BDGP Sequence Production Resources |
Search the DGRC for IP18003
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 180 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG34236-RB |
Protein status: | IP18003.pep: gold |
Sequenced Size: | 633 |
Gene | Date | Evidence |
---|---|---|
CG34236 | 2008-04-29 | Release 5.5 accounting |
CG34236 | 2008-08-15 | Release 5.9 accounting |
CG34236 | 2008-12-18 | 5.12 accounting |
633 bp assembled on 2007-01-15
GenBank Submission: BT030197
> IP18003.complete ACGAACCGTCCACTCGAAAAATATAGCAGAATATATTCGCCGAAAATAAA CAATCTTATATCTTATCGGCAATGCCACTGAAATTTCATAGATTGCTGCT GCCGCTGCTCCTGTTCGCTTCTCAACTGCTGGCTGAAATTCCGCAGTGCT TTCACTTCACCTGGCTTGGTGCCTACTCGAATCACTCGAACATTCACACG GAAACCTGTGAGTCCAGAGTTGGTGACTTTAATGAAATACCCTGCGCAGA ACCATTGGTTGTGACACCCGAAGATACAGTGCCGGATGTAAAGGCTCTGT GGCAGAATAATACCGAGGATCGCGACAACTATCTGTGCCAAATGTCGCCG GGTCGTTCATGTGTGAAATACTCGTACATATTCAAAGGCGGAATACAAAA CATCACGTACATGTGCGCCAATGTAAACAGCACCAACGGATGCTATCGAC AGACCCACCCAAGTGGTATGGTTGTGGAGGCATGTGTCTGCACCTCCCGG GTGGGCTTGATACCCTGTAATGGCTGCTCGAAGTCGCAGTGTGCTGTGCT GGGCTGGGCACTTTGTTTGTACGGCCTTTATCAATGGCTAAATAAATATC GCATAGTTTGAACTGCAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34236-RB | 771 | CG34236-RB | 67..685 | 1..619 | 3095 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9491875..9492097 | 616..394 | 1115 | 100 | Minus |
chr2R | 21145070 | chr2R | 9492569..9492706 | 138..1 | 690 | 100 | Minus |
chr2R | 21145070 | chr2R | 9492364..9492492 | 267..139 | 645 | 100 | Minus |
chr2R | 21145070 | chr2R | 9492165..9492290 | 393..268 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13604571..13604796 | 619..394 | 1130 | 100 | Minus |
2R | 25286936 | 2R | 13605268..13605405 | 138..1 | 690 | 100 | Minus |
2R | 25286936 | 2R | 13605063..13605191 | 267..139 | 645 | 100 | Minus |
2R | 25286936 | 2R | 13604864..13604989 | 393..268 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13605770..13605995 | 619..394 | 1130 | 100 | Minus |
2R | 25260384 | 2R | 13606467..13606604 | 138..1 | 690 | 100 | Minus |
2R | 25260384 | 2R | 13606262..13606390 | 267..139 | 645 | 100 | Minus |
2R | 25260384 | 2R | 13606063..13606188 | 393..268 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader3 | 5484 | invader3 INVADER3 5484bp | 830..863 | 416..450 | 109 | 82.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9491875..9492097 | 394..616 | 100 | <- | Minus |
chr2R | 9492165..9492290 | 268..393 | 100 | <- | Minus |
chr2R | 9492364..9492492 | 139..267 | 100 | <- | Minus |
chr2R | 9492569..9492706 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RA | 1..436 | 72..508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 1..540 | 72..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 1..540 | 72..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RA | 1..436 | 72..508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 1..540 | 72..611 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RA | 1..436 | 72..508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 1..616 | 1..616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 1..616 | 1..616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RA | 1..436 | 72..508 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34236-RB | 31..646 | 1..616 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13604574..13604796 | 394..616 | 100 | <- | Minus |
2R | 13604864..13604989 | 268..393 | 100 | <- | Minus |
2R | 13605063..13605191 | 139..267 | 100 | <- | Minus |
2R | 13605268..13605405 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13604574..13604796 | 394..616 | 100 | <- | Minus |
2R | 13604864..13604989 | 268..393 | 100 | <- | Minus |
2R | 13605063..13605191 | 139..267 | 100 | <- | Minus |
2R | 13605268..13605405 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13604574..13604796 | 394..616 | 100 | <- | Minus |
2R | 13604864..13604989 | 268..393 | 100 | <- | Minus |
2R | 13605063..13605191 | 139..267 | 100 | <- | Minus |
2R | 13605268..13605405 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9492369..9492494 | 268..393 | 100 | <- | Minus |
arm_2R | 9492568..9492696 | 139..267 | 100 | <- | Minus |
arm_2R | 9492773..9492910 | 1..138 | 100 | Minus | |
arm_2R | 9492079..9492301 | 394..616 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13605773..13605995 | 394..616 | 100 | <- | Minus |
2R | 13606063..13606188 | 268..393 | 100 | <- | Minus |
2R | 13606262..13606390 | 139..267 | 100 | <- | Minus |
2R | 13606467..13606604 | 1..138 | 100 | Minus |
Translation from 71 to 610
> IP18003.pep MPLKFHRLLLPLLLFASQLLAEIPQCFHFTWLGAYSNHSNIHTETCESRV GDFNEIPCAEPLVVTPEDTVPDVKALWQNNTEDRDNYLCQMSPGRSCVKY SYIFKGGIQNITYMCANVNSTNGCYRQTHPSGMVVEACVCTSRVGLIPCN GCSKSQCAVLGWALCLYGLYQWLNKYRIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22476-PA | 139 | GG22476-PA | 1..137 | 1..137 | 659 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20872-PA | 290 | GH20872-PA | 139..282 | 24..166 | 574 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34236-PC | 179 | CG34236-PC | 1..179 | 1..179 | 997 | 100 | Plus |
CG34236-PB | 179 | CG34236-PB | 1..179 | 1..179 | 997 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20983-PA | 174 | GI20983-PA | 20..170 | 21..170 | 572 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17004-PA | 181 | GL17004-PA | 1..181 | 1..179 | 707 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24993-PA | 181 | GA24993-PA | 1..181 | 1..179 | 709 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20260-PA | 179 | GM20260-PA | 1..179 | 1..179 | 871 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25746-PA | 175 | GD25746-PA | 1..159 | 1..159 | 781 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20703-PA | 176 | GJ20703-PA | 22..172 | 21..170 | 583 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13346-PA | 230 | GE13346-PA | 1..136 | 8..143 | 642 | 86 | Plus |
Translation from 71 to 610
> IP18003.hyp MPLKFHRLLLPLLLFASQLLAEIPQCFHFTWLGAYSNHSNIHTETCESRV GDFNEIPCAEPLVVTPEDTVPDVKALWQNNTEDRDNYLCQMSPGRSCVKY SYIFKGGIQNITYMCANVNSTNGCYRQTHPSGMVVEACVCTSRVGLIPCN GCSKSQCAVLGWALCLYGLYQWLNKYRIV*