Clone IP18034 Report

Search the DGRC for IP18034

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:180
Well:34
Vector:pOT2
Associated Gene/TranscriptCG11241-RB
Protein status:IP18034.pep: gold
Sequenced Size:2006

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11241 2008-04-29 Release 5.5 accounting
CG11241 2008-08-15 Release 5.9 accounting
CG11241 2008-12-18 5.12 accounting

Clone Sequence Records

IP18034.complete Sequence

2006 bp assembled on 2007-09-19

GenBank Submission: BT030854

> IP18034.complete
TTACTAGTGGACGACTGTCCTCGCGAAAAACACGTGCCACACAGTTGATT
CGAGTTCAAAAAGTGCATCCAAACCAGAAAAGTTTACATAGAAAGTGATA
GGAGCGTAGAAAAGAATCCGAAACCAAAAATGATATCCAAGCGAGTGTTA
GCTCAGACCCGGCAGCTCCTTCCCAGGTCCTCGGTCCGTAGGAGCTCCAG
CTCATCGGTGCACTCAAAGGCAGCCCCCGCCATGATAGCACAGATGCAGG
GCGAGATGCCCGACTGCAACCACCGCCCGGCGGCCTACGAGGGCTCCACC
TACGAGCAGATTCTCAAGACCCGACGCAACCACCTGACACCGAATCTGCT
GGCCCACTTCAAAAAGCCACTTGTGATCCACGCTGGCCACATGCAGTGGC
TGTACGATCATGAGGGCCGGCGCTACCTGGACATGTTTGGTGGAATCGTT
ACTGTGTCCGTTGGACATTGTCACCCAAAGGTTAACCAGGCGCTCAGCGA
GCAGACTGCCAAACTGTGGCACACGACAAACATCTACATGCACCCCAAGA
TCCACGAGTATGCCGAGCGATTGGTGGCCAAGTTCCCAGGAGACCTCAAG
AGCGTGTGCTTTGTGAACTCCGGTTCGGAGGCCAACGATCTTGCTATGTT
AATGGCGCGCCTTTACACAGGCAACCAGGATATCCTTTCCTTGCGCAACT
GCTACCACGGAATGTCCCCCTACACCATGGGCCTCACGGCACACTCCACC
TGGCGCTTTCCACTGCCCGGGGTGAACAGCGGACTTGTGCACGTGATGAA
CCCCGATCCGTACCAGGGCATTTGGGGCGGCTCAAACTGCCGGGACTCCC
CTGTGCAGACCACCCGCAAATGCCAGTGCACCGTAGGCTGCCAGGCCGGT
GACGCCTACTATAATGAGCTGGAGGAGACCTTCAAGTATTCCCTGCCGCG
CGGCAAGGTGGCTGCTATGTTTGCAGAGTCAATCCAGGGGGTCGGCGGAA
CGGTTCAGTTCCCAAAAGGGTACCTCAAGCGGGCAGCAGCTCTGGTCAGA
GCTAATGGAGGACTCTTTGTGGCCGACGAGGTTCAGACTGGCTTCGGGCG
AACCGGTGAGCACTTCTGGGGCTTCGAGAGCCACGACTATGTCCCCGACA
TAGTCACCATGGCCAAGGGCATTGGGAACGGCTTCCCACTGGCAGCCGTT
GTCACCACGCCAGAGATCGCGGCATCCCTGAGCCAGGCCCTGCATTTTAA
CACTTACGGGGGGAACCCGATGGCCAGTGCCGTGGGCATTGCCGTGCTGG
ACGTGATCGAGGAGGAGCAACTGCAGCGCAACTCCCTTGAAGTGGGCACG
TACTTCCTCAAAGGTCTGGCTGAATTGCAGCAGCGCTTCGAGATTATTGG
CGACGTGCGGGGAAAAGGCCTGATGATCGGCGTCGAGCTGGTGGGCAATC
GTGAAAAGCGTACCCCTCTGGCTACGCCCCACGTCCTGGACATCTGGGAG
AAGTGCAAGGACCAAGGAGTGCTCCTTGGACGCGGCGGTCTTCATGGAAA
CGTGCTGAGCATGAGACCGCCACTGTGTCTTTGTGCCGAAGACGTGGAAT
TTGCCCTGGAGACACTGGAGGAAGCGTTTAAATTTCATATGAGCAAGAGC
CCTCGCAGTTGGAGAAACAGCACAATGATGATGTAGAAAAGTTGTACTTT
AGAGCTCATTTATTTGCTTATTCGCTTACAAACTAATAATTGAACAACAT
TATAGAGCAGCATTATGACCAACAATCGAGTCTTCGAGCTAGCGGTCTTT
GAGCGAGGCTTTGACTTATTTATAAATGTACATCTCAGGAATTCTTAGAA
GTAATGTGTGATGTGAAGCATGACACACCCTCATACAGTTTTAGGGAACG
AGTGTGATTTGAATCCGTATCTGCTAAGGCTAGCTTAATGTTTGGTTTCA
ATGGCATTGCCTTGAGCATAAATAAATAAAACAACTCGAAAAAAAAAAAA
AAAAAA

IP18034.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11241-RB 2136 CG11241-RB 149..2136 1..1988 9940 100 Plus
CG11241-RA 2155 CG11241-RA 180..1741 1..1562 7780 99.8 Plus
nc_14206.a 1275 nc_14206.a 860..1187 149..476 1640 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 22723810..22724886 1553..477 5385 100 Minus
chr3L 24539361 chr3L 22722055..22722491 1988..1552 2185 100 Minus
chr3L 24539361 chr3L 22725345..22725671 476..150 1635 100 Minus
chr3L 24539361 chr3L 22727151..22727301 151..1 755 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:34:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22734907..22735983 1553..477 5385 100 Minus
3L 28110227 3L 22733148..22733588 1992..1552 2205 100 Minus
3L 28110227 3L 22736442..22736768 476..150 1635 100 Minus
3L 28110227 3L 22738248..22738398 151..1 755 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 22728007..22729083 1553..477 5385 100 Minus
3L 28103327 3L 22726248..22726688 1992..1552 2205 100 Minus
3L 28103327 3L 22729542..22729868 476..150 1635 100 Minus
3L 28103327 3L 22731348..22731498 151..1 755 100 Minus
Blast to na_te.dros performed on 2019-03-15 23:12:18 has no hits.

IP18034.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:13:24 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 22727151..22727301 1..151 100   Minus
chr3L 22722055..22722491 1552..1988 100 <- Minus
chr3L 22723812..22724886 477..1551 100 <- Minus
chr3L 22725345..22725669 152..476 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:11:06 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 1..1557 130..1686 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:08:08 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 1..1557 130..1686 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:29 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 1..1557 130..1686 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:54:37 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 1..1557 130..1686 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:22:54 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 1..1557 130..1686 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:05:23 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 20..1705 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:08:08 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 20..2007 1..1988 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:29 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 23..2010 1..1988 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:54:37 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 20..1705 1..1686 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:22:54 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
CG11241-RB 23..2010 1..1988 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:24 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22733152..22733588 1552..1988 100 <- Minus
3L 22734909..22735983 477..1551 100 <- Minus
3L 22736442..22736766 152..476 100 <- Minus
3L 22738248..22738398 1..151 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:24 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22733152..22733588 1552..1988 100 <- Minus
3L 22734909..22735983 477..1551 100 <- Minus
3L 22736442..22736766 152..476 100 <- Minus
3L 22738248..22738398 1..151 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:24 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22733152..22733588 1552..1988 100 <- Minus
3L 22734909..22735983 477..1551 100 <- Minus
3L 22736442..22736766 152..476 100 <- Minus
3L 22738248..22738398 1..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:29 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22726252..22726688 1552..1988 100 <- Minus
arm_3L 22728009..22729083 477..1551 100 <- Minus
arm_3L 22729542..22729866 152..476 100 <- Minus
arm_3L 22731348..22731498 1..151 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:23 Download gff for IP18034.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22731348..22731498 1..151 100   Minus
3L 22726252..22726688 1552..1988 100 <- Minus
3L 22728009..22729083 477..1551 100 <- Minus
3L 22729542..22729866 152..476 100 <- Minus

IP18034.pep Sequence

Translation from 129 to 1685

> IP18034.pep
MISKRVLAQTRQLLPRSSVRRSSSSSVHSKAAPAMIAQMQGEMPDCNHRP
AAYEGSTYEQILKTRRNHLTPNLLAHFKKPLVIHAGHMQWLYDHEGRRYL
DMFGGIVTVSVGHCHPKVNQALSEQTAKLWHTTNIYMHPKIHEYAERLVA
KFPGDLKSVCFVNSGSEANDLAMLMARLYTGNQDILSLRNCYHGMSPYTM
GLTAHSTWRFPLPGVNSGLVHVMNPDPYQGIWGGSNCRDSPVQTTRKCQC
TVGCQAGDAYYNELEETFKYSLPRGKVAAMFAESIQGVGGTVQFPKGYLK
RAAALVRANGGLFVADEVQTGFGRTGEHFWGFESHDYVPDIVTMAKGIGN
GFPLAAVVTTPEIAASLSQALHFNTYGGNPMASAVGIAVLDVIEEEQLQR
NSLEVGTYFLKGLAELQQRFEIIGDVRGKGLMIGVELVGNREKRTPLATP
HVLDIWEKCKDQGVLLGRGGLHGNVLSMRPPLCLCAEDVEFALETLEEAF
KFHMSKSPRSWRNSTMMM*

IP18034.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23448-PA 466 GF23448-PA 1..464 43..506 2194 84.5 Plus
Dana\GF19062-PA 495 GF19062-PA 1..447 43..500 758 38.8 Plus
Dana\Oat-PA 432 GF10718-PA 54..429 80..500 380 27.5 Plus
Dana\GF10831-PA 486 GF10831-PA 72..435 90..441 179 23.3 Plus
Dana\GF10832-PA 326 GF10832-PA 100..324 263..501 151 28.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13171-PA 502 GG13171-PA 1..494 1..500 2484 91 Plus
Dere\GG13754-PA 494 GG13754-PA 12..447 52..500 759 39.3 Plus
Dere\GG13385-PA 430 GG13385-PA 52..411 80..484 368 29.3 Plus
Dere\GG13352-PA 486 GG13352-PA 71..435 89..441 181 22.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14768-PA 503 GH14768-PA 1..501 1..506 2246 79.9 Plus
Dgri\GH17687-PA 495 GH17687-PA 22..447 62..500 756 39.1 Plus
Dgri\GH14619-PA 433 GH14619-PA 55..414 80..484 365 28.3 Plus
Dgri\GH24027-PA 433 GH24027-PA 55..414 80..484 362 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG11241-PC 518 CG11241-PC 1..518 1..518 2752 100 Plus
CG11241-PB 518 CG11241-PB 1..518 1..518 2752 100 Plus
CG11241-PA 508 CG11241-PA 1..496 1..496 2577 97.4 Plus
CG8745-PA 494 CG8745-PA 12..463 52..516 731 37.9 Plus
Oat-PA 431 CG8782-PA 53..412 80..484 355 28.4 Plus
Gabat-PD 486 CG7433-PD 72..435 90..441 171 23.3 Plus
Gabat-PC 486 CG7433-PC 72..435 90..441 171 23.3 Plus
Gabat-PA 486 CG7433-PA 72..435 90..441 171 23.3 Plus
Gabat-PB 486 CG7433-PB 72..435 90..441 171 23.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11871-PA 491 GI11871-PA 6..484 24..501 2207 83.5 Plus
Dmoj\GI21508-PA 506 GI21508-PA 20..447 60..500 764 39.1 Plus
Dmoj\GI13506-PA 431 GI13506-PA 53..412 80..484 380 28.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18115-PA 495 GL18115-PA 1..493 1..506 2204 81.3 Plus
Dper\GL14846-PA 302 GL14846-PA 8..254 257..500 533 44.1 Plus
Dper\GL20876-PA 433 GL20876-PA 55..414 80..484 377 29.4 Plus
Dper\GL14845-PA 194 GL14845-PA 14..154 52..194 246 39.6 Plus
Dper\GL11898-PA 487 GL11898-PA 58..430 70..435 164 23 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10859-PA 509 GA10859-PA 1..507 1..506 2321 85 Plus
Dpse\GA26338-PA 497 GA26338-PA 14..449 52..500 777 39.3 Plus
Dpse\GA21318-PA 433 GA21318-PA 55..414 80..484 380 29.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22081-PA 508 GM22081-PA 1..500 1..500 2468 92.6 Plus
Dsec\GM24577-PA 515 GM24577-PA 12..279 52..334 407 36.5 Plus
Dsec\GM16950-PA 431 GM16950-PA 53..412 80..484 369 28.9 Plus
Dsec\GM14750-PA 486 GM14750-PA 71..435 89..441 182 22.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12056-PA 508 GD12056-PA 1..500 1..500 2481 92.8 Plus
Dsim\GD12648-PA 494 GD12648-PA 12..441 52..493 759 39.6 Plus
Dsim\GD12233-PA 486 GD12233-PA 71..435 89..441 181 22.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13565-PA 503 GJ13565-PA 1..501 1..506 2269 82.1 Plus
Dvir\GJ19045-PA 500 GJ19045-PA 22..447 62..500 745 39.3 Plus
Dvir\GJ11867-PA 433 GJ11867-PA 55..414 80..484 364 28.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20568-PA 495 GK20568-PA 1..490 1..502 2090 75.9 Plus
Dwil\GK24849-PA 495 GK24849-PA 9..447 49..500 772 38.9 Plus
Dwil\GK25792-PA 428 GK25792-PA 50..425 80..500 381 27.9 Plus
Dwil\GK20289-PA 474 GK20289-PA 252..472 264..501 172 26.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19492-PA 474 GE19492-PA 1..466 35..500 2364 92.1 Plus
Dyak\GE20050-PA 494 GE20050-PA 12..441 52..493 752 39.1 Plus
Dyak\GE22477-PA 430 GE22477-PA 52..411 80..484 372 29.5 Plus
Dyak\GE22444-PA 486 GE22444-PA 71..435 89..441 181 22.6 Plus

IP18034.hyp Sequence

Translation from 129 to 1685

> IP18034.hyp
MISKRVLAQTRQLLPRSSVRRSSSSSVHSKAAPAMIAQMQGEMPDCNHRP
AAYEGSTYEQILKTRRNHLTPNLLAHFKKPLVIHAGHMQWLYDHEGRRYL
DMFGGIVTVSVGHCHPKVNQALSEQTAKLWHTTNIYMHPKIHEYAERLVA
KFPGDLKSVCFVNSGSEANDLAMLMARLYTGNQDILSLRNCYHGMSPYTM
GLTAHSTWRFPLPGVNSGLVHVMNPDPYQGIWGGSNCRDSPVQTTRKCQC
TVGCQAGDAYYNELEETFKYSLPRGKVAAMFAESIQGVGGTVQFPKGYLK
RAAALVRANGGLFVADEVQTGFGRTGEHFWGFESHDYVPDIVTMAKGIGN
GFPLAAVVTTPEIAASLSQALHFNTYGGNPMASAVGIAVLDVIEEEQLQR
NSLEVGTYFLKGLAELQQRFEIIGDVRGKGLMIGVELVGNREKRTPLATP
HVLDIWEKCKDQGVLLGRGGLHGNVLSMRPPLCLCAEDVEFALETLEEAF
KFHMSKSPRSWRNSTMMM*

IP18034.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:51:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11241-PC 518 CG11241-PC 1..518 1..518 2752 100 Plus
CG11241-PB 518 CG11241-PB 1..518 1..518 2752 100 Plus
CG11241-PA 508 CG11241-PA 1..496 1..496 2577 97.4 Plus
CG8745-PA 494 CG8745-PA 12..463 52..516 731 37.9 Plus
Oat-PA 431 CG8782-PA 53..412 80..484 355 28.4 Plus