IP20256.complete Sequence
639 bp assembled on 2010-02-19
GenBank Submission: BT120357.1
> IP20256.complete
CAAACACTAAGTATACACTCGTTTGTGATGCGTCGCACTTGGGTCCTGTT
TTACTTATTCCTAATTGGGTTGGCATTGGTAAAGACCACACCGAAAGAAC
TTCACTCAGAATCGATTTTTGAAGATGACGTCGCTCTAAGGTCCAAGTCA
AGTAAAGCTGATGCTCTGCTTACAAAAACTACAACAAAAGCGTCAGCATC
AAATTTATTCTTTAAAGTCATTACAACAACCCGACCACCTGTGACAATCA
GGCGCGTTGTAGCCAAGTCAAAGGGTAAGGATCCAGAAAGAACTGACCTC
CACCGCAAGCACCTCACACATCACAAACATCACTCAAAAAACAAAAAAAA
GAATCCACATAATCGTGCCGAAGCGAATCGAAACAAGGATCATAGTCCCC
ATGATCCCCACAAAAACCTGAAAAGAAAGGCAGAGGCACTCCCTAAGTCA
AATCAGAATATAAATGGCACTACTTCTCTGGAAGCCAAGAGTACGTCTTT
AAAAGATGTACATAAGTGAACGTCAATTTCTTTGCGTCAATACCTACTAC
GTATCCCTGACCATATAAATGTAATGATGTAATGTATTGCCAACAAATAA
TAAATTAAACTAACTAAAAACAAAAAAAAAAAAAAAAAA
IP20256.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:35:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-RB | 621 | CG32457-RB | 1..621 | 1..621 | 3105 | 100 | Plus |
CG32457-RC | 686 | CG32457-RC | 152..557 | 218..623 | 2030 | 100 | Plus |
CG32457-RC | 686 | CG32457-RC | 1..151 | 1..151 | 755 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:42:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 22976562..22977182 | 1..621 | 3105 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:42:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22987642..22988264 | 1..623 | 3115 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:52:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 22980742..22981364 | 1..623 | 3115 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 17:42:37 has no hits.
IP20256.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:43:15 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 22976562..22977182 | 1..621 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:54:25 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..492 | 28..519 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:37:10 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..492 | 28..519 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:05:21 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..492 | 28..519 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:54:25 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..621 | 1..621 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:37:10 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..621 | 1..621 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:05:21 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32457-RB | 1..621 | 1..621 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:15 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22987642..22988262 | 1..621 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:15 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22987642..22988262 | 1..621 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:43:15 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22987642..22988262 | 1..621 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:37:10 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22980742..22981362 | 1..621 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:30:50 Download gff for
IP20256.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22980742..22981362 | 1..621 | 100 | | Plus |
IP20256.hyp Sequence
Translation from 0 to 518
> IP20256.hyp
QTLSIHSFVMRRTWVLFYLFLIGLALVKTTPKELHSESIFEDDVALRSKS
SKADALLTKTTTKASASNLFFKVITTTRPPVTIRRVVAKSKGKDPERTDL
HRKHLTHHKHHSKNKKKNPHNRAEANRNKDHSPHDPHKNLKRKAEALPKS
NQNINGTTSLEAKSTSLKDVHK*
IP20256.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-PB | 163 | CG32457-PB | 1..163 | 10..172 | 846 | 100 | Plus |
CG32457-PC | 141 | CG32457-PC | 1..141 | 10..172 | 708 | 85.9 | Plus |
IP20256.pep Sequence
Translation from 0 to 518
> IP20256.pep
QTLSIHSFVMRRTWVLFYLFLIGLALVKTTPKELHSESIFEDDVALRSKS
SKADALLTKTTTKASASNLFFKVITTTRPPVTIRRVVAKSKGKDPERTDL
HRKHLTHHKHHSKNKKKNPHNRAEANRNKDHSPHDPHKNLKRKAEALPKS
NQNINGTTSLEAKSTSLKDVHK*
IP20256.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:08:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16658-PA | 188 | GG16658-PA | 1..170 | 10..170 | 406 | 58.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32457-PB | 163 | CG32457-PB | 1..163 | 10..172 | 846 | 100 | Plus |
CG32457-PC | 141 | CG32457-PC | 1..141 | 10..172 | 708 | 85.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19495-PA | 139 | GM19495-PA | 1..139 | 10..148 | 517 | 80.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17954-PA | 131 | GD17954-PA | 1..129 | 10..138 | 520 | 86 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:08:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18121-PA | 188 | GE18121-PA | 1..170 | 10..170 | 420 | 58.7 | Plus |