Clone IP17824 Report

Search the DGRC for IP17824

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:178
Well:24
Vector:pOT2
Associated Gene/TranscriptCG34136-RA
Protein status:IP17824.pep: gold
Sequenced Size:1065

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34136 2008-04-29 Release 5.5 accounting
CG34136 2008-08-15 Release 5.9 accounting
Tsp29Fa 2008-08-15 Release 5.9 accounting
Tsp29Fa 2008-12-18 5.12 accounting
CG34136 2008-12-18 5.12 accounting

Clone Sequence Records

IP17824.complete Sequence

1065 bp assembled on 2007-01-15

GenBank Submission: BT030177

> IP17824.complete
TCCAGCGTGGCAGACCGGCACAAAGTTGGATGCCTCGACGGATTCTCCGG
ATACATTTCCGCCCATGCGGTCAGCCTAGGAGCTGCAGGGGTGGTCATTG
CCATCCTCCAGTTCTTTGGCGTAATCTTTGCCTGCTACATTGCACGTGAG
ATTAAAATCCGTAATGGAATTACTGGTTTTATGTAGGTCCGGAGGAAATC
GATTCTGTAGGATGAGATGAGCTAGATAAGAATGGTGCCGATATTTACTT
TAAATTCAATGATGTTCTTGGACATATACTGACATTTACCCTTGCTTGTA
AAAATAAATAAATATATTTCTAAACAAAAAAAAAAAAAAAAAAGTTGTGC
TCCGCAGCAACAACCGTTAGCCGGAAAGAAGAGAGCCGGAAGCGCGTGCC
GCTAAAGTTTACGGAAATAAAGGCGGACAAAGGTTCATCCTCGCCTGAAA
CTGACAAAGTGCCAGAATCCAGATTAAACGATTTACGAGCGACTAAAAAA
AAAGGAAAAACATTTCGGGCGGTGCAGTGTGCATTGCAAAGGCATTGCAG
AACTCTAAGAACACATCTCCTCCGCACCCGCATCCGGAAACGGATTGGGA
ATATCGGAAAATGTGGCCCAACTTTTTGGCTGTCGTTTCCCTACTGTGCC
TTGCATTCTTCGCTTGGGCAAAAGCTGGACCTGTGCCAATTGTGAATGAG
CACCAACAATTGATGCCGAAAGTGCCTCAATGGCACTGCCTGCGCTACTT
TAAGCATGATGTCCTGATGATGCGCCGCTGTCGCCACTTGCGAGTCCCTA
CAGCGCCACGACTGGGCGATGTCCTCAAGCGAAAGAAGAAATAGTATAAG
GCCCACAGACAATCGTCCACAATACTCAAAACGACTGAACCAGAAGATCA
ATTAAAAGAACATTTTTTAAAGGATTTCTAACCAGACCAAAGCTAAATCA
AATATATACTACCAAATATACAATTTCTGGAACTTAGTATAAGTCTAACC
AATTGTACTTCATAGTTGAGTAAGATTTCAATAAAACGACTAAATATATA
AAAAAAAAAAAAAAA

IP17824.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG34136-RA 857 CG34136-RA 130..839 344..1053 3550 100 Plus
Tsp29Fa.a 1035 Tsp29Fa.a 704..1034 1..331 1655 100 Plus
Tsp29Fa-RA 1045 Tsp29Fa-RA 714..1044 1..331 1655 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 21095412..21095768 344..700 1785 100 Plus
chr2L 23010047 chr2L 21097072..21097422 699..1049 1755 100 Plus
chr2L 23010047 chr2L 8934795..8935019 107..331 1125 100 Plus
chr2L 23010047 chr2L 8934561..8934671 1..111 555 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21096922..21097278 344..700 1785 100 Plus
2L 23513712 2L 21098582..21098936 699..1053 1775 100 Plus
2L 23513712 2L 8935878..8936102 107..331 1125 100 Plus
2L 23513712 2L 8935644..8935754 1..111 555 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21096922..21097278 344..700 1785 100 Plus
2L 23513712 2L 21098582..21098936 699..1053 1775 100 Plus
2L 23513712 2L 8935878..8936102 107..331 1125 100 Plus
2L 23513712 2L 8935644..8935754 1..111 555 100 Plus
Blast to na_te.dros performed 2019-03-16 04:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 6262..6344 897..975 117 63.9 Plus

IP17824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:24:58 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 21095411..21095768 344..700 99 -> Plus
chr2L 21097074..21097422 701..1049 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:43:54 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..234 611..844 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:12:33 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..234 611..844 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:28:37 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..234 611..844 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:22:37 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..234 611..844 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:38:26 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..234 611..844 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:43:54 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..706 344..1049 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:12:33 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..706 344..1049 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:37 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..706 344..1049 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:22:38 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..627 389..1015 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:38:26 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
CG34136-RA 1..706 344..1049 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:58 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21096921..21097278 343..700 99 -> Plus
2L 21098584..21098932 701..1049 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:58 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21096921..21097278 343..700 99 -> Plus
2L 21098584..21098932 701..1049 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:24:58 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21096921..21097278 343..700 99 -> Plus
2L 21098584..21098932 701..1049 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:37 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21096921..21097278 343..700 99 -> Plus
arm_2L 21098584..21098932 701..1049 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:44:05 Download gff for IP17824.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21096921..21097278 343..700 99 -> Plus
2L 21098584..21098932 701..1049 100   Plus

IP17824.pep Sequence

Translation from 610 to 843

> IP17824.pep
MWPNFLAVVSLLCLAFFAWAKAGPVPIVNEHQQLMPKVPQWHCLRYFKHD
VLMMRRCRHLRVPTAPRLGDVLKRKKK*

IP17824.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21277-PA 77 GG21277-PA 1..77 1..77 399 98.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10408-PA 79 GH10408-PA 1..78 1..77 368 89.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG34136-PA 77 CG34136-PA 1..77 1..77 427 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:00:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23282-PA 78 GI23282-PA 1..78 1..77 364 89.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25886-PA 78 GL25886-PA 1..78 1..77 358 89.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25175-PA 78 GA25175-PA 1..78 1..77 358 89.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23390-PA 77 GM23390-PA 1..77 1..77 399 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24299-PA 77 GD24299-PA 1..77 1..77 399 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:00:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23791-PA 79 GJ23791-PA 1..78 1..77 313 84.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24316-PA 78 GK24316-PA 1..77 1..77 368 88.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:00:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12893-PA 77 GE12893-PA 1..77 1..77 399 98.7 Plus

IP17824.hyp Sequence

Translation from 610 to 843

> IP17824.hyp
MWPNFLAVVSLLCLAFFAWAKAGPVPIVNEHQQLMPKVPQWHCLRYFKHD
VLMMRRCRHLRVPTAPRLGDVLKRKKK*

IP17824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:47:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34136-PA 77 CG34136-PA 1..77 1..77 427 100 Plus