranscriptCG42708-RF
Protein status:IP17795.pep: gold
Sequenced Size:2241

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
nemy 2008-04-29 Release 5.5 accounting
nemy 2008-08-15 Release 5.9 accounting
nemy 2008-12-18 5.12 accounting

Clone Sequence Records

IP17795.complete Sequence

2241 bp assembled on 2007-03-07

GenBank Submission: BT030426

> IP17795.complete
GCGCTCAAGTCAAGGCGATCCGAGATCCGAAATCCAGTATAGAAAATACA
ATACGATACAAAACAGTCAAAGGCATCGAATATCACGTATACGCCGTGAT
GGTGCAAACAACTGAAATGGAGGCGCTGAAGCGCCAGAGTGAGGATGGGG
ATACCAAGGAGCGGGAGGAGAACTATAGGCGGGGCAAGGAGCAAGAGACC
ACGGAGACGGCGGCCATCATAGAGGAGATTATCGAGGGCATCTCGCTGCA
GAATCGTCGCGGCACCATAGTGCGTACTATTTCCGCGATAATCAGCCATC
GCGAGCAGGAGCAGCGAAATGCGGAGGATGTGCTATTCGACATGTTCGCC
AGCGAGGAGACGGGCCTCATCTCGATGGGCAAGTTCCTGGCCGGGCTAAA
GACCACCGGAATTCGCCGGAACGATCCGCGAGTGCGAGAACTGATGGACA
ACTTGAAGAAAGTGCACAAGCTAAATAACTACGAGACGGGTTCTTCGGCG
GAAACTCAGCATCTCAATCGAGAGACCTTCAAGGCTGTGGTTGCCCCCAA
TATTGTGCTGATTGCCAAGGCCTTCCGGCAGCAGTTCGTTATTCCCGACT
TTACGAGTTTCGTCAAGGACATCGAGGATATTTACAATCGCTGCAAGACC
AACACTTTGGGCAAGTTGGCCGACTACATTCCGCAGCTGGCTCGCTATAA
TCCCGATTCCTGGGGCCTGAGCATCTGCACGATTGATGGCCAGCGCTTCT
CCATCGGCGATGTGGATGTGCCCTTCACACTCCAGAGTTGCAGTAAGCCG
CTGACCTACGCCATTGCCCTGGAGAAACTGGGTCCCAAGGTCGTGCACTC
TTATGTGGGCCAGGAGCCGAGTGGCAGGAACTTCAACGAACTTGTTCTGG
ATCAGAACAAAAAGCCACACAATCCGATGATCAACGCTGGTGCCATTCTG
ACGTGCTCCCTGATGAACGCCCTTGTCAAGCCGGACATGACCTCCGCTGA
GATCTTCGACTACACCATGTCTTGGTTCAAACGGCTGTCGGGCGGAGAGT
ATATCGGCTTTAATAATGCCGTATTCCTGTCCGAACGCGAGGCTGCCGAT
CGGAACTATGCCCTGGGCTTCTACATGCGGGAGAACAAGTGCTTCCCCAA
GCGCACCAATCTCAAGGAGGTGATGGACTTTTACTTCCAGTGCTGCTCCA
TGGAGACCAACTGCGAGGCAATGTCCGTAATCGCGGCCAGTTTGGCCAAT
GGTGGCATCTGCCCCACCACCGAGGAGAAGGTGTTCCGGCCGGAGGTAAT
CCGGGATGTGCTCTCGATTATGCACTCATGCGGTACATACGACTATTCCG
GACAGTTCGCCTTCAAGGTGGGTCTGCCAGCCAAGTCTGGAGTGAGTGGC
GGCATGATGCTGGTCATCCCCAACGTAATGGGCATCTTTGCCTGGTCTCC
GCCCTTGGATCACTTAGGCAATACAGTGAGAGGACTACAGTTTTGTGAGG
AGCTGGTCTCCATGTTCAATTTCCATCGCTACGACAACCTGAAGCATCTG
TCCAACAAGAAGGATCCGCGGAAGCACCGCTACGAGACCAAGGGTCTGTC
CATCGTGAATCTACTCTTTTCAGCTGCCAGCGGCGATGTTACAGCCTTGC
GGCGTCATCGTCTCTCCGGAATGGATATCACTCTGGCCGACTACGATGGT
CGCACTGCCCTCCATTTGGCTGCGTCCGAAGGACACTTGGAGTGCGTCAA
GTTCCTGCTGGAACAGTGTCATGTACCACACAACCCCAAGGATCGCTGGG
GAAATCTGCCCGTGGATGAGGCAGAGAACTTCGGCCACTGTCACGTGGTG
GAGTTCCTTCGCTCCTGGGCGGAGAAGGCCGACCAGTCCAGCGAGGAGTG
CAAGCCCGAGGCGGTGACCAGCAAGACACAAGCGGATGAGGAAATCTGCA
GCACAAGCGACCTGGAGACCAGTCCGACAACCAGTCCCATTCCCACTCCC
GTGGAATCCGGATCCAGGGCAGGATCAGGACGGTCCAGCCCGGTGCCATC
GGATGCGGGCAGCACGGCGAGCGCCGGAAGCAGCATCGATGACAAAACCA
AGCCGGGACTATAAGCGTACAGAGATCCAGGATCCCAGCCGAATCTCTCT
GACTAAATTATTCGCACAACATTTTAGTTTATATATGATGTATTAGATTA
AAGTTAAGAGTACCCAAAATACCAAAAAAAAAAAAAAAAAA

IP17795.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
nemy.k 2890 nemy.k 199..2422 1..2224 11120 100 Plus
nemy-RF 2737 nemy-RF 46..2269 1..2224 11120 100 Plus
nemy.e 2927 nemy.e 411..2344 291..2224 9670 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:46:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8558828..8559859 1941..910 5040 99.2 Minus
chr2R 21145070 chr2R 8559936..8560309 909..536 1870 100 Minus
chr2R 21145070 chr2R 8558339..8558623 2223..1939 1425 100 Minus
chr2R 21145070 chr2R 8561475..8561765 295..1 1350 98 Minus
chr2R 21145070 chr2R 8560372..8560614 535..293 1200 99.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12671556..12672587 1941..910 5160 100 Minus
2R 25286936 2R 12672664..12673037 909..536 1870 100 Minus
2R 25286936 2R 12674206..12674500 295..1 1475 100 Minus
2R 25286936 2R 12671066..12671351 2224..1939 1430 100 Minus
2R 25286936 2R 12673100..12673342 535..293 1215 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12672755..12673786 1941..910 5160 100 Minus
2R 25260384 2R 12673863..12674236 909..536 1870 100 Minus
2R 25260384 2R 12675405..12675699 295..1 1475 100 Minus
2R 25260384 2R 12672265..12672550 2224..1939 1430 100 Minus
2R 25260384 2R 12674299..12674541 535..293 1215 100 Minus
Blast to na_te.dros performed on 2019-03-16 15:46:10 has no hits.

IP17795.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:47:01 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8558339..8558621 1941..2223 100 <- Minus
chr2R 8558829..8559859 910..1940 99 <- Minus
chr2R 8559936..8560309 536..909 100 <- Minus
chr2R 8560372..8560611 296..535 99 <- Minus
chr2R 8561475..8561765 1..295 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:10:03 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..2016 99..2114 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:07:11 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 1..2016 99..2114 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:18:19 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 1..2016 99..2114 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:17:13 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..2016 99..2114 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:48:09 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 1..2016 99..2114 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:36:09 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..2204 20..2223 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:07:11 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 1..2204 20..2223 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:19 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 9..2231 1..2223 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:17:14 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
nemy-RF 1..2204 20..2223 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:48:09 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
CG42708-RF 24..2246 1..2223 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:47:01 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12671067..12671349 1941..2223 100 <- Minus
2R 12671557..12672587 910..1940 100 <- Minus
2R 12672664..12673037 536..909 100 <- Minus
2R 12673100..12673339 296..535 100 <- Minus
2R 12674206..12674500 1..295 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:47:01 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12671067..12671349 1941..2223 100 <- Minus
2R 12671557..12672587 910..1940 100 <- Minus
2R 12672664..12673037 536..909 100 <- Minus
2R 12673100..12673339 296..535 100 <- Minus
2R 12674206..12674500 1..295 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:47:01 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12671067..12671349 1941..2223 100 <- Minus
2R 12671557..12672587 910..1940 100 <- Minus
2R 12672664..12673037 536..909 100 <- Minus
2R 12673100..12673339 296..535 100 <- Minus
2R 12674206..12674500 1..295 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:19 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8560169..8560542 536..909 100 <- Minus
arm_2R 8560605..8560844 296..535 100 <- Minus
arm_2R 8558572..8558854 1941..2223 100 <- Minus
arm_2R 8559062..8560092 910..1940 100 <- Minus
arm_2R 8561711..8562005 1..295 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:40:24 Download gff for IP17795.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12672266..12672548 1941..2223 100 <- Minus
2R 12672756..12673786 910..1940 100 <- Minus
2R 12673863..12674236 536..909 100 <- Minus
2R 12674299..12674538 296..535 100 <- Minus
2R 12675405..12675699 1..295 100   Minus

IP17795.pep Sequence

Translation from 2 to 2113

> IP17795.pep
AQVKAIRDPKSSIENTIRYKTVKGIEYHVYAVMVQTTEMEALKRQSEDGD
TKEREENYRRGKEQETTETAAIIEEIIEGISLQNRRGTIVRTISAIISHR
EQEQRNAEDVLFDMFASEETGLISMGKFLAGLKTTGIRRNDPRVRELMDN
LKKVHKLNNYETGSSAETQHLNRETFKAVVAPNIVLIAKAFRQQFVIPDF
TSFVKDIEDIYNRCKTNTLGKLADYIPQLARYNPDSWGLSICTIDGQRFS
IGDVDVPFTLQSCSKPLTYAIALEKLGPKVVHSYVGQEPSGRNFNELVLD
QNKKPHNPMINAGAILTCSLMNALVKPDMTSAEIFDYTMSWFKRLSGGEY
IGFNNAVFLSEREAADRNYALGFYMRENKCFPKRTNLKEVMDFYFQCCSM
ETNCEAMSVIAASLANGGICPTTEEKVFRPEVIRDVLSIMHSCGTYDYSG
QFAFKVGLPAKSGVSGGMMLVIPNVMGIFAWSPPLDHLGNTVRGLQFCEE
LVSMFNFHRYDNLKHLSNKKDPRKHRYETKGLSIVNLLFSAASGDVTALR
RHRLSGMDITLADYDGRTALHLAASEGHLECVKFLLEQCHVPHNPKDRWG
NLPVDEAENFGHCHVVEFLRSWAEKADQSSEECKPEAVTSKTQADEEICS
TSDLETSPTTSPIPTPVESGSRAGSGRSSPVPSDAGSTASAGSSIDDKTK
PGL*

IP17795.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11462-PA 725 GF11462-PA 104..725 78..703 3150 92.7 Plus
Dana\lyso-PA 655 GF19463-PA 570..653 537..621 156 42.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22560-PA 716 GG22560-PA 112..716 99..703 3270 98.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19960-PA 711 GH19960-PA 103..711 89..703 2937 87.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:42
Subject Length Description Subject Range Query Range Score Percent Strand
GLS-PF 671 CG8772-PF 1..671 33..703 3511 100 Plus
GLS-PK 727 CG42708-PK 29..727 11..703 3255 89.4 Plus
GLS-PB 737 CG8772-PB 29..737 11..703 3234 88.2 Plus
GLS-PC 658 CG8772-PC 54..658 99..703 3192 100 Plus
GLS-PE 648 CG8772-PE 44..648 99..703 3192 100 Plus
GLS-PA 706 CG8772-PA 102..706 99..703 3192 100 Plus
GLS-PD 716 CG8772-PD 112..716 99..703 3192 100 Plus
GLS-PI 701 CG8772-PI 44..701 99..703 3128 91.9 Plus
GLS-PJ 712 CG42708-PJ 39..633 99..697 2947 94.3 Plus
GLS-PH 775 CG8772-PH 102..696 99..697 2947 94.3 Plus
GLS-PJ 712 CG42708-PJ 655..712 646..703 290 98.3 Plus
GLS-PH 775 CG8772-PH 718..775 646..703 290 98.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19918-PA 727 GI19918-PA 115..727 78..703 2916 86.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17734-PA 719 GL17734-PA 109..719 78..703 3023 89 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21309-PE 694 GA21309-PE 1..694 33..703 3156 86.5 Plus
Dpse\GA21309-PF 755 GA21309-PF 31..755 11..703 3022 77.7 Plus
Dpse\GA21309-PA 719 GA21309-PA 109..719 78..703 3019 88.8 Plus
Dpse\GA21309-PD 632 GA21309-PD 22..632 78..703 3011 88.8 Plus
Dpse\GA21309-PC 622 GA21309-PC 27..622 99..703 3009 91.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20343-PA 716 GM20343-PA 112..716 99..703 3296 99.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25822-PA 716 GD25822-PA 112..716 99..703 3306 99.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15085-PA 706 GJ15085-PA 97..706 78..703 2926 87.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21608-PA 701 GK21608-PA 87..701 65..703 2991 86.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13430-PA 716 GE13430-PA 112..716 99..703 3278 98.8 Plus

IP17795.hyp Sequence

Translation from 2 to 2113

> IP17795.hyp
AQVKAIRDPKSSIENTIRYKTVKGIEYHVYAVMVQTTEMEALKRQSEDGD
TKEREENYRRGKEQETTETAAIIEEIIEGISLQNRRGTIVRTISAIISHR
EQEQRNAEDVLFDMFASEETGLISMGKFLAGLKTTGIRRNDPRVRELMDN
LKKVHKLNNYETGSSAETQHLNRETFKAVVAPNIVLIAKAFRQQFVIPDF
TSFVKDIEDIYNRCKTNTLGKLADYIPQLARYNPDSWGLSICTIDGQRFS
IGDVDVPFTLQSCSKPLTYAIALEKLGPKVVHSYVGQEPSGRNFNELVLD
QNKKPHNPMINAGAILTCSLMNALVKPDMTSAEIFDYTMSWFKRLSGGEY
IGFNNAVFLSEREAADRNYALGFYMRENKCFPKRTNLKEVMDFYFQCCSM
ETNCEAMSVIAASLANGGICPTTEEKVFRPEVIRDVLSIMHSCGTYDYSG
QFAFKVGLPAKSGVSGGMMLVIPNVMGIFAWSPPLDHLGNTVRGLQFCEE
LVSMFNFHRYDNLKHLSNKKDPRKHRYETKGLSIVNLLFSAASGDVTALR
RHRLSGMDITLADYDGRTALHLAASEGHLECVKFLLEQCHVPHNPKDRWG
NLPVDEAENFGHCHVVEFLRSWAEKADQSSEECKPEAVTSKTQADEEICS
TSDLETSPTTSPIPTPVESGSRAGSGRSSPVPSDAGSTASAGSSIDDKTK
PGL*

IP17795.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG42708-PF 671 CG8772-PF 1..671 33..703 3511 100 Plus
CG42708-PK 727 CG42708-PK 29..727 11..703 3255 89.4 Plus
CG42708-PB 737 CG8772-PB 29..737 11..703 3234 88.2 Plus
CG42708-PC 658 CG8772-PC 54..658 99..703 3192 100 Plus
CG42708-PE 648 CG8772-PE 44..648 99..703 3192 100 Plus