Clone IP20291 Report

Search the DGRC for IP20291

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:202
Well:91
Vector:pOT2
Associated Gene/TranscriptCG16970-RB
Protein status:IP20291.pep: wuzgold
Sequenced Size:2598

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16970 2008-05-05 Release 5.5 slip selected

Clone Sequence Records

IP20291.complete Sequence

2598 bp assembled on 2009-04-10

GenBank Submission: BT088442.1

> IP20291.complete
ACTCGACAGAAAAACGAGAGCTTGGAAATTTTGTGGTCCGTGATTATTAC
CTGGAGATCTTTGGTGAAAACTAATGCAAACACTCAGCATCTGCACCTGC
ACCAAAATCAAATAAAAAAAAAAAGGATGCTCCCAAATAGATACGTGTGT
GTGTGACCCAAAACGGGCAAAGTTGTAACGCAGAAAGCGCAATTTACAAA
CAAAATGCCAAGTGATTCGATTGTGTGAGAAGTCAGTGGAAAATCCATTA
AGCAGCGAAACGACAGACGTCAGTCTTCAATCAAATGTAGCGCCAAAAGT
CCAGGTTCAGACGTCTTGCCACTTGCAACTGCAACAGGAGCAAAAGCCAC
AAAAGGACACAAAGGATACGGAAGACAGCAGCAACAACTGCAACAGCGGG
GAGCGACGCAAACTATAGCCAAGCGTGAATGCGGTAGACGCGCGTCGAAG
CTGTAGAGGAACGCCTTCACATTGGATTACGCGCAGTTTTACTTTAGAGC
GGTGCCAATTAGTGGCCAACAGCAGCAACAACAACAGCAGCAACAGCACC
AGCAGCTCGTGCAGCAGCAATTGCTAGCCCAGCAGCAGCAGCAACTGCAG
ATACAGCAGCTGCAGCAACAATTGCTGCTGCAGCGACTCGAGCGTGAGTT
GCAGCAGAGTTACTCCTGCCTGCGGCAACGTTGGCTCACCGACTACGCAG
CCCCCCATCAGCAGCATCAGCAGATTGCCCAGCAGCAGCAGCTCTTTGCC
GCCCAGCAGTTGCAGTTGCAGCACCAGCAACTGCAGCACCAGCAGCAGCA
GCAACAACAACAACAACAACAGCAGCAGCAGCAGCAGTACAGCTACTACT
TCAGTCGCGGTAGCACCAACACCGATCTGGGTCTCGGACTGGGCCTGGGC
TTCGGTCTGGGCAGCGGCAATCTAGCCAGCTGGTACCATCTGCCGTCCAC
ATCGGCACACATCTATATTGGAACCACCAGCAGCGGCGGTGTACCGGGCA
GCGCACCGTATCCTCCGTATCCGTACCGGAGCGTGGGTGGATATTCCGGA
GGAGGTTATCCGGCAGCGGCGCTTATTAACTTCGATGCCTCGCCGACACC
GCTGTTAGCATCAGCGGGAACTTCACCCGGCTATTTGCCACCATTGGCCA
TTCCGGCAGCCTTACCACCACCGCCACCGGCGCCGAGTGTAGCCACCGAT
TATTACTTCAGCAGCCGGAGCACACGGACCGTTCCGCCACCGGTACCGCC
CACTCCGGCAGCCGTTGCAGCAGCGGCATCAGCATCAGCGGTCTCCACCT
CGCCGTTCCGTGAGTACGGGAGCGCGGCGGAGGAGCTGCAAGCTGGCTAT
CGCTACAAGGCCACACCCCGCAGGCGGTACGACGCCTACGACAACTACGG
CTATCTGCCTGGCTTTGCCAGCACCACTGAAGACGAGGAGGACCTGCTCG
AGGAGTGCCTGCCGCAGGAACTGCTCTCCACGGACTGCTCGAGTCTCGAG
GAACTGCGCTTCTTCCATCTGCAGGAGGAGGACGAGGACGAAGACGACGA
GGAGGTTGCCACGCAGCTGGCCCACATCCTTGACCTGCCGGATTTTCTAC
ATCCCTACGGCGGCAGCGGCCGGGACAGCCTGCACAGCCACAAGACGCCG
CCGCAACACGAGTACCAAACGGAGCACGGCTCAGCCGCAGCGGGAGGAGC
AGGATCGGCGGGATCAGACGGTCGGGGTGGTGGTGGTGGTCAGTCGCAGC
GTGTCCTTGAGGACCAGCGATATCAGCCCTACCAATACCAACAACAGCAG
CAGCAGCAGCATCATCAGCAGCAGCAGCAGCAACAACATCACCAGCAACA
TCAGTCGCACTTCCCACAGCAACATCAGCACTTCCAGCCGTCGCAGCAGC
AACTGCAGCAGCAGTCCTACCACTCGTACCAATATCCTTCGCAGGACAGC
TGCGAGGGCTTCAACCAATTCGCCACCAACGCGGGCAGCTGCCTGGGCAA
TCAGAGAATGATGGTTAGCAAATTGTGGAACAGCTGCTTCCCGGAGTTCA
CCCCGGACCATGTGCATCGACACAACTTTTACCTATGCCAGTGGCAACGG
AACACGCAGGTGCGCATCGTTTACCTGTTCTACCGATGGATAACGGCCAT
CACCTGCCTGGCGGCACTGGTCTGCTCCTTGCTGGACATTGGGCGCACGG
ACGAGCACTTTGAGCACCACTATGCCAAGTGGTGGATCTACCTGACCCAC
TGGGGACTGCTCTTCTGCACAGTCCAGGCCTGGCTGGCCGCCTGGATAGT
GACCCAGGGCATGATGGTGGAGCGCGAGGACTTCGAGATTGTGCGGCAGG
CGAAGAAGAGCCGCCTGCACCACTTGTACTGGGTGCTCTACACCTGTGCC
ACTGTCTATGCGTTCATCGTCACCATGTGCTATTGGCTACTGGTCCACAA
TCCCGGTAAGTGAACCATATTGGCGAAAAGTTACAGTTTCAAACGACAAA
GCTCTGAAAACTAGTATGAATACGTACCTTTTCTTATAGTTGACATTTTT
CTTCAGACAATATATTCCACGATGATAAAAAAAAAAAAAAAAAAAAAA

IP20291.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG16970-RB 2578 CG16970-RB 5..2578 1..2576 12825 99.9 Plus
CG16970-RA 2240 CG16970-RA 177..2240 513..2576 10320 100 Plus
CG16970-RA 2240 CG16970-RA 29..176 305..452 740 100 Plus
Sp1-RD 3243 Sp1-RD 2523..2582 1789..1848 195 88.3 Plus
Sp1-RD 3243 Sp1-RD 2502..2564 1792..1854 195 87.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:17:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13307080..13308245 2091..926 5830 100 Minus
chr2L 23010047 chr2L 13308310..13308937 929..302 3110 99.7 Minus
chr2L 23010047 chr2L 13306484..13306970 2576..2090 2345 98.8 Minus
chr2L 23010047 chr2L 13329470..13329773 306..1 1465 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 18:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
CR41504-RA 789 CR41504-RA 162..220 1794..1852 190 88.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:17:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13308410..13309575 2091..926 5830 100 Minus
2L 23513712 2L 13309640..13310267 929..302 3140 100 Minus
2L 23513712 2L 13307813..13308300 2577..2090 2440 100 Minus
2L 23513712 2L 13330797..13331100 306..1 1465 99.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:46:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13308410..13309575 2091..926 5830 100 Minus
2L 23513712 2L 13309640..13310267 929..302 3140 100 Minus
2L 23513712 2L 13307813..13308300 2577..2090 2440 100 Minus
2L 23513712 2L 13330797..13331100 306..1 1475 99.3 Minus
3L 28103327 3L 9702057..9702182 1787..1912 240 79.3 Plus
X 23527363 X 17756933..17756987 1800..1854 215 92.7 Plus
X 23527363 X 3914486..3914545 1854..1795 210 90 Minus
X 23527363 X 6543922..6543974 1795..1847 205 92.4 Plus
3R 31820162 3R 24873969..24874036 1787..1854 205 86.7 Plus
3R 31820162 3R 23661327..23661382 1850..1795 205 91 Minus
X 23527363 X 9763176..9763235 1789..1848 195 88.3 Plus
X 23527363 X 9763155..9763217 1792..1854 195 87.3 Plus
3L 28103327 3L 12322798..12322857 1795..1854 195 88.3 Plus
2R 25260384 2R 20168929..20168985 1798..1854 195 89.4 Plus
X 23527363 X 21318395..21318450 1853..1798 190 89.2 Minus
3R 31820162 3R 31111226..31111281 1795..1850 190 89.2 Plus
Y 3410481 Y 2897133..2897191 1794..1852 190 88.1 Plus
Blast to na_te.dros performed 2019-03-15 20:17:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6695..6875 1755..1936 403 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..6959 1763..1995 401 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2314..2540 1760..1978 360 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6762..6915 1760..1913 348 71.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2281..2517 1748..1992 331 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2358..2524 1741..1913 302 65.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6858 1808..1946 245 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2728..2866 1773..1913 225 65.5 Plus
roo 9092 roo DM_ROO 9092bp 1049..1162 1805..1914 218 68.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2445 1834..1980 195 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6868..7179 516..839 187 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6784..7132 325..657 181 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6886 1833..2000 176 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6854 1831..1980 164 60 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3190..3316 1788..1913 146 58.3 Plus
roo 9092 roo DM_ROO 9092bp 1023..1160 284..419 126 59.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3261..3351 302..397 126 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1458..1596 266..412 119 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1473..1580 1811..1914 115 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2767..2831 339..399 115 72.3 Plus

IP20291.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:18:20 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13307080..13307291 1880..2091 100 == Minus
chr2L 13306484..13306968 2092..2576 98 <- Minus
chr2L 13307383..13308241 930..1788 100 <- Minus
chr2L 13308310..13308384 855..929 100 == Minus
chr2L 13308487..13308617 622..752 99 == Minus
chr2L 13308724..13308934 305..515 99 <- Minus
chr2L 13329472..13329773 1..304 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:58:16 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG16970-RA 24..176 300..452 98 == Plus
CG16970-RA 177..2127 513..2463 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:45:24 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG16970-RA 24..176 300..452 98 == Plus
CG16970-RA 177..2127 513..2463 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:51:04 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG43778-RC 1..1992 472..2463 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:14 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG43778-RC 1..1992 472..2463 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:42:11 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:58:11 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG16970-RA 177..2127 513..2463 100   Plus
CG16970-RA 24..176 300..452 98 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:45:23 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG16970-RB 1..2574 1..2576 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:04 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG43778-RC 22..2595 1..2576 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:14 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
CG43778-RC 22..2595 1..2576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:20 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13307814..13308298 2092..2576 100 <- Minus
2L 13308410..13309571 930..2091 100 <- Minus
2L 13309640..13310264 305..929 100 <- Minus
2L 13330799..13331100 1..304 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:20 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13307814..13308298 2092..2576 100 <- Minus
2L 13308410..13309571 930..2091 100 <- Minus
2L 13309640..13310264 305..929 100 <- Minus
2L 13330799..13331100 1..304 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:18:20 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13307814..13308298 2092..2576 100 <- Minus
2L 13308410..13309571 930..2091 100 <- Minus
2L 13309640..13310264 305..929 100 <- Minus
2L 13330799..13331100 1..304 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:04 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13307814..13308298 2092..2576 100 <- Minus
arm_2L 13308410..13309571 930..2091 100 <- Minus
arm_2L 13309640..13310264 305..929 100 <- Minus
arm_2L 13330799..13331100 1..304 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:20:40 Download gff for IP20291.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13307814..13308298 2092..2576 100 <- Minus
2L 13308410..13309571 930..2091 100 <- Minus
2L 13309640..13310264 305..929 100 <- Minus
2L 13330799..13331100 1..304 99   Minus

IP20291.hyp Sequence

Translation from 2007 to 2462

> IP20291.hyp
MMVSKLWNSCFPEFTPDHVHRHNFYLCQWQRNTQVRIVYLFYRWITAITC
LAALVCSLLDIGRTDEHFEHHYAKWWIYLTHWGLLFCTVQAWLAAWIVTQ
GMMVEREDFEIVRQAKKSRLHHLYWVLYTCATVYAFIVTMCYWLLVHNPG
K*

IP20291.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:07:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG43778-PC 663 CG43778-PC 513..663 1..151 866 100 Plus
CG43778-PD 451 CG43778-PD 1..149 1..149 855 100 Plus
CG43778-PA 963 CG43778-PA 513..661 1..149 855 100 Plus
rost-PC 275 CG9552-PC 28..148 22..147 165 30 Plus
rost-PB 275 CG9552-PB 28..148 22..147 165 30 Plus

IP20291.pep Sequence

Translation from 2007 to 2462

> IP20291.pep
MMVSKLWNSCFPEFTPDHVHRHNFYLCQWQRNTQVRIVYLFYRWITAITC
LAALVCSLLDIGRTDEHFEHHYAKWWIYLTHWGLLFCTVQAWLAAWIVTQ
GMMVEREDFEIVRQAKKSRLHHLYWVLYTCATVYAFIVTMCYWLLVHNPG
K*

IP20291.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21674-PA 956 GF21674-PA 806..954 1..149 869 99.3 Plus
Dana\GF22126-PA 275 GF22126-PA 19..149 13..148 139 30 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10211-PA 662 GG10211-PA 512..662 1..151 871 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25109-PA 752 GH25109-PA 602..752 1..151 867 98.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG43778-PC 663 CG43778-PC 513..663 1..151 866 100 Plus
CG43778-PD 451 CG43778-PD 1..149 1..149 855 100 Plus
CG43778-PA 963 CG43778-PA 513..661 1..149 855 100 Plus
rost-PC 275 CG9552-PC 28..148 22..147 165 30 Plus
rost-PB 275 CG9552-PB 28..148 22..147 165 30 Plus
rost-PA 275 CG9552-PA 28..148 22..147 165 30 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14079-PA 502 GI14079-PA 380..502 29..151 695 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25614-PA 711 GL25614-PA 556..705 1..150 847 98.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14245-PA 706 GA14245-PA 553..702 1..150 852 98.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25652-PA 693 GM25652-PA 543..693 1..151 870 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22071-PA 689 GD22071-PA 539..689 1..151 864 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18268-PA 692 GJ18268-PA 542..692 1..151 858 98.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15292-PA 623 GK15292-PA 462..610 1..148 787 96.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11732-PA 799 GE11732-PA 649..797 1..149 869 100 Plus
Dyak\GE10654-PA 275 GE10654-PA 28..149 22..148 140 30.5 Plus