Clone IP19215 Report

Search the DGRC for IP19215

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:192
Well:15
Vector:pOTB7_DraIII
Associated Gene/TranscriptVm26Ac-RA
Protein status:IP19215.pep: gold
Sequenced Size:637

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Fcp26Ac 2008-04-29 Release 5.5 accounting
Fcp26Ac 2008-05-05 Release 5.5 slip selected
Fcp26Ac 2008-08-15 Release 5.9 accounting
Fcp26Ac 2008-12-18 5.12 accounting

Clone Sequence Records

IP19215.complete Sequence

637 bp assembled on 2007-08-02

GenBank Submission: BT030874

> IP19215.complete
GGCTTTCTCAGCTTGCAACGCCACCATATCAAGTCAGCATGTGGAAGTAT
CTCGGATTCTTTGCCCTTTTGGCCGGAGCGAGTTCTCTGGGTCAGCAGGC
TGGTTTGGAAGCCTCGACCTGTGGAGGAAGTACAGGGTGCTTAAGGAGCC
TGCCATCGAGATCATCAGCTGTCGAGCCCTCGGATGCGTATCTGAACCGT
AGGAGGAGGCAACAGCAAATCGTACAGGAGGTAATCGTGGAGAACAACTT
TGGTGGTCCCGGGTTTGGTGGACCTGGTTTTGGAGGACCTGGTTTTGGAG
GTCCTGGCTTCGGAGGTCCGGGCTTCGGAGGCCCTGGCTTTGGACGTCCC
GGCTTTGGAGGTCCCGGTTTCGGAGGTCCCGGCTTCGGAGGTCCTGGTTT
TGGACGTGGCAAATTTGGCTTCGCTCGCAGCTACGACCAGGATGAGGCCC
AGGTACCGGTTCAGGGAACATACCAACAACAAACCACACTCAGTGAAGTT
CCTTCTCCAGCTTGCCCAAAGAACTATGTGTTCTCCTGCGAAGCGGTTAT
CAAGCCGGTTCCATGTGGGTACAGCTCATATTGATGAACTAGCTGATTTT
TAATAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP19215.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
Fcp26Ac-RA 627 Fcp26Ac-RA 3..616 1..614 3055 99.8 Plus
CG3588-RF 2446 CG3588-RF 1295..1356 251..312 205 88.7 Plus
CG3588-RF 2446 CG3588-RF 1295..1356 266..327 205 88.7 Plus
CG3588-RG 2496 CG3588-RG 1435..1496 251..312 205 88.7 Plus
CG3588-RG 2496 CG3588-RG 1435..1496 266..327 205 88.7 Plus
CG3588-RF 2446 CG3588-RF 1295..1354 281..340 195 88.3 Plus
CG3588-RG 2496 CG3588-RG 1435..1494 281..340 195 88.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5957072..5957680 609..1 3045 100 Minus
chr2L 23010047 chr2L 5957274..5957373 347..248 245 83 Minus
chr2L 23010047 chr2L 5957334..5957433 407..308 245 83 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:38:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5958016..5958629 614..1 3055 99.8 Minus
2L 23513712 2L 5958223..5958322 347..248 245 83 Minus
2L 23513712 2L 5958283..5958382 407..308 245 83 Minus
X 23542271 X 2922423..2922484 251..312 205 88.7 Plus
X 23542271 X 2922423..2922484 266..327 205 88.7 Plus
X 23542271 X 2922423..2922482 281..340 195 88.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:34:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5958016..5958629 614..1 3055 99.8 Minus
X 23527363 X 2930521..2930582 251..312 205 88.7 Plus
X 23527363 X 2930521..2930582 266..327 205 88.7 Plus
X 23527363 X 2930521..2930580 281..340 195 88.3 Plus
Blast to na_te.dros performed on 2019-03-16 05:36:08 has no hits.

IP19215.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:37:16 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5957086..5957680 1..595 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:14:22 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:24:22 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:28:21 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:02:56 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:06:19 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:27:59 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:24:22 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 3..611 1..609 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:28:21 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 3..611 1..609 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:02:57 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Fcp26Ac-RA 1..546 39..584 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:06:19 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
Vm26Ac-RA 3..611 1..609 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:16 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5958021..5958629 1..609 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:16 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5958021..5958629 1..609 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:37:16 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5958021..5958629 1..609 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:28:21 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5958021..5958629 1..609 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:56:24 Download gff for IP19215.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5958021..5958629 1..609 100   Minus

IP19215.hyp Sequence

Translation from 2 to 583

> IP19215.hyp
LSQLATPPYQVSMWKYLGFFALLAGASSLGQQAGLEASTCGGSTGCLRSL
PSRSSAVEPSDAYLNRRRRQQQIVQEVIVENNFGGPGFGGPGFGGPGFGG
PGFGGPGFGGPGFGRPGFGGPGFGGPGFGGPGFGRGKFGFARSYDQDEAQ
VPVQGTYQQQTTLSEVPSPACPKNYVFSCEAVIKPVPCGYSSY*

IP19215.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
Vm26Ac-PA 181 CG13997-PA 1..181 13..193 997 100 Plus
CG7296-PB 161 CG7296-PB 46..118 84..142 204 71.2 Plus
CG7296-PA 161 CG7296-PA 46..118 84..142 204 71.2 Plus
CG3588-PF 631 CG3588-PF 223..333 24..128 192 43.6 Plus
CG3588-PH 659 CG3588-PH 251..361 24..128 192 43.6 Plus
CG7296-PB 161 CG7296-PB 33..101 81..136 175 70 Plus
CG7296-PA 161 CG7296-PA 33..101 81..136 175 70 Plus
CG7296-PB 161 CG7296-PB 36..84 89..137 146 72.2 Plus
CG7296-PA 161 CG7296-PA 36..84 89..137 146 72.2 Plus

IP19215.pep Sequence

Translation from 38 to 583

> IP19215.pep
MWKYLGFFALLAGASSLGQQAGLEASTCGGSTGCLRSLPSRSSAVEPSDA
YLNRRRRQQQIVQEVIVENNFGGPGFGGPGFGGPGFGGPGFGGPGFGGPG
FGRPGFGGPGFGGPGFGGPGFGRGKFGFARSYDQDEAQVPVQGTYQQQTT
LSEVPSPACPKNYVFSCEAVIKPVPCGYSSY*

IP19215.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24270-PA 171 GG24270-PA 1..171 1..181 346 81.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:36
Subject Length Description Subject Range Query Range Score Percent Strand
Vm26Ac-PA 181 CG13997-PA 1..181 1..181 997 100 Plus
CG7296-PB 161 CG7296-PB 46..118 72..130 204 71.2 Plus
CG7296-PA 161 CG7296-PA 46..118 72..130 204 71.2 Plus
CG3588-PF 631 CG3588-PF 223..333 12..116 192 43.6 Plus
CG3588-PH 659 CG3588-PH 251..361 12..116 192 43.6 Plus
CG3588-PG 659 CG3588-PG 251..361 12..116 192 43.6 Plus
CG3588-PE 891 CG3588-PE 251..361 12..116 192 43.6 Plus
CG3588-PI 662 CG3588-PI 251..364 12..116 187 43.3 Plus
CG7296-PB 161 CG7296-PB 33..101 69..124 175 70 Plus
CG7296-PA 161 CG7296-PA 33..101 69..124 175 70 Plus
CG9757-PB 127 CG9757-PB 53..122 71..124 164 62.9 Plus
CG9757-PA 127 CG9757-PA 53..122 71..124 164 62.9 Plus
CG9757-PB 127 CG9757-PB 49..115 71..124 161 63.2 Plus
CG9757-PA 127 CG9757-PA 49..115 71..124 161 63.2 Plus
CG7299-PC 177 CG7299-PC 51..125 68..127 161 63.6 Plus
CG7299-PA 177 CG7299-PA 51..125 68..127 161 63.6 Plus
CG9757-PB 127 CG9757-PB 60..126 71..122 158 65.7 Plus
CG9757-PA 127 CG9757-PA 60..126 71..122 158 65.7 Plus
CG10918-PA 183 CG10918-PA 45..102 72..120 156 67.2 Plus
CG10918-PA 183 CG10918-PA 53..106 72..119 154 70.4 Plus
CG15140-PB 335 CG15140-PB 170..229 68..127 154 50 Plus
CG7299-PC 177 CG7299-PC 39..91 72..128 153 61 Plus
CG7299-PA 177 CG7299-PA 39..91 72..128 153 61 Plus
CG10918-PA 183 CG10918-PA 40..99 75..127 153 68.3 Plus
CG15140-PB 335 CG15140-PB 176..234 69..127 152 50.8 Plus
CG15140-PB 335 CG15140-PB 191..256 69..135 151 47.8 Plus
CG15140-PB 335 CG15140-PB 184..239 72..127 150 53.6 Plus
CG7296-PB 161 CG7296-PB 36..84 77..125 146 72.2 Plus
CG7296-PA 161 CG7296-PA 36..84 77..125 146 72.2 Plus
CG17108-PA 342 CG17108-PA 114..168 72..124 146 58.2 Plus
CG15140-PB 335 CG15140-PB 166..224 69..127 144 49.2 Plus
CG15140-PB 335 CG15140-PB 186..250 69..133 144 46.2 Plus
CG17032-PB 312 CG17032-PB 99..178 72..141 144 54.9 Plus
CG17032-PA 312 CG17032-PA 99..178 72..141 144 54.9 Plus
CG9757-PB 127 CG9757-PB 74..127 71..118 141 64.9 Plus
CG9757-PA 127 CG9757-PA 74..127 71..118 141 64.9 Plus
CG17738-PA 110 CG17738-PA 54..110 71..122 140 60 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19100-PA 209 GL19100-PA 1..205 1..180 172 42 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25347-PA 187 GA25347-PA 130..183 129..180 148 61.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17984-PA 169 GM17984-PA 1..169 1..181 482 81.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:11:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22621-PA 171 GD22621-PA 1..171 1..181 504 91.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15411-PA 175 GK15411-PA 1..168 1..177 154 49.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18967-PA 186 GE18967-PA 1..186 1..181 379 80.6 Plus