IP19010.complete Sequence
498 bp assembled on 2007-08-02
GenBank Submission: BT030859
> IP19010.complete
ATCACAACCTGAATTTCCACTAAGCAAAGCCGAACTGCCAGAGAGAAAAT
GCGTTCCTTCATTCTGATTGCCCTCTTCGCCCTGATTGCCCTGGCTGCTG
CTCAAGGCGGACCACAAGGTGGACAGCAGGGTGGGCAAGGAGGATCTCAA
AATGGTCAGCAAGGAGGCCAGCAGGGAGGCTCCCAGGAAGGATCCCAGGA
AGGATCCCAGGAAGGACAACAGGGAGGTCAGCAGGGAGGTCAGCAGCAGG
GTGGTCCTGGCGGTCCATGGGGTCTGCCTCCGAATGGAACTGAACTCTCC
AACAGTACCACAACTTCGACCACTGAGGCTACCAGCACTGAATCCAGCAG
CACAGAGGTTTCCTCTTCGTAACTTATAGATTGATCCTAATGAAAGCGAA
CAGGCTTGCTCAGTTCCTTACCATTCCCTTTATCAATACAAGTTCTTGAA
ATAAATTGATATCAGTACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
IP19010.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:17:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-RA | 446 | CG12506-RA | 1..442 | 29..470 | 2210 | 100 | Plus |
CG13946-RA | 357 | CG13946-RA | 1..157 | 43..199 | 725 | 97.4 | Plus |
CG13946-RA | 357 | CG13946-RA | 130..299 | 196..365 | 610 | 90.5 | Plus |
CG13947-RA | 360 | CG13947-RA | 1..86 | 49..134 | 235 | 84.8 | Plus |
CG13946-RA | 357 | CG13946-RA | 115..180 | 169..234 | 195 | 86.3 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:28:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 773414..773883 | 1..470 | 2350 | 100 | Plus |
chr2L | 23010047 | chr2L | 776395..776693 | 43..365 | 945 | 87.6 | Plus |
chr2L | 23010047 | chr2L | 779053..779148 | 39..134 | 240 | 83.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:37:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:28:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 773547..774016 | 1..470 | 2350 | 100 | Plus |
2L | 23513712 | 2L | 776536..776834 | 43..365 | 975 | 88.2 | Plus |
2L | 23513712 | 2L | 779194..779289 | 39..134 | 240 | 83.3 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:34:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 773547..774016 | 1..470 | 2350 | 100 | Plus |
2L | 23513712 | 2L | 776536..776692 | 43..199 | 725 | 97.4 | Plus |
2L | 23513712 | 2L | 776665..776834 | 196..365 | 610 | 90.5 | Plus |
2L | 23513712 | 2L | 779194..779289 | 39..134 | 240 | 83.3 | Plus |
2L | 23513712 | 2L | 776650..776715 | 169..234 | 195 | 86.3 | Plus |
Blast to na_te.dros performed on 2019-03-15 19:28:05 has no hits.
IP19010.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:29:08 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 773414..773593 | 1..180 | 100 | == | Plus |
chr2L | 773660..773883 | 247..470 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:13:37 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..324 | 49..372 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:25:41 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..324 | 49..372 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:57:32 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..324 | 49..372 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:09:43 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..324 | 49..372 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:00:41 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..324 | 49..372 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:31:09 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..442 | 29..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:25:40 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..442 | 29..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:57:32 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..470 | 1..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:09:44 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..442 | 29..470 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:00:41 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12506-RA | 1..470 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:08 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 773547..774016 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:08 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 773547..774016 | 1..470 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:08 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 773547..774016 | 1..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:57:32 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 773547..774016 | 1..470 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:57:50 Download gff for
IP19010.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 773547..774016 | 1..470 | 100 | | Plus |
IP19010.pep Sequence
Translation from 48 to 371
> IP19010.pep
MRSFILIALFALIALAAAQGGPQGGQQGGQGGSQNGQQGGQQGGSQEGSQ
EGSQEGQQGGQQGGQQQGGPGGPWGLPPNGTELSNSTTTSTTEATSTESS
STEVSSS*
IP19010.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-PA | 107 | CG12506-PA | 1..107 | 1..107 | 550 | 100 | Plus |
CG13946-PA | 99 | CG13946-PA | 1..99 | 1..107 | 465 | 86 | Plus |
CG13947-PA | 119 | CG13947-PA | 1..113 | 1..107 | 361 | 67.3 | Plus |
lcs-PA | 145 | CG12794-PA | 1..128 | 1..107 | 171 | 38 | Plus |
CG10918-PA | 183 | CG10918-PA | 1..143 | 1..107 | 140 | 33.1 | Plus |
IP19010.hyp Sequence
Translation from 48 to 371
> IP19010.hyp
MRSFILIALFALIALAAAQGGPQGGQQGGQGGSQNGQQGGQQGGSQEGSQ
EGSQEGQQGGQQGGQQQGGPGGPWGLPPNGTELSNSTTTSTTEATSTESS
STEVSSS*
IP19010.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:51:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12506-PA | 107 | CG12506-PA | 1..107 | 1..107 | 550 | 100 | Plus |
CG13946-PA | 99 | CG13946-PA | 1..99 | 1..107 | 465 | 86 | Plus |
CG13947-PA | 119 | CG13947-PA | 1..113 | 1..107 | 361 | 67.3 | Plus |
lcs-PA | 145 | CG12794-PA | 1..128 | 1..107 | 171 | 38 | Plus |
CG10918-PA | 183 | CG10918-PA | 1..143 | 1..107 | 140 | 33.1 | Plus |