Clone IP18415 Report

Search the DGRC for IP18415

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:184
Well:15
Vector:pOT2
Associated Gene/TranscriptCG34302-RB
Protein status:IP18415.pep: gold
Sequenced Size:1782

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34302 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP18415.complete Sequence

1782 bp assembled on 2007-01-16

GenBank Submission: BT030269

> IP18415.complete
AAAATATCTAACCTCAAGCGAAGCGATTGATGGCTTGAAAATGCGCAAAT
TGGAAGGAAGGGCTCCACTTGGAGGAGCAATTGAGAGAACAACGAGCTTA
ACAAGCTGCCAGAGCACCGGGGGCGCTTTTTGTTTCCAACTGTCCTGGCT
GGTCCTCCTCCTCCACCACCTGCGCTGCGGATGAGGAGGAACAAAGCGGC
AGGTAGTTGGCACTTCAATTGAACACATTAATGTGTCACTTTCGTCGGAT
CTCGGAGCGAGTTTCGGTGCGTCGGCAATGCCATAAATCAACACCCACCC
CGTCCATCGCCATGGAGAGCTATCGATTAGCCGGGCTCCAACCTTCGGAT
TGGAGGCGTCAGGCAAATGGCATGGGCCAGGAGGGTGACACGAGGATTGG
GGGGCAGGCGGATTGAGCCATGAGGCGTGCTGCTGCAATGAGTGCGACCA
CCAAAACCTGGACAGGTAGTTCTCCTCGCACCGTGGGCCTCAAATTTATG
AACTTGACTTTCGGTTAGCTAACAGCCATCAGCCAACGTTGGGTGGCCCC
TCCATCCGGCCCAGGCCTCTCGTCATTGGTTCCGGCCAGACACGAACGGG
TATGAAAAGGTTCGCATGACTGCAGGAAATTACCATAATTTCAATTTAAC
AAATTAAACGAATTCCGTTCTGAGCTGGAGAAAAAAAAGAGAGCAGCGTC
GGCCTCCAAAAGAGTTAAGGTTTAAGAAGTCCTTGCTTTGGGAGCTGAAG
ATTTTTACAGCTGATAAATGTGGATGAATTCACCTGACAAAATGGGTGGA
AAACTACTTGCCGGCGGAGGGGGAACTTTTTTATTTCAATTACTTGATGG
AAAAGATGTGTAATTTGTATTTACACAAAAATTGCAGGCACTGCTAAATT
ACTATTAAAAATATAACCGTGCCAAAAATATTTTTTAACGGTCAATCAAG
TTTTTGATTTGCATTCAAAAACAATAGGGACTAAAATTCCAATAAGAAAC
CATTGTAAAGGTGTTAACCCTATTTTAGAGATTTCATTTATCGAACTTTT
TTGAGGTTACGCAAAAAAGTGGCCCGTTTTCAAGACTATCGAAGTGACAG
AGAACATTTCGCAGGGAGTTGCATTTGCTAAAGACCTGCCAGCGATTAAC
ACGATGGATCCACTCCGCCGTAATCCTCTTTTGGAAATTACCAAATGTGA
GATGTGCTCCAATTTGGTATACCATTTTCCGACTGGATTGTGTGCCCGCT
GCTTAACTCTTTGGGCCGGAAAGAAACCAATGGACGGACTGAGACTGACC
GTGGACCAATCGAAGGCTTTCCTTGTGAACATTGCTCGCTGTTCGGATGC
CCAGGATAAGAGCCATATGGACCCCACCTTTCAACGCGTGATTGCCGAGG
TGAGATTGCAGCGCCAACAGAAACTTGAGCTGTTCCAGAAGATTCGCCAG
CAGTTACAGCTTTCCGTACTCACCGGTTCCTTCTATGACAAAAATCCAAA
ATACGAAGTCAATGAGGACTATTGGAATATACCGGATATCGTCGATGCAG
ACATGCTGATGTTTCAGAAAAATATTGACCTGCTTGCAGATATACCCACC
ATTTCGTCAGAGATCAATGACGAAAATAAATACAATAAGCGCGAAAATAG
AAAACGAAATTTGTAGCTGCTATCCACTTTTAATACAAAAGAAAGTACAA
ATATTTCTGAGAAATATACATATAAATGATAACGTGATATAATAAAGTAT
TTATACACCTTTTGGTAAAAAAAAAAAAAAAA

IP18415.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-RB 1793 CG34302-RB 28..1793 1..1766 8830 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5648825..5650569 1766..22 8725 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:36:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:12:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9822996..9824743 1769..22 8740 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9563827..9565574 1769..22 8740 100 Minus
Blast to na_te.dros performed 2019-03-15 18:12:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Newton 1510 Dbuz\Newton NEWTON 1510bp 719..827 893..1003 144 64.9 Plus

IP18415.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:13:16 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5648825..5650567 24..1766 100 <- Minus
chr3R 5650668..5650690 1..23 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:12:38 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RA 45..657 1054..1666 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:09:45 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..513 1154..1666 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:55:48 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..513 1154..1666 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:19:56 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RA 45..657 1054..1666 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:55:20 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..513 1154..1666 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:38:42 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RA 45..657 1054..1666 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:09:45 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..825 942..1766 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:55:48 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..825 942..1766 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:19:57 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RA 45..657 1054..1666 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:55:20 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
CG34302-RB 1..825 942..1766 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:13:16 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9822999..9824741 24..1766 100 <- Minus
3R 9824842..9824864 1..23 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:13:16 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9822999..9824741 24..1766 100 <- Minus
3R 9824842..9824864 1..23 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:13:16 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9822999..9824741 24..1766 100 <- Minus
3R 9824842..9824864 1..23 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:55:48 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5650564..5650586 1..23 100   Minus
arm_3R 5648721..5650463 24..1766 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:42:05 Download gff for IP18415.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9563830..9565572 24..1766 100 <- Minus
3R 9565673..9565695 1..23 100   Minus

IP18415.pep Sequence

Translation from 1153 to 1665

> IP18415.pep
MDPLRRNPLLEITKCEMCSNLVYHFPTGLCARCLTLWAGKKPMDGLRLTV
DQSKAFLVNIARCSDAQDKSHMDPTFQRVIAEVRLQRQQKLELFQKIRQQ
LQLSVLTGSFYDKNPKYEVNEDYWNIPDIVDADMLMFQKNIDLLADIPTI
SSEINDENKYNKRENRKRNL*

IP18415.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17146-PA 173 GF17146-PA 8..159 7..158 280 35.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:07:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17317-PA 171 GG17317-PA 1..169 1..169 647 69.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14180-PA 107 GH14180-PA 7..105 7..106 181 38 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-PB 170 CG34302-PB 1..170 1..170 896 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:07:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22090-PA 146 GI22090-PA 1..104 1..106 210 37.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:07:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23221-PA 199 GL23221-PA 5..159 6..165 272 37.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:07:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27195-PA 248 GA27195-PA 5..159 6..165 261 36 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26202-PA 159 GM26202-PA 1..158 1..158 719 84.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:07:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20750-PA 238 GD20750-PA 1..155 1..169 642 72.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24205-PA 147 GJ24205-PA 1..145 1..141 231 32 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24719-PA 170 GE24719-PA 1..170 1..170 649 70.6 Plus

IP18415.hyp Sequence

Translation from 1153 to 1665

> IP18415.hyp
MDPLRRNPLLEITKCEMCSNLVYHFPTGLCARCLTLWAGKKPMDGLRLTV
DQSKAFLVNIARCSDAQDKSHMDPTFQRVIAEVRLQRQQKLELFQKIRQQ
LQLSVLTGSFYDKNPKYEVNEDYWNIPDIVDADMLMFQKNIDLLADIPTI
SSEINDENKYNKRENRKRNL*

IP18415.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:47:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG34302-PB 170 CG34302-PB 1..170 1..170 896 100 Plus