IP18705.complete Sequence
655 bp assembled on 2007-01-15
GenBank Submission: BT030296
> IP18705.complete
AAATGTCGGGGAACCTGGCTCAAATCCTGTTGCTGCTGTGTGAATCTGCG
GGCGGGATGCTTTTTCATGGCGCTTTTCGAGATTTTCGCATCGATCCTGG
GGTTCTTTGTTGGCGAAGGTAAGCAGAGATGGTCGTCTGTTAGTAATTAG
CAGAGCTGCCTATATGGTGCACTTTTTTGGATCGATTTTTCTGATGATGA
GCAGTATCTTGATCGAATTTCTGGTGATCATCTATCTGGTAACAGATATA
ATCCACCTGATCTTTTGTAGCCCCTTTATAATCAATTATGCGTTAAGTTG
TAGCTTCTGCACTCTAGAATCGATTCCTGTATTCTTCACCCTAGCTTTTA
GCCTTTATTTTTGGATAGTGGCATTTTTCTACTGGCGACGCCTTCTCTGG
GAACACAATCCCGAAAACGACGACTGAGGCGAAGGGGTATCGTTAATTCT
GGATCTTGAGTGTTTATTCTGCGCTCTTGTGTTGGTTTTTGCGCTATGTA
CGCTATTTTCTGTTTTGGCCCTAATTTCACACTAATTTGTAAATTTGCCT
TTAATGCCAAAGACAAAGAGAAAAACGAAAAGAGCAAAGTTCCGCAAATT
GTTTGTACAGAGAAATATATTTTGTATTCATCACTAAAAAAAAAAAAAAA
AAAAA
IP18705.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:04:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34300.a | 861 | CG34300.a | 182..817 | 1..636 | 3180 | 100 | Plus |
CG34300.b | 803 | CG34300.b | 282..794 | 127..636 | 2495 | 99.4 | Plus |
CG34300.b | 803 | CG34300.b | 166..283 | 1..118 | 590 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:58:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 26128296..26128588 | 635..343 | 1465 | 100 | Minus |
chr3R | 27901430 | chr3R | 26128647..26128780 | 344..211 | 655 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 26128998..26129125 | 128..1 | 610 | 98.4 | Minus |
chr3R | 27901430 | chr3R | 26128836..26128920 | 211..127 | 395 | 97.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:37:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:58:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30305807..30306100 | 636..343 | 1470 | 100 | Minus |
3R | 32079331 | 3R | 30306159..30306292 | 344..211 | 670 | 100 | Minus |
3R | 32079331 | 3R | 30306510..30306637 | 128..1 | 640 | 100 | Minus |
3R | 32079331 | 3R | 30306348..30306432 | 211..127 | 425 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:59:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 30046638..30046931 | 636..343 | 1470 | 100 | Minus |
3R | 31820162 | 3R | 30046990..30047123 | 344..211 | 670 | 100 | Minus |
3R | 31820162 | 3R | 30047341..30047468 | 128..1 | 640 | 100 | Minus |
3R | 31820162 | 3R | 30047179..30047263 | 211..127 | 425 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 03:58:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 809..842 | 591..558 | 107 | 79.4 | Minus |
IP18705.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:59:16 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 26128998..26129125 | 1..128 | 98 | | Minus |
chr3R | 26128296..26128586 | 345..635 | 100 | <- | Minus |
chr3R | 26128647..26128779 | 212..344 | 99 | <- | Minus |
chr3R | 26128836..26128918 | 129..211 | 97 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:13:13 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:03:59 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:09:52 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:05:08 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:20:36 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:29:42 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:03:59 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RB | 1..635 | 1..635 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:09:52 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RB | 1..635 | 1..635 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:05:10 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RA | 4..423 | 1..427 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:20:36 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34300-RB | 1..635 | 1..635 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:16 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30305808..30306098 | 345..635 | 100 | <- | Minus |
3R | 30306159..30306291 | 212..344 | 100 | <- | Minus |
3R | 30306348..30306430 | 129..211 | 100 | <- | Minus |
3R | 30306510..30306637 | 1..128 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:16 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30305808..30306098 | 345..635 | 100 | <- | Minus |
3R | 30306159..30306291 | 212..344 | 100 | <- | Minus |
3R | 30306348..30306430 | 129..211 | 100 | <- | Minus |
3R | 30306510..30306637 | 1..128 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:16 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30305808..30306098 | 345..635 | 100 | <- | Minus |
3R | 30306159..30306291 | 212..344 | 100 | <- | Minus |
3R | 30306348..30306430 | 129..211 | 100 | <- | Minus |
3R | 30306510..30306637 | 1..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:09:52 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26131530..26131820 | 345..635 | 100 | <- | Minus |
arm_3R | 26131881..26132013 | 212..344 | 100 | <- | Minus |
arm_3R | 26132070..26132152 | 129..211 | 100 | <- | Minus |
arm_3R | 26132232..26132359 | 1..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:38:08 Download gff for
IP18705.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30046639..30046929 | 345..635 | 100 | <- | Minus |
3R | 30046990..30047122 | 212..344 | 100 | <- | Minus |
3R | 30047179..30047261 | 129..211 | 100 | <- | Minus |
3R | 30047341..30047468 | 1..128 | 100 | | Minus |
IP18705.pep Sequence
Translation from 163 to 426
> IP18705.pep
MVHFFGSIFLMMSSILIEFLVIIYLVTDIIHLIFCSPFIINYALSCSFCT
LESIPVFFTLAFSLYFWIVAFFYWRRLLWEHNPENDD*
IP18705.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:30:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16186-PA | 97 | GF16186-PA | 46..97 | 36..87 | 169 | 57.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34300-PB | 87 | CG34300-PB | 1..87 | 1..87 | 469 | 100 | Plus |
CG34300-PA | 140 | CG34300-PA | 53..140 | 1..87 | 457 | 98.9 | Plus |
IP18705.hyp Sequence
Translation from 163 to 426
> IP18705.hyp
MVHFFGSIFLMMSSILIEFLVIIYLVTDIIHLIFCSPFIINYALSCSFCT
LESIPVFFTLAFSLYFWIVAFFYWRRLLWEHNPENDD*
IP18705.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:49:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34300-PB | 87 | CG34300-PB | 1..87 | 1..87 | 469 | 100 | Plus |
CG34300-PA | 140 | CG34300-PA | 53..140 | 1..87 | 457 | 98.9 | Plus |