Clone Sequence Records
IP17849.complete Sequence
820 bp assembled on 2009-06-16
GenBank Submission: BT088828.1
> IP17849.complete
GATGGCGTATATTCGAAATTTTCTGAATTCCCCCAATGACTGGACCCGAC
TTAATGAAAATATCAATGGAATAAAGCCACTGAATAGCTGCTTTTATTTC
TTCAGCTTGAAAACGGGCTGCAATTTGATCGCCGGATTCGAAGCATTGGT
AAATGTGCTACAAATGTGCAGCATTTACTTGTCGGAGATGGAGGTCAAGA
CCACAATCACAACTACGGAGTCACCGGATTCGATGCTTGTCACTAGGGAA
CCGGACGGAGATATGCTGGGACCCAACATGAGAACGCCTATGTTTGAAAC
TAACCTCTTCTTCCAAAAAGCACTAATCTCGTTGACTATCTTCAGATCAG
TGCTACTTATTGTAGGTGCAGAATGGAGTCACATATCCTGTCTCGTCCTT
TGGATTTGTATTACGGTTATAACCTTGTTAATTAGCACTTGTAATGATAT
CATGCAAGATGACGAGCTGCTGACTTTTCTCTTTTCTACCATTTCTATTT
TTCTTGAAATCTATTTCTGCGCAGTGGTTGCCTCCTTGGTTTTGAAATTG
CAGCAAAAACTTCGTCGTAACGTGCAGGAATCGGAAGTGCTGTTCACACG
AATGGAGGAAGTTTAATTAAATTCAAGATAATTAAACTATACATTTAAAT
TTGCAAGCTCCTACTTACAATTATTTAATTTTTACTTGTGTTGTTGCATT
CCCAAATTGAAAAAGCATGTACTCATAATAATTTGGAAAAAAATACACAA
TATACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
TAAAAAAAAAAAAAAAAAAA
IP17849.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34188-RA | 1022 | CG34188-RA | 248..1007 | 1..760 | 3800 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:13:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 11314721..11315096 | 376..1 | 1835 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 11314210..11314469 | 760..501 | 1300 | 100 | Minus |
chr2R | 21145070 | chr2R | 11314544..11314668 | 500..376 | 625 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:13:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15427600..15427975 | 376..1 | 1880 | 100 | Minus |
2R | 25286936 | 2R | 15427089..15427348 | 760..501 | 1300 | 100 | Minus |
2R | 25286936 | 2R | 15427423..15427547 | 500..376 | 625 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 15428799..15429174 | 376..1 | 1880 | 100 | Minus |
2R | 25260384 | 2R | 15428288..15428547 | 760..501 | 1300 | 100 | Minus |
2R | 25260384 | 2R | 15428622..15428746 | 500..376 | 625 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 21:13:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 711..781 | 609..682 | 146 | 70.3 | Plus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 5866..5985 | 746..626 | 124 | 60.2 | Minus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 749..795 | 601..648 | 111 | 72.9 | Plus |
IP17849.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:14:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 11314212..11314469 | 501..758 | 100 | <- | Minus |
chr2R | 11314544..11314667 | 377..500 | 100 | <- | Minus |
chr2R | 11314721..11315096 | 1..376 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:36 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 1..615 | 2..616 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:48:01 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 1..615 | 2..616 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:40:16 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 1..615 | 2..616 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:46:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 1..615 | 2..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-16 09:46:46 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 49..664 | 1..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:48:01 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 49..806 | 1..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:40:16 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 49..806 | 1..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34188-RA | 49..806 | 1..758 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15427091..15427348 | 501..758 | 100 | <- | Minus |
2R | 15427423..15427546 | 377..500 | 100 | <- | Minus |
2R | 15427600..15427975 | 1..376 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15427091..15427348 | 501..758 | 100 | <- | Minus |
2R | 15427423..15427546 | 377..500 | 100 | <- | Minus |
2R | 15427600..15427975 | 1..376 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:07 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15427091..15427348 | 501..758 | 100 | <- | Minus |
2R | 15427423..15427546 | 377..500 | 100 | <- | Minus |
2R | 15427600..15427975 | 1..376 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:40:16 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11314596..11314853 | 501..758 | 100 | <- | Minus |
arm_2R | 11314928..11315051 | 377..500 | 100 | <- | Minus |
arm_2R | 11315105..11315480 | 1..376 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:33 Download gff for
IP17849.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15428290..15428547 | 501..758 | 100 | <- | Minus |
2R | 15428622..15428745 | 377..500 | 100 | <- | Minus |
2R | 15428799..15429174 | 1..376 | 100 | | Minus |
IP17849.hyp Sequence
Translation from 0 to 615
> IP17849.hyp
MAYIRNFLNSPNDWTRLNENINGIKPLNSCFYFFSLKTGCNLIAGFEALV
NVLQMCSIYLSEMEVKTTITTTESPDSMLVTREPDGDMLGPNMRTPMFET
NLFFQKALISLTIFRSVLLIVGAEWSHISCLVLWICITVITLLISTCNDI
MQDDELLTFLFSTISIFLEIYFCAVVASLVLKLQQKLRRNVQESEVLFTR
MEEV*
IP17849.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:48:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34188-PA | 204 | CG34188-PA | 1..204 | 1..204 | 1046 | 100 | Plus |
CG30472-PB | 212 | CG30472-PB | 19..185 | 14..186 | 282 | 39.1 | Plus |
IP17849.pep Sequence
Translation from 1 to 615
> IP17849.pep
MAYIRNFLNSPNDWTRLNENINGIKPLNSCFYFFSLKTGCNLIAGFEALV
NVLQMCSIYLSEMEVKTTITTTESPDSMLVTREPDGDMLGPNMRTPMFET
NLFFQKALISLTIFRSVLLIVGAEWSHISCLVLWICITVITLLISTCNDI
MQDDELLTFLFSTISIFLEIYFCAVVASLVLKLQQKLRRNVQESEVLFTR
MEEV*
IP17849.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11869-PA | 210 | GF11869-PA | 1..120 | 1..125 | 196 | 39.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22353-PA | 150 | GG22353-PA | 1..89 | 42..137 | 309 | 64.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34188-PA | 204 | CG34188-PA | 1..204 | 1..204 | 1046 | 100 | Plus |
CG30472-PB | 212 | CG30472-PB | 19..185 | 14..186 | 282 | 39.1 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:01:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL20042-PA | 244 | GL20042-PA | 39..134 | 27..124 | 155 | 39 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:01:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20139-PA | 108 | GM20139-PA | 6..81 | 111..186 | 155 | 42.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:01:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25617-PA | 108 | GD25617-PA | 6..81 | 111..186 | 151 | 42.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:01:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14153-PA | 204 | GE14153-PA | 1..204 | 1..204 | 830 | 80.9 | Plus |