Clone IP20205 Report

Search the DGRC for IP20205

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:202
Well:5
Vector:pOT2
Associated Gene/TranscriptCG13028-RA
Protein status:IP20205.pep: gold
Sequenced Size:761

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13028 2008-05-05 Release 5.5 slip selected
CG13028 2008-08-15 Release 5.9 accounting
CG13028 2008-12-18 5.12 accounting

Clone Sequence Records

IP20205.complete Sequence

761 bp assembled on 2008-05-14

GenBank Submission: BT032709

> IP20205.complete
TTGGCCAAGGCGAAGCCAAAATTAGTGCACCCACAGTCCAGTGCCAGAGC
GGATCTTCTCTTGACTTCGATCATCCGAAATGCAGTTCATCTATTTGACG
CTGGCATTGGGGCTGATCTTCACCACTGCCCTTCAGGCGGCCATTATACC
ACTGACCCTGATCAAAAACGGAATTGAAGCGAATTCCCAAGCACTTCCCA
CGGATACGGAGAAGTTCGGTTACCTGGAATTCAAACCCAATGGATCACTA
ATACTCAGAAGGGCGCCCAATCAGAGTGGCAGTAACCTACAGGACCTGGT
AATGCTGAGAGGAGTTCTTCAGGCTCTGAAAGCGAGTCCCTCGAAAATGT
CGGACATCGGTGGCGAAACGCGATTGAGCCTAAGGATTTATGGAGATGGA
GTGGAACACAAGTTTCCGCCCATACTGGAGAATATCATTCAACGCATTCA
AACGTATTTTTCGGTTTATCGCTTTACGGATACAAGCAAACCCGGTGGAT
TGCAGCGAATTGAACTTACTACACAGCCGCCGGATGATTCTCCGGATGTA
ACCACTGCAAAAGCCGAGAACGATGATGAACTGATAGCAGTCGGTGAGCA
GGACGCGTACATTACAGTGGGGGATGATACAGACTAGAATTCACGCTATT
TAATACATATTTATTCAACTAGCTATGTAAGACGATAAAAGTGCTGTAAT
TTAAATATTTTTTAAAAATATATCACCCTCATTCGCAAATATCAAAAAAA
AAAAAAAAAAA

IP20205.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-RA 743 CG13028-RA 1..743 1..743 3715 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16912691..16913433 1..743 3610 99.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:41:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:18:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16923252..16923995 1..744 3720 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16916352..16917095 1..744 3720 100 Plus
Blast to na_te.dros performed on 2019-03-16 01:18:14 has no hits.

IP20205.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:18:53 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16912691..16913433 1..743 95   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:19:37 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:50:25 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:04:57 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:49:43 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:31:00 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:13:16 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:50:25 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..743 1..743 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:04:57 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..743 1..743 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:49:43 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..558 80..637 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:31:00 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
CG13028-RA 1..743 1..743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:18:53 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16923252..16923994 1..743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:18:53 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16923252..16923994 1..743 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:18:53 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16923252..16923994 1..743 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:04:57 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16916352..16917094 1..743 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:28:59 Download gff for IP20205.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16916352..16917094 1..743 100   Plus

IP20205.pep Sequence

Translation from 79 to 636

> IP20205.pep
MQFIYLTLALGLIFTTALQAAIIPLTLIKNGIEANSQALPTDTEKFGYLE
FKPNGSLILRRAPNQSGSNLQDLVMLRGVLQALKASPSKMSDIGGETRLS
LRIYGDGVEHKFPPILENIIQRIQTYFSVYRFTDTSKPGGLQRIELTTQP
PDDSPDVTTAKAENDDELIAVGEQDAYITVGDDTD*

IP20205.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23944-PA 193 GF23944-PA 1..192 1..184 549 59.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13592-PA 184 GG13592-PA 1..184 1..185 832 85.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16322-PA 165 GH16322-PA 28..164 38..182 421 58.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-PA 185 CG13028-PA 1..185 1..185 935 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13267-PA 191 GI13267-PA 23..143 19..151 328 49.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20861-PA 181 GL20861-PA 2..181 1..185 514 58.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28581-PA 181 GA28581-PA 2..181 1..185 528 59.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25675-PA 184 GM25675-PA 1..184 1..185 837 87.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14679-PA 184 GD14679-PA 1..184 1..185 879 91.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12037-PA 158 GJ12037-PA 37..135 44..149 308 63.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19273-PA 191 GK19273-PA 1..188 1..182 407 50 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19889-PA 184 GE19889-PA 1..184 1..185 840 87.6 Plus

IP20205.hyp Sequence

Translation from 79 to 636

> IP20205.hyp
MQFIYLTLALGLIFTTALQAAIIPLTLIKNGIEANSQALPTDTEKFGYLE
FKPNGSLILRRAPNQSGSNLQDLVMLRGVLQALKASPSKMSDIGGETRLS
LRIYGDGVEHKFPPILENIIQRIQTYFSVYRFTDTSKPGGLQRIELTTQP
PDDSPDVTTAKAENDDELIAVGEQDAYITVGDDTD*

IP20205.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG13028-PA 185 CG13028-PA 1..185 1..185 935 100 Plus