Clone IP19242 Report

Search the DGRC for IP19242

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:192
Well:42
Vector:pOTB7_DraIII
Associated Gene/TranscriptCG31928-RA
Protein status:IP19242.pep: gold
Sequenced Size:1376

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31928 2008-04-29 Release 5.5 accounting
CG31928 2008-05-05 Release 5.5 slip selected
CG31928 2008-08-15 Release 5.9 accounting
CG31928 2008-12-18 5.12 accounting

Clone Sequence Records

IP19242.complete Sequence

1376 bp assembled on 2007-11-15

GenBank Submission: BT031215

> IP19242.complete
AAAGTGAGGCCCACGAACGATGCAGTCTTCGCCGAAACTCGCACTGGCAC
TGACCTTAGTGCTGATTTGGTGCCTGGCCCAAAGTCATGTGGAATCCAGA
AGATGGCGAAAGTCCGTGCAACTGAAACTGCACAGGGAAACGAACCACAC
CAAAATACTGAGCAGTTTCCACAACCAGAAGCTTAGACTCAAGGAAAAAC
TGAGCCCGACCAGCGATTTGGCGATATCCTCGGTATCTGTATATCAAACA
ACCGTGTCAAAAGAGAACCTGATCAATTCCCACAACACCGAGTACTATGT
TACGGCCGGTTTCGGGACGCCCAAGTCGCAGCCAGTCACTCTTCTGGTGG
ACACCGCCTCGGCGAATCTGCTGGTCTACTCCTCGGAGTTTGTGAAACAG
TCCTGTTTGCACCACGATGGCTACAATTCCAGTGAGTCGCAAACGTATCA
GGCCAATGGATCGCCCTTTCAGATACAGTTCGCATCGCAGGAAATTCTGA
CAGGAATCCTCTCCACGGACACTTTCACCTTAGGAGATCTGGTCATTAAG
AATCAGACCTTTGCCGAAATAAACTCGGCGCCTACGGATATGTGTAAACG
ATCGAATTTCGATGGCATCATTGGTCTGGGATTCTCCGAAATCGCCCTGA
ATGGAGTGGAGACCCCTCTGGACAATATTTTGGAACAGGGACTCATCGAC
GAACCCATCTTCTCCCTGTACGTCAACCGGAACGCCTCGGATGCCAGTAA
TGGTGGCGTATTGCTGCTCGGAGGATCAGATCCCACTCTTTACAGCGGAT
GCCTGACATACGTGCCAGTTTCCAAAGTGGGTTTTTGGCAGATCACCGTG
GGCCAAGTTGAGATTGGGTCCAAGAAGCTGTGCTCCAACTGCCAGGCCAT
CTTCGATATGGGAACCTCCTTGATAATTGTGCCGTGCCCTGCTCTGAAAA
TCATAAACAAGAAACTGGGCATTAAGGAAACCGATAGAAAGGACGGTGTC
TATATCATTGACTGCAAGAAGGTGTCTCATTTGCCCAAGATCGTCTTTAA
TATTGGATGGAAGGACTTCACCCTCAACCCGTCCGACTATATTCTCAACT
ACAGTGGAACCTGCGTATCAGGGTTTTCTAGTCTCTCCGACTGCAATGGA
ACGCAAACCAATGATGATAGTGAAGACTTGAACAACATCTGGGTGTTCGG
CGATGTGTTTTTCGGAGCAATCTTCACATTGTTCGATTTTGGTCTCAAAT
TAGTTGGCATGGCCCCCAAAGTTTAAGCAAATATGAATCCGCAATGTATA
ATTCGACCAATTTTTTGTAATTATATCATTAAGATTTTGTTCTTCCCTTC
TAGTAGAAAAAAAAAAAAAAAAAAAA

IP19242.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG31928-RA 1357 CG31928-RA 2..1357 1..1356 6780 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:12:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 1492214..1493569 1..1356 6615 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:38:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:12:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1492295..1493651 1..1357 6785 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:30:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1492295..1493651 1..1357 6785 100 Plus
Blast to na_te.dros performed on 2019-03-15 23:12:50 has no hits.

IP19242.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:13:41 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 1492214..1493569 1..1356 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:14:25 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:02:59 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:32:03 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:48:22 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:30 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:51:27 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:02:59 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1351 1..1351 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:32:03 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RB 1..1356 1..1356 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:48:22 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RA 1..1257 20..1276 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:30 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
CG31928-RB 1..1356 1..1356 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:41 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1492295..1493650 1..1356 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:41 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1492295..1493650 1..1356 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:41 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1492295..1493650 1..1356 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:32:03 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1492295..1493650 1..1356 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:54:58 Download gff for IP19242.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1492295..1493650 1..1356 100   Plus

IP19242.hyp Sequence

Translation from 19 to 1275

> IP19242.hyp
MQSSPKLALALTLVLIWCLAQSHVESRRWRKSVQLKLHRETNHTKILSSF
HNQKLRLKEKLSPTSDLAISSVSVYQTTVSKENLINSHNTEYYVTAGFGT
PKSQPVTLLVDTASANLLVYSSEFVKQSCLHHDGYNSSESQTYQANGSPF
QIQFASQEILTGILSTDTFTLGDLVIKNQTFAEINSAPTDMCKRSNFDGI
IGLGFSEIALNGVETPLDNILEQGLIDEPIFSLYVNRNASDASNGGVLLL
GGSDPTLYSGCLTYVPVSKVGFWQITVGQVEIGSKKLCSNCQAIFDMGTS
LIIVPCPALKIINKKLGIKETDRKDGVYIIDCKKVSHLPKIVFNIGWKDF
TLNPSDYILNYSGTCVSGFSSLSDCNGTQTNDDSEDLNNIWVFGDVFFGA
IFTLFDFGLKLVGMAPKV*

IP19242.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG31928-PB 418 CG31928-PB 1..418 1..418 2169 100 Plus
CG31928-PA 418 CG31928-PA 1..418 1..418 2169 100 Plus
CG31926-PB 410 CG31926-PB 28..409 30..418 765 41.5 Plus
CG31926-PA 410 CG31926-PA 28..409 30..418 765 41.5 Plus
Bace-PB 372 CG13095-PB 55..370 78..416 657 41.9 Plus

IP19242.pep Sequence

Translation from 19 to 1275

> IP19242.pep
MQSSPKLALALTLVLIWCLAQSHVESRRWRKSVQLKLHRETNHTKILSSF
HNQKLRLKEKLSPTSDLAISSVSVYQTTVSKENLINSHNTEYYVTAGFGT
PKSQPVTLLVDTASANLLVYSSEFVKQSCLHHDGYNSSESQTYQANGSPF
QIQFASQEILTGILSTDTFTLGDLVIKNQTFAEINSAPTDMCKRSNFDGI
IGLGFSEIALNGVETPLDNILEQGLIDEPIFSLYVNRNASDASNGGVLLL
GGSDPTLYSGCLTYVPVSKVGFWQITVGQVEIGSKKLCSNCQAIFDMGTS
LIIVPCPALKIINKKLGIKETDRKDGVYIIDCKKVSHLPKIVFNIGWKDF
TLNPSDYILNYSGTCVSGFSSLSDCNGTQTNDDSEDLNNIWVFGDVFFGA
IFTLFDFGLKLVGMAPKV*

IP19242.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15183-PA 423 GF15183-PA 1..414 1..418 1050 53.6 Plus
Dana\GF15194-PA 411 GF15194-PA 8..410 6..418 755 39.2 Plus
Dana\GF14369-PA 371 GF14369-PA 4..369 8..416 655 38.4 Plus
Dana\GF19727-PA 449 GF19727-PA 5..378 11..415 619 38.6 Plus
Dana\GF19728-PA 390 GF19728-PA 23..387 34..416 596 37.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24792-PA 419 GG24792-PA 1..419 1..418 1770 78 Plus
Dere\GG24794-PA 412 GG24794-PA 11..411 7..418 801 42.8 Plus
Dere\GG23678-PA 392 GG23678-PA 22..387 34..415 694 41.8 Plus
Dere\GG24067-PA 372 GG24067-PA 18..370 36..416 656 39.9 Plus
Dere\GG23677-PA 427 GG23677-PA 22..385 34..415 627 37.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:22:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11415-PA 416 GH11415-PA 10..416 15..418 883 44.8 Plus
Dgri\GH24623-PA 374 GH24623-PA 57..372 79..416 648 41.1 Plus
Dgri\GH11416-PA 400 GH11416-PA 24..400 24..418 614 37.9 Plus
Dgri\GH24344-PA 373 GH24344-PA 17..371 36..416 610 36.8 Plus
Dgri\GH21578-PA 388 GH21578-PA 56..385 79..415 551 38.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31928-PB 418 CG31928-PB 1..418 1..418 2169 100 Plus
CG31928-PA 418 CG31928-PA 1..418 1..418 2169 100 Plus
CG31926-PB 410 CG31926-PB 28..409 30..418 765 41.5 Plus
CG31926-PA 410 CG31926-PA 28..409 30..418 765 41.5 Plus
Bace-PB 372 CG13095-PB 55..370 78..416 657 41.9 Plus
Bace-PA 372 CG13095-PA 55..370 78..416 657 41.9 Plus
CG17134-PA 391 CG17134-PA 5..386 13..415 652 40.8 Plus
CG6508-PA 423 CG6508-PA 58..385 76..415 623 40.9 Plus
CG33128-PA 405 CG33128-PA 5..402 13..415 578 36.8 Plus
CG5863-PA 395 CG5863-PA 71..393 82..416 570 39.2 Plus
cathD-PC 392 CG1548-PC 63..389 82..415 568 39.9 Plus
cathD-PB 392 CG1548-PB 63..389 82..415 568 39.9 Plus
cathD-PA 392 CG1548-PA 63..389 82..415 568 39.9 Plus
Pgcl-PA 407 CG13374-PA 67..378 82..416 508 34.3 Plus
CG10104-PA 404 CG10104-PA 68..400 75..415 471 33 Plus
CG31661-PA 393 CG31661-PA 6..393 13..418 449 30 Plus
CG17283-PA 465 CG17283-PA 83..459 26..415 420 30.3 Plus
CG5860-PA 370 CG5860-PA 49..367 78..415 371 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:22:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14564-PA 434 GI14564-PA 29..434 21..418 924 44.8 Plus
Dmoj\GI11124-PA 373 GI11124-PA 18..371 36..416 670 39.7 Plus
Dmoj\GI11125-PA 371 GI11125-PA 57..369 81..416 640 41.4 Plus
Dmoj\GI14567-PA 402 GI14567-PA 19..400 20..416 633 38.9 Plus
Dmoj\GI19550-PA 387 GI19550-PA 51..384 75..415 552 39.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15683-PA 413 GL15683-PA 1..413 1..418 1031 50.2 Plus
Dper\GL15705-PA 408 GL15705-PA 10..404 13..415 794 41.9 Plus
Dper\GL26637-PA 387 GL26637-PA 15..382 27..415 684 41 Plus
Dper\GL25647-PA 373 GL25647-PA 5..371 8..416 650 37.5 Plus
Dper\GL11239-PA 388 GL11239-PA 59..385 82..415 592 40.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16571-PA 415 GA16571-PA 1..415 1..418 1029 50 Plus
Dpse\GA16570-PA 408 GA16570-PA 10..404 13..415 792 40.8 Plus
Dpse\GA14340-PA 387 GA14340-PA 15..382 27..415 679 40.8 Plus
Dpse\GA22213-PA 373 GA22213-PA 5..371 8..416 653 38 Plus
Dpse\GA25369-PA 373 GA25369-PA 5..371 8..416 650 37.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16818-PA 419 GM16818-PA 1..419 1..418 2053 91.9 Plus
Dsec\GM16821-PA 410 GM16821-PA 10..409 13..418 747 40.8 Plus
Dsec\GM18746-PA 392 GM18746-PA 23..387 33..415 675 42.2 Plus
Dsec\GM12869-PA 372 GM12869-PA 18..370 36..416 652 39.4 Plus
Dsec\GM15229-PA 395 GM15229-PA 40..395 56..418 592 37.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23098-PA 419 GD23098-PA 1..419 1..418 2026 91.2 Plus
Dsim\GD23100-PA 399 GD23100-PA 10..398 13..418 717 40.8 Plus
Dsim\GD23735-PA 404 GD23735-PA 39..366 76..415 621 40.6 Plus
Dsim\GD23736-PA 564 GD23736-PA 263..559 108..415 615 44.3 Plus
Dsim\GD19155-PA 395 GD19155-PA 40..395 56..418 587 37.3 Plus
Dsim\GD23736-PA 564 GD23736-PA 22..281 34..308 461 40.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17069-PA 423 GJ17069-PA 25..423 24..418 964 50.2 Plus
Dvir\GJ15983-PA 372 GJ15983-PA 7..370 14..416 664 38.3 Plus
Dvir\GJ15982-PA 374 GJ15982-PA 57..372 80..416 644 41.6 Plus
Dvir\GJ17077-PA 404 GJ17077-PA 27..402 21..416 623 39.5 Plus
Dvir\GJ21122-PA 391 GJ21122-PA 1..388 1..415 551 35.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15195-PA 431 GK15195-PA 20..429 22..418 1000 50.4 Plus
Dwil\GK15196-PA 415 GK15196-PA 4..414 3..418 862 44.4 Plus
Dwil\GK24836-PA 372 GK24836-PA 21..370 34..416 675 39.3 Plus
Dwil\GK25659-PA 406 GK25659-PA 72..390 82..416 616 42 Plus
Dwil\GK11645-PA 388 GK11645-PA 58..388 76..418 609 38.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17582-PA 421 GE17582-PA 1..421 1..418 1918 84.6 Plus
Dyak\GE17604-PA 410 GE17604-PA 28..409 30..418 816 42.7 Plus
Dyak\GE18491-PA 392 GE18491-PA 22..387 34..415 668 41.2 Plus
Dyak\GE10927-PA 372 GE10927-PA 21..370 34..416 659 39.4 Plus
Dyak\GE18490-PA 403 GE18490-PA 9..365 37..415 598 36.4 Plus