Clone IP19005 Report

Search the DGRC for IP19005

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:190
Well:5
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG13083-RB
Protein status:IP19005.pep: gold
Sequenced Size:1169

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13083 2008-04-29 Release 5.5 accounting
CG13083 2008-05-05 Release 5.5 slip selected
CG13083 2008-08-15 Release 5.9 accounting
CG13083 2008-12-18 5.12 accounting

Clone Sequence Records

IP19005.complete Sequence

1169 bp assembled on 2007-11-15

GenBank Submission: BT031206

> IP19005.complete
CACTCAGCGGGGAGCGGCCATCAGAGAAACACCATGAGAGTGCGACTGAC
TTTGCTAACGATATGCATTTACCTATGCGCGGCTGCAGCTGAGGATCTGG
ACTCCATCCATGAGATCCGCAGTGAGGTGGAGGAGCTGATCAAAGGTACG
GAGGAGCTAAACCATGGGCTGCAGAAAGTGAAGGACGTGCAGAAGGGCAT
TGAAGAGAAGTTCAAGCATCAGCGCGACGAGATCGAACTCATTGCTGGAT
TGGAGGTTGCCATAGCCAAGCTGGAATCGAACGTTCAAAGCAGCTTCCAA
GCCACGGCCTCTGGAGTGGGAAATTTGACAGCCATTGTTAACGCAATCCA
GGGTCAGAATGAAAACTCTATTAGGAATCTTACCAAAGTGGAGCTAGAAA
TCAGGAAAGCCCTGGAACAAGTGGCTGCCAATCAGAACAAATACGAGCAG
AACCTAAATGAAGTGGCCTCATCCGTCAACTCGCATCTGTCGGAGATTCA
GCAGCTGCTATCACAGGCCGTCATAGGGGAACTCATCGGCTTGGACAATA
AAGCGAAGGTCCTCCAGGAGCAGCAGCGCAACATCGTGGGTCAAGTGGGA
TATCTGGGCGAACTTAAGGCTCTGGCAGATCGTGCCAATCGCAAAGTCAA
TCAATTGGAGTGGGGTCTGGTCATTCTCAACCGCACTCAGTCCGAGAGCC
TCAACAGCATCGAGCACACTGTCCATGGAGTGCAGGTGGCCACCTCACAG
GTCGATCATAAACTGGCTGCCCTACTGAACAATCAGAAGAACATTGAAAG
GACGCTGGATGGCTGCAAGCACAAAAATCCGTCACACCAGAAGCCCCACG
AGATCTGGACTCACCCGGAACACGCACCAATTTACAAGCCAAAACCAGAG
GGCAATCAAGGATACGAGAACGTCTATGCATCCCAAGAAGAGGCTGAATA
CCTATACAAACTTTGGTATGGAAAGGGCCAGTAGCATTAATACGAAAACT
GAAGATAGATGTTTTATGCCATATTCAGAAATTGCTTGATTTCCTATATC
AAATCCCAGCATGTCGATTCTATCTATCTTATATAATTGTATATTAAACC
GTTCTGTAACACAATGTAATAAACAAGAGTAAATGGAGGAAATCAAAAAA
AAAAAAAAAAAAAAAAAAA

IP19005.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13083.a 1369 CG13083.a 226..1369 1..1144 5720 100 Plus
CG13083-RB 1194 CG13083-RB 51..1194 1..1144 5720 100 Plus
CG13083-RA 925 CG13083-RA 1..561 34..594 2805 100 Plus
CG13083-RA 925 CG13083-RA 558..925 687..1054 1825 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:38:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19486030..19486917 1..888 4425 99.9 Plus
chr2L 23010047 chr2L 19486974..19487230 888..1144 1270 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:37:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19487491..19488378 1..888 4440 100 Plus
2L 23513712 2L 19488435..19488691 888..1144 1285 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:30:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19487491..19488378 1..888 4440 100 Plus
2L 23513712 2L 19488435..19488691 888..1144 1285 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:38:27 has no hits.

IP19005.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:39:17 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19486030..19486916 1..887 99 -> Plus
chr2L 19486974..19487230 888..1144 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:13:35 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:02:44 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:10:01 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:48:09 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:22:48 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:50:39 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:02:44 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 2..1145 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:10:01 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 2..1145 1..1144 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:48:09 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 1..951 34..984 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:22:48 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
CG13083-RB 2..1145 1..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:39:17 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19487491..19488377 1..887 100 -> Plus
2L 19488435..19488691 888..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:39:17 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19487491..19488377 1..887 100 -> Plus
2L 19488435..19488691 888..1144 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:39:17 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19487491..19488377 1..887 100 -> Plus
2L 19488435..19488691 888..1144 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:10:01 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19487491..19488377 1..887 100 -> Plus
arm_2L 19488435..19488691 888..1144 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:54:42 Download gff for IP19005.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19487491..19488377 1..887 100 -> Plus
2L 19488435..19488691 888..1144 100   Plus

IP19005.hyp Sequence

Translation from 0 to 983

> IP19005.hyp
HSAGSGHQRNTMRVRLTLLTICIYLCAAAAEDLDSIHEIRSEVEELIKGT
EELNHGLQKVKDVQKGIEEKFKHQRDEIELIAGLEVAIAKLESNVQSSFQ
ATASGVGNLTAIVNAIQGQNENSIRNLTKVELEIRKALEQVAANQNKYEQ
NLNEVASSVNSHLSEIQQLLSQAVIGELIGLDNKAKVLQEQQRNIVGQVG
YLGELKALADRANRKVNQLEWGLVILNRTQSESLNSIEHTVHGVQVATSQ
VDHKLAALLNNQKNIERTLDGCKHKNPSHQKPHEIWTHPEHAPIYKPKPE
GNQGYENVYASQEEAEYLYKLWYGKGQ*

IP19005.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG13083-PB 316 CG13083-PB 1..316 12..327 1605 100 Plus
CG13084-PA 454 CG13084-PA 1..308 12..317 212 22.7 Plus

IP19005.pep Sequence

Translation from 33 to 983

> IP19005.pep
MRVRLTLLTICIYLCAAAAEDLDSIHEIRSEVEELIKGTEELNHGLQKVK
DVQKGIEEKFKHQRDEIELIAGLEVAIAKLESNVQSSFQATASGVGNLTA
IVNAIQGQNENSIRNLTKVELEIRKALEQVAANQNKYEQNLNEVASSVNS
HLSEIQQLLSQAVIGELIGLDNKAKVLQEQQRNIVGQVGYLGELKALADR
ANRKVNQLEWGLVILNRTQSESLNSIEHTVHGVQVATSQVDHKLAALLNN
QKNIERTLDGCKHKNPSHQKPHEIWTHPEHAPIYKPKPEGNQGYENVYAS
QEEAEYLYKLWYGKGQ*

IP19005.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:17:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14239-PA 292 GF14239-PA 1..285 1..315 702 48.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:17:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21186-PA 284 GG21186-PA 1..284 1..316 1145 72.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:17:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11105-PA 340 GH11105-PA 1..337 1..314 384 32.6 Plus
Dgri\GH11104-PA 441 GH11104-PA 1..278 1..277 190 24.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG13083-PB 316 CG13083-PB 1..316 1..316 1605 100 Plus
CG13084-PA 454 CG13084-PA 1..308 1..306 212 22.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18227-PA 317 GI18227-PA 55..314 28..314 366 33.2 Plus
Dmoj\GI18226-PA 443 GI18226-PA 1..262 1..268 166 22 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:17:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21216-PA 319 GL21216-PA 1..316 1..314 720 50.8 Plus
Dper\GL21215-PA 502 GL21215-PA 1..298 1..294 180 26.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12033-PA 319 GA12033-PA 1..316 1..314 728 51.1 Plus
Dpse\GA12034-PA 502 GA12034-PA 1..298 1..294 183 26.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17353-PA 284 GM17353-PA 1..284 1..316 1309 82.9 Plus
Dsec\GM17352-PA 447 GM17352-PA 1..308 1..306 165 23.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:17:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24211-PA 284 GD24211-PA 1..284 1..316 1363 85.8 Plus
Dsim\GD24210-PA 454 GD24210-PA 1..308 1..306 168 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:17:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18135-PA 345 GJ18135-PA 44..342 28..314 467 39.6 Plus
Dvir\GJ18134-PA 447 GJ18134-PA 1..302 1..303 193 23.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:17:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18185-PA 317 GK18185-PA 1..316 1..314 607 45.2 Plus
Dwil\GK24677-PA 292 GK24677-PA 1..291 1..284 464 37.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:17:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13259-PA 286 GE13259-PA 1..284 1..316 1294 80.7 Plus