Clone IP19912 Report

Search the DGRC for IP19912

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:199
Well:12
Vector:pOT2
Associated Gene/TranscriptCG34049-RB
Protein status:IP19912.pep: gold
Sequenced Size:989

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34049 2008-04-29 Release 5.5 accounting
CG34049 2008-05-05 Release 5.5 slip selected
CG34049 2008-08-15 Release 5.9 accounting
CG34049 2008-12-18 5.12 accounting

Clone Sequence Records

IP19912.complete Sequence

989 bp assembled on 2008-05-14

GenBank Submission: BT031063

> IP19912.complete
ATTAAATTAAATGGAGATTGAAAATAAAGTCCAGTCGGCAGAGAAATGTC
CTTTGCAGATAATTCAGCACAATGACGCTACGTTTATTGGTTGCGATTCA
AGCAACCGCGATTTGGAAAAGTGCCGCAGCTGCCTCACTTCCTTCTGCCG
TAAACCCATTAAGATTTACCATAATTCCCGGAACTATCTGGCCTGCGAGG
TCCAGAGATCACAATCTATAAATTCCATAAAGTCACTGCCAGTCAAATTT
CCATCAACACCAAATAGATCACTTAACACAGAAAAGGATTGGTCGCATGG
TAAAAGGTGTTTACAATGCGCAGCTCCCAAGTGCAAAACATCTTCCAGAA
GTTCCATTCAGTCGAAAAAACTGAAAAAAGATAAGAAGTCTCTGTTAAAG
GAATTTGAAATATACAAAATTCCTATCATTCGACGCAAGCCTATAAAACA
AGCTGTACTAAGGGAAACCAATAAGTACCGAAGGCTTCACAACGCCAATC
CCCTGAAAATGGATGAAAAACTTTGTTCCTATGCACAGGAGTGGGCAGAT
CATTTGGCTGATCTGAACAAACTGGAAACTCGACCTAATCCTCTTTACGG
CGAGAATATTATGCGTGTCCGGAGATCCAAATTCTCCGTGGATCAAATAC
TGAAACTCTGGTACCAAGAAAAATACAACTACGATTACTTAAAGCCAGGC
TTTAATTTGTACACTGGACATTTTACCCAGTTGGTTTGGAGAGAGTCAGA
GTTCCTGGGAGTGGGCGTGGCATGCGATGTTTCCTCCATTTGGATTGTGT
GCAATTACCATCCGCCTGGAAATGTAAGCGAACATTTCAGGGAAAATGTC
CTGCCTAGAAAATTCCTTCTACTTAAATCGGACTTGGATGCCAAGGAAAC
TAGAAAATCGAAACATCACAATTTAAAATAGAAAATGGTAAATAAAACAA
ACAAATACTGGACCTAGAAAAAAAAAAAAAAAAAAAAAA

IP19912.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG34049-RB 1033 CG34049-RB 67..1033 1..967 4835 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:37:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2264505..2265051 550..4 2675 99.3 Minus
chr2L 23010047 chr2L 2264216..2264442 777..551 1090 98.7 Minus
chr2L 23010047 chr2L 2263964..2264153 967..778 920 98.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:40:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2264772..2265321 550..1 2750 100 Minus
2L 23513712 2L 2264483..2264709 777..551 1135 100 Minus
2L 23513712 2L 2264230..2264420 968..778 955 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2264772..2265321 550..1 2750 100 Minus
2L 23513712 2L 2264483..2264709 777..551 1135 100 Minus
2L 23513712 2L 2264230..2264420 968..778 955 100 Minus
Blast to na_te.dros performed 2019-03-16 09:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
TAHRE 10463 TAHRE OSV 10463bp 7340..7408 366..437 119 65.3 Plus

IP19912.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:38:12 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2263964..2264153 778..967 98 <- Minus
chr2L 2264216..2264442 551..777 98 <- Minus
chr2L 2264505..2265054 1..550 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:16:51 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RA 1..769 11..780 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:49:55 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..921 11..931 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:03:24 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..921 11..931 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:49:13 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RA 1..769 11..780 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:16 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..921 11..931 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:12:49 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RA 1..769 11..780 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:49:55 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..967 1..967 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:03:24 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..967 1..967 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:49:14 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RA 1..769 11..780 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:16 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
CG34049-RB 1..967 1..967 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:12 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2264231..2264420 778..967 100 <- Minus
2L 2264483..2264709 551..777 100 <- Minus
2L 2264772..2265321 1..550 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:12 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2264231..2264420 778..967 100 <- Minus
2L 2264483..2264709 551..777 100 <- Minus
2L 2264772..2265321 1..550 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:12 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2264231..2264420 778..967 100 <- Minus
2L 2264483..2264709 551..777 100 <- Minus
2L 2264772..2265321 1..550 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:03:24 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2264483..2264709 551..777 100 <- Minus
arm_2L 2264231..2264420 778..967 100 <- Minus
arm_2L 2264772..2265321 1..550 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:28:42 Download gff for IP19912.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2264231..2264420 778..967 100 <- Minus
2L 2264483..2264709 551..777 100 <- Minus
2L 2264772..2265321 1..550 100   Minus

IP19912.pep Sequence

Translation from 10 to 930

> IP19912.pep
MEIENKVQSAEKCPLQIIQHNDATFIGCDSSNRDLEKCRSCLTSFCRKPI
KIYHNSRNYLACEVQRSQSINSIKSLPVKFPSTPNRSLNTEKDWSHGKRC
LQCAAPKCKTSSRSSIQSKKLKKDKKSLLKEFEIYKIPIIRRKPIKQAVL
RETNKYRRLHNANPLKMDEKLCSYAQEWADHLADLNKLETRPNPLYGENI
MRVRRSKFSVDQILKLWYQEKYNYDYLKPGFNLYTGHFTQLVWRESEFLG
VGVACDVSSIWIVCNYHPPGNVSEHFRENVLPRKFLLLKSDLDAKETRKS
KHHNLK*

IP19912.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15289-PA 165 GF15289-PA 3..153 106..256 408 52.6 Plus
Dana\GF14614-PA 169 GF14614-PA 34..169 149..284 334 44.9 Plus
Dana\GF14618-PA 127 GF14618-PA 1..125 159..283 239 42.4 Plus
Dana\GF18369-PA 173 GF18369-PA 26..157 150..283 188 36 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24536-PA 294 GG24536-PA 1..258 1..256 1038 76.9 Plus
Dere\GG24843-PA 170 GG24843-PA 35..170 149..284 332 44.9 Plus
Dere\GG13534-PA 197 GG13534-PA 14..173 137..298 257 36.7 Plus
Dere\GG24847-PA 141 GG24847-PA 1..136 145..280 246 42.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13088-PA 169 GH13088-PA 34..169 149..285 333 46 Plus
Dgri\GH13090-PA 167 GH13090-PA 22..167 139..284 326 42.5 Plus
Dgri\GH15654-PA 128 GH15654-PA 2..123 156..280 204 37.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34049-PB 306 CG34049-PB 1..306 1..306 1642 100 Plus
CG4270-PA 170 CG4270-PA 35..170 149..284 316 44.1 Plus
CG16995-PA 146 CG16995-PA 7..143 146..282 314 45.3 Plus
CG31482-PA 195 CG31482-PA 27..159 150..282 246 39.7 Plus
CG4270-PB 142 CG4270-PB 35..140 149..254 231 43.4 Plus
CG31286-PB 205 CG31286-PB 32..165 149..284 147 34.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14152-PA 169 GI14152-PA 34..169 149..285 339 46 Plus
Dmoj\GI14160-PA 145 GI14160-PA 10..143 149..282 332 44.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:08:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18717-PA 171 GL18717-PA 34..169 149..285 324 46.7 Plus
Dper\GL18718-PA 152 GL18718-PA 12..150 145..283 285 46.8 Plus
Dper\GL21759-PA 134 GL21759-PA 1..130 159..287 272 42.9 Plus
Dper\GL23728-PA 166 GL23728-PA 23..161 147..288 189 31.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18072-PA 171 GA18072-PA 34..169 149..285 325 46.7 Plus
Dpse\GA14264-PA 169 GA14264-PA 29..167 145..283 287 46.8 Plus
Dpse\GA16278-PA 134 GA16278-PA 1..130 159..287 274 42.9 Plus
Dpse\GA25572-PA 201 GA25572-PA 3..153 126..280 189 33.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:08:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18243-PA 268 GM18243-PA 1..260 1..256 1226 88.5 Plus
Dsec\GM18327-PA 170 GM18327-PA 35..170 149..284 323 44.1 Plus
Dsec\GM18331-PA 146 GM18331-PA 6..143 145..282 271 44.9 Plus
Dsec\GM10902-PA 247 GM10902-PA 79..211 150..282 227 40.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22849-PA 268 GD22849-PA 1..260 1..256 1216 88.1 Plus
Dsim\GD23143-PA 170 GD23143-PA 35..170 149..284 324 44.1 Plus
Dsim\GD23146-PA 146 GD23146-PA 6..143 145..282 271 44.9 Plus
Dsim\GD19881-PA 184 GD19881-PA 16..148 150..282 228 40.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17497-PA 146 GJ17497-PA 4..143 143..282 324 43.6 Plus
Dvir\GJ17495-PA 126 GJ17495-PA 1..126 159..285 303 45.7 Plus
Dvir\GJ10085-PA 194 GJ10085-PA 61..191 149..283 209 36 Plus
Dvir\GJ10086-PA 82 GJ10086-PA 1..73 216..287 181 45.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15149-PA 175 GK15149-PA 1..140 167..306 483 58.6 Plus
Dwil\GK14990-PA 171 GK14990-PA 34..169 149..285 325 44.5 Plus
Dwil\GK15150-PA 141 GK15150-PA 5..140 149..284 274 44.1 Plus
Dwil\GK11578-PA 150 GK11578-PA 12..145 149..280 181 35 Plus
Dwil\GK11171-PA 172 GK11171-PA 32..170 145..285 179 34.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:08:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15151-PA 295 GE15151-PA 1..294 3..303 1246 79.7 Plus
Dyak\GE18084-PA 170 GE18084-PA 35..170 149..284 332 45.6 Plus
Dyak\GE10229-PA 193 GE10229-PA 16..158 139..282 258 39.5 Plus
Dyak\GE18117-PA 145 GE18117-PA 4..141 143..280 249 42.8 Plus
Dyak\GE10228-PA 193 GE10228-PA 16..168 139..296 238 36.9 Plus

IP19912.hyp Sequence

Translation from 10 to 930

> IP19912.hyp
MEIENKVQSAEKCPLQIIQHNDATFIGCDSSNRDLEKCRSCLTSFCRKPI
KIYHNSRNYLACEVQRSQSINSIKSLPVKFPSTPNRSLNTEKDWSHGKRC
LQCAAPKCKTSSRSSIQSKKLKKDKKSLLKEFEIYKIPIIRRKPIKQAVL
RETNKYRRLHNANPLKMDEKLCSYAQEWADHLADLNKLETRPNPLYGENI
MRVRRSKFSVDQILKLWYQEKYNYDYLKPGFNLYTGHFTQLVWRESEFLG
VGVACDVSSIWIVCNYHPPGNVSEHFRENVLPRKFLLLKSDLDAKETRKS
KHHNLK*

IP19912.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG34049-PB 306 CG34049-PB 1..306 1..306 1642 100 Plus
CG4270-PA 170 CG4270-PA 35..170 149..284 316 44.1 Plus
CG16995-PA 146 CG16995-PA 7..143 146..282 314 45.3 Plus
CG31482-PA 195 CG31482-PA 27..159 150..282 246 39.7 Plus
CG4270-PB 142 CG4270-PB 35..140 149..254 231 43.4 Plus