Clone IP19041 Report

Search the DGRC for IP19041

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:190
Well:41
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG31681-RA
Protein status:IP19041.pep: gold
Sequenced Size:979

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31681 2008-05-05 Release 5.5 slip selected
CG31681 2008-12-18 5.12 accounting

Clone Sequence Records

IP19041.complete Sequence

979 bp assembled on 2008-10-06

GenBank Submission: BT044590.1

> IP19041.complete
ATCGGGAACAGAAGTCAAACAGCTCGATAATGTGCTTAAGGCTTTTACTA
TCTATACTAGTATCAATTGCTGGCCTGGCTTGTGCTGCTCGAATTCCTGG
GCCAGAGGAACGGATTGTCGGAGGTTCATACATCCCCATCGAATATGTTC
CTTGGCAAGTGTCGGTGCAAAATAATTCGTTACATTGCTGTGGTGGAGTC
ATCTACAGTGATCGAGCTATTTTGACTGCCGCTCATTGCCTTTCTAATGT
AACTGTGACGGATCTATCAGTTCGCGCTGGATCTTCGTATTGGAGCAAAG
GTGGTCAGGTGTTAAAGGTGCTAAAGACAATTGCACATCCAAAATACGTG
CCTAAACTTTACAATCCGTATGATATTGCTGTGCTAATTTTGGAGGCACC
TCTCAGACTTGGTGGCACTGTAAAGAAAATTCCTCTAGCCGAACAGACTC
CCGTGGCTGGTACAATTGTTTTGACCTCCGGATGGGGATATACACGAGAG
AACTCTTCATTCCTTTGGCCAATACTGCAAGGCGTACATGTAGCCATTCT
GAATAGAACGGATTGTCTGAAAGCTTACAAGCACGTTAATATAACTATCG
ACATGATCTGTGCCGACGGACAAAGATGGGATACTTGTCAAGGTGATTCC
GGTGGTCCTTTGATTGAAACAACGAAAGGCGGCCATAGGCAACTCATAGG
CATGGTTAGCTGGGGAGACGGTTGTGGTACAAATCCTGGCGTCTACGAAG
ATATTGCATTCTTCCACAACTGGATCAAATATACAGTTAAAAAAAATATT
TACAAAAGTATTGTTAAAATATAATATTTACCTTCACTTAAATAAGTAAA
AAAAACTTGTAACCTTTTGTATTCCTAAAATTATAGGTATGAAAACTTAT
CCATTTTGTTTAGACATCAGAAATGAAATAAAAATGGAATTCTTTTTCCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP19041.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31681-RA 949 CG31681-RA 1..949 1..949 4730 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2285675..2286623 949..1 4670 99.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:37:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2285911..2286873 963..1 4740 99.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2285911..2286873 963..1 4740 99.4 Minus
Blast to na_te.dros performed on 2019-03-16 02:26:41 has no hits.

IP19041.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:27:22 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2285675..2286623 1..949 94   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:13:48 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:13:42 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:08 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:11:00 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:52:42 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:13:42 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..949 1..949 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:08 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..949 1..949 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-06 16:25:58 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..795 30..824 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:11:00 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
CG31681-RA 1..949 1..949 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:27:22 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2285925..2286873 1..949 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:27:22 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2285925..2286873 1..949 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:27:22 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2285925..2286873 1..949 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:08 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2285925..2286873 1..949 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:44:18 Download gff for IP19041.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2285925..2286873 1..949 99   Minus

IP19041.pep Sequence

Translation from 2 to 823

> IP19041.pep
REQKSNSSIMCLRLLLSILVSIAGLACAARIPGPEERIVGGSYIPIEYVP
WQVSVQNNSLHCCGGVIYSDRAILTAAHCLSNVTVTDLSVRAGSSYWSKG
GQVLKVLKTIAHPKYVPKLYNPYDIAVLILEAPLRLGGTVKKIPLAEQTP
VAGTIVLTSGWGYTRENSSFLWPILQGVHVAILNRTDCLKAYKHVNITID
MICADGQRWDTCQGDSGGPLIETTKGGHRQLIGMVSWGDGCGTNPGVYED
IAFFHNWIKYTVKKNIYKSIVKI*

IP19041.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:47:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12402-PA 256 GF12402-PA 1..255 9..264 424 37 Plus
Dana\GF19704-PA 251 GF19704-PA 22..250 36..264 402 38.8 Plus
Dana\GF15291-PA 246 GF15291-PA 9..245 19..264 402 41 Plus
Dana\GF12546-PA 256 GF12546-PA 1..255 15..264 397 40.1 Plus
Dana\GF12545-PA 273 GF12545-PA 3..263 13..264 397 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24533-PA 249 GG24533-PA 1..249 10..266 890 68.5 Plus
Dere\GG16690-PA 252 GG16690-PA 1..252 10..266 889 69.4 Plus
Dere\GG12998-PA 252 GG12998-PA 1..252 10..266 889 69.4 Plus
Dere\epsilonTry-PA 256 GG22660-PA 1..255 9..264 422 37.5 Plus
Dere\GG20864-PA 269 GG20864-PA 1..253 20..262 411 40.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22866-PA 255 GH22866-PA 2..254 14..264 449 40.8 Plus
Dgri\GH22924-PA 256 GH22924-PA 6..249 14..258 448 43 Plus
Dgri\GH22926-PA 256 GH22926-PA 6..249 14..258 437 41.8 Plus
Dgri\GH22925-PA 254 GH22925-PA 6..254 14..263 432 41.2 Plus
Dgri\GH10777-PA 258 GH10777-PA 3..252 13..259 428 40 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG31681-PA 264 CG31681-PA 1..264 10..273 1411 100 Plus
betaTry-PB 253 CG18211-PB 1..249 15..258 454 42.6 Plus
betaTry-PA 253 CG18211-PA 1..249 15..258 454 42.6 Plus
alphaTry-PA 256 CG18444-PA 7..252 14..261 442 41.9 Plus
gammaTry-PA 253 CG30028-PA 7..249 14..258 435 40.8 Plus
CG30025-PA 253 CG30025-PA 7..249 14..258 435 40.8 Plus
deltaTry-PA 253 CG12351-PA 7..249 14..258 435 40.8 Plus
CG30031-PA 253 CG30031-PA 7..249 14..258 435 40.8 Plus
epsilonTry-PA 256 CG18681-PA 6..255 14..264 422 38.4 Plus
CG17571-PB 258 CG17571-PB 3..251 13..258 410 40 Plus
CG17571-PA 258 CG17571-PA 3..251 13..258 410 40 Plus
CG17239-PB 248 CG17239-PB 22..243 36..264 398 41.1 Plus
CG17239-PA 248 CG17239-PA 22..243 36..264 398 41.1 Plus
CG11192-PB 279 CG11192-PB 10..259 19..258 397 40.5 Plus
iotaTry-PA 252 CG7754-PA 27..245 37..258 387 40.1 Plus
Ser12-PA 245 CG17240-PA 1..244 14..264 375 39.5 Plus
Ser8-PA 260 CG4812-PA 1..253 12..258 372 39.2 Plus
lambdaTry-PA 272 CG12350-PA 3..260 13..262 367 37.6 Plus
CG31954-PA 277 CG31954-PA 1..272 9..259 354 36.3 Plus
thetaTry-PA 262 CG12385-PA 3..255 13..258 350 35.4 Plus
CG13430-PB 267 CG13430-PB 31..265 37..264 347 37.3 Plus
CG13430-PA 267 CG13430-PA 31..265 37..264 347 37.3 Plus
CG17234-PA 251 CG17234-PA 24..243 35..258 341 37.5 Plus
Send1-PA 255 CG17012-PA 5..239 11..258 337 37.8 Plus
CG8299-PA 260 CG8299-PA 1..253 10..259 336 36 Plus
CG32374-PA 299 CG32374-PA 73..298 37..264 335 37.3 Plus
CG16998-PA 258 CG16998-PA 1..242 12..258 331 36.1 Plus
CG7829-PA 253 CG7829-PA 9..252 19..265 325 34.5 Plus
Send2-PA 239 CG18125-PA 7..225 14..258 324 38.9 Plus
etaTry-PA 262 CG12386-PA 8..254 15..258 323 36.2 Plus
CG32270-PA 259 CG32270-PA 30..251 37..258 322 35.8 Plus
Try29F-PD 267 CG9564-PD 22..261 18..258 321 37.3 Plus
Try29F-PC 267 CG9564-PC 22..261 18..258 321 37.3 Plus
zetaTry-PA 280 CG12387-PA 9..273 15..258 318 34.2 Plus
CG17242-PA 245 CG17242-PA 22..237 44..263 309 39.6 Plus
CG17242-PB 245 CG17242-PB 22..237 44..263 309 39.6 Plus
CG32376-PA 291 CG32376-PA 65..290 37..264 307 36.8 Plus
CG11836-PI 281 CG11836-PI 28..271 21..259 306 34.4 Plus
CG11836-PJ 333 CG11836-PJ 80..323 21..259 306 34.4 Plus
CG34458-PA 257 CG34458-PA 10..252 16..259 305 34.3 Plus
Sb-PB 787 CG4316-PB 525..782 16..258 304 34.6 Plus
Sb-PA 787 CG4316-PA 525..782 16..258 304 34.6 Plus
Np-PB 1041 CG34350-PB 794..1035 34..258 294 32.4 Plus
CG18735-PA 364 CG18735-PA 72..311 27..258 290 33.6 Plus
CG32271-PA 248 CG32271-PA 14..242 27..258 289 33.6 Plus
CG32269-PB 332 CG32269-PB 106..332 35..265 287 31.9 Plus
CG32269-PA 332 CG32269-PA 106..332 35..265 287 31.9 Plus
CG4053-PB 265 CG4053-PB 32..256 35..261 286 32.3 Plus
CG3795-PB 305 CG3795-PB 77..278 61..258 286 37.6 Plus
CG3795-PA 305 CG3795-PA 77..278 61..258 286 37.6 Plus
kappaTry-PC 263 CG12388-PC 1..257 10..262 283 32.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:47:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18352-PA 287 GI18352-PA 25..287 2..266 485 41.1 Plus
Dmoj\GI18354-PA 254 GI18354-PA 8..248 9..258 483 43.9 Plus
Dmoj\GI18353-PA 254 GI18353-PA 8..248 9..258 469 42.4 Plus
Dmoj\GI21243-PA 255 GI21243-PA 7..254 14..264 454 40.2 Plus
Dmoj\GI17438-PA 258 GI17438-PA 3..257 13..264 380 36.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:47:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17338-PA 256 GL17338-PA 1..255 15..264 429 38.2 Plus
Dper\GL17339-PA 256 GL17339-PA 1..249 15..258 420 41 Plus
Dper\GL26041-PA 259 GL26041-PA 3..258 13..264 413 40.1 Plus
Dper\GL17142-PA 256 GL17142-PA 1..249 15..258 407 40.2 Plus
Dper\GL17144-PA 252 GL17144-PA 26..245 37..258 403 42.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15051-PA 256 GA15051-PA 1..255 15..264 437 38.5 Plus
Dpse\GA14937-PA 256 GA14937-PA 1..249 15..258 420 41 Plus
Dpse\GA23343-PA 259 GA23343-PA 3..258 13..264 414 40.1 Plus
Dpse\GA24979-PA 256 GA24979-PA 1..249 15..258 410 40.2 Plus
Dpse\GA11574-PA 269 GA11574-PA 8..266 10..273 407 38.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19789-PA 279 GM19789-PA 6..272 15..271 414 39.8 Plus
Dsec\GM18246-PA 248 GM18246-PA 22..243 36..264 404 42.4 Plus
Dsec\GM20441-PA 256 GM20441-PA 7..255 14..264 382 40.6 Plus
Dsec\GM18144-PA 277 GM18144-PA 1..272 9..259 363 36.3 Plus
Dsec\GM21468-PA 260 GM21468-PA 34..253 37..258 362 41.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:47:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17824-PA 398 GD17824-PA 1..262 10..272 1153 81.7 Plus
Dsim\GD25281-PA 279 GD25281-PA 6..272 15..271 410 39.4 Plus
Dsim\GD21711-PA 258 GD21711-PA 3..251 13..258 407 39 Plus
Dsim\GD22852-PA 248 GD22852-PA 22..243 36..264 399 42 Plus
Dsim\GD15391-PA 253 GD15391-PA 7..249 14..258 389 40 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20754-PA 253 GJ20754-PA 23..248 37..263 469 43.3 Plus
Dvir\GJ20753-PA 258 GJ20753-PA 21..256 28..264 432 41 Plus
Dvir\GJ21575-PA 256 GJ21575-PA 29..254 35..264 430 42.3 Plus
Dvir\GJ21498-PA 256 GJ21498-PA 4..249 16..258 413 42.3 Plus
Dvir\GJ21573-PA 271 GJ21573-PA 7..259 15..264 411 40.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21994-PA 256 GK21994-PA 2..255 14..264 431 38.7 Plus
Dwil\GK21995-PA 256 GK21995-PA 6..255 18..264 408 42.4 Plus
Dwil\GK19676-PA 244 GK19676-PA 1..243 19..264 402 42.2 Plus
Dwil\GK19675-PA 256 GK19675-PA 6..255 14..264 398 41.2 Plus
Dwil\GK24137-PA 259 GK24137-PA 9..256 18..264 394 37.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:47:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15141-PA 254 GE15141-PA 1..254 10..266 937 68.3 Plus
Dyak\GE15166-PA 244 GE15166-PA 19..237 33..258 435 46.3 Plus
Dyak\GE15156-PA 244 GE15156-PA 19..237 33..258 432 45.9 Plus
Dyak\epsilonTry-PA 256 GE13534-PA 6..255 14..264 428 38.6 Plus
Dyak\GE13804-PA 269 GE13804-PA 1..262 22..271 412 39.9 Plus

IP19041.hyp Sequence

Translation from 2 to 823

> IP19041.hyp
REQKSNSSIMCLRLLLSILVSIAGLACAARIPGPEERIVGGSYIPIEYVP
WQVSVQNNSLHCCGGVIYSDRAILTAAHCLSNVTVTDLSVRAGSSYWSKG
GQVLKVLKTIAHPKYVPKLYNPYDIAVLILEAPLRLGGTVKKIPLAEQTP
VAGTIVLTSGWGYTRENSSFLWPILQGVHVAILNRTDCLKAYKHVNITID
MICADGQRWDTCQGDSGGPLIETTKGGHRQLIGMVSWGDGCGTNPGVYED
IAFFHNWIKYTVKKNIYKSIVKI*

IP19041.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31681-PA 264 CG31681-PA 1..264 10..273 1411 100 Plus
betaTry-PB 253 CG18211-PB 1..249 15..258 454 42.6 Plus
betaTry-PA 253 CG18211-PA 1..249 15..258 454 42.6 Plus
alphaTry-PA 256 CG18444-PA 7..252 14..261 442 41.9 Plus
gammaTry-PA 253 CG30028-PA 7..249 14..258 435 40.8 Plus