IP20458.complete Sequence
1164 bp assembled on 2008-05-14
GenBank Submission: BT032740
> IP20458.complete
AGCAGCTCCAGTTAAGTCATAATGGCCAGATATCAGAGTAGCCTTAGCCT
CGGAATCCTTGTGGTCCTGCTAATCGATCAGCTGGCCAACGCCCAGTTCG
TTCCGGGCCCAATCTCTGGACCAATTCCCCGCCAGCAGAGATCGCTCTTT
GGGTCCGGTCCGCCGCCCGGTTGGAGTAGCGGTGGCCTCAGTCACGGCTG
GAATAGTCCCAGCTTTGAGTTTAGCCCGCTGCCGCCATCGCACAGTTCGC
ATGTGACCAAGGACGAGTTGCTGGCCCTGCTAGCCGCCTGGAAGGATGTG
GCCAAGCCGACGACTCCGGCACCGGAGCCAGAGCCCGAGGAGCCCGAACC
CGAGCCGGAGGCCACAACGCCAGCGCCGCCAGAGGATGTGGACGAACCGG
AACCGGAGCCCGAGGCACCGGCACCGGCACCGGCACCAGAGGCGCCAGCT
GGTCCACCACCCGGCGTTCCCGTCACCGTCTCCCTGCCCGCCCTGGTGCC
CATTCAATTGGCGGCCATGTGGCAACAGCCGGCGCTGGGAGCAGCGGCCG
GCGGACTGGGTCCTCTAAATCTGGGCGGCCTGGGTCTGGGCGGTGGCATT
GCATTGAACACGCTCGGCGGCGGTGCGGTAGCAGCCGGAGGAGCTATAGC
GGCCGGAGGCGGTGGAGCGGCGGCCGCCGGAGCAGCAGCAGCAGCGTCAC
GTTCCGGAGTGGCACGCCCTCGAGCCCGGGCCAGGATCGGAGGACGTGCG
TCCAATGCCCAGCAGCCCGCCATACGTTTCCCGGTGGCCAATCCGCGCAG
CTTCACCTCGAACAACTATGTGGCGCCCAGGCCGCGTTATTATCGCGATA
CGGAGCCCATGCGCGTCAACGTAATGGCACCACCGCCGCCGTCGCCCTAC
CAAATGGCCAATATCCAGGGTCCCGTTCAGCTGGTGCCCGCCTACTGGCA
ATAGGCCCATTATTCAGCTACCAAGTCTTACAAGTCGTACTGCCACTTCT
CTCTAAGCTAAACTGTACAAAGTTATATGTTATAGTAATACGCGCCAGTG
CATATAGAATATAGAATGCCATGGCCTGTTAACAAGTCGTATGTATGTAT
GTTTTTTTTTTTTTGATTATACCAATAAAATATTTTAACAAACTATAAAA
AAAAAAAAAAAAAA
IP20458.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:57:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449.a | 1660 | CG42449.a | 514..1660 | 1..1147 | 5735 | 100 | Plus |
CG42449-RA | 1255 | CG42449-RA | 109..1255 | 1..1147 | 5735 | 100 | Plus |
CG42449-RB | 1218 | CG42449-RB | 1..863 | 1..863 | 4315 | 100 | Plus |
CG42449-RB | 1218 | CG42449-RB | 934..1218 | 863..1147 | 1425 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 5575644..5576506 | 1..863 | 4285 | 99.8 | Plus |
chrX | 22417052 | chrX | 5576577..5576860 | 863..1146 | 1420 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:42:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:56:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5683240..5684102 | 1..863 | 4315 | 100 | Plus |
X | 23542271 | X | 5684173..5684457 | 863..1147 | 1425 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:53:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 5691338..5692200 | 1..863 | 4315 | 100 | Plus |
X | 23527363 | X | 5692271..5692555 | 863..1147 | 1425 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 14:56:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 639..753 | 697..587 | 132 | 62.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2860 | 622..699 | 120 | 61.5 | Plus |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 1902..1952 | 1092..1142 | 120 | 70.6 | Plus |
IP20458.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:57:39 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 5575644..5576506 | 1..863 | 99 | -> | Plus |
chrX | 5576578..5576860 | 864..1146 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:21:11 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..933 | 22..954 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:50:06 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..933 | 22..954 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:53:00 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..933 | 22..954 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 14:49:29 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:17:56 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..933 | 22..954 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:13:02 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..1146 | 1..1146 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:50:06 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..1146 | 1..1146 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:53:00 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..1146 | 1..1146 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 14:49:29 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:17:56 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 1..1146 | 1..1146 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:57:39 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5683240..5684102 | 1..863 | 100 | -> | Plus |
X | 5684174..5684456 | 864..1146 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:57:39 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5683240..5684102 | 1..863 | 100 | -> | Plus |
X | 5684174..5684456 | 864..1146 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:57:39 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5683240..5684102 | 1..863 | 100 | -> | Plus |
X | 5684174..5684456 | 864..1146 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:53:00 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5578207..5578489 | 864..1146 | 100 | | Plus |
arm_X | 5577273..5578135 | 1..863 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:28:49 Download gff for
IP20458.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5691338..5692200 | 1..863 | 100 | -> | Plus |
X | 5692272..5692554 | 864..1146 | 100 | | Plus |
IP20458.pep Sequence
Translation from 21 to 953
> IP20458.pep
MARYQSSLSLGILVVLLIDQLANAQFVPGPISGPIPRQQRSLFGSGPPPG
WSSGGLSHGWNSPSFEFSPLPPSHSSHVTKDELLALLAAWKDVAKPTTPA
PEPEPEEPEPEPEATTPAPPEDVDEPEPEPEAPAPAPAPEAPAGPPPGVP
VTVSLPALVPIQLAAMWQQPALGAAAGGLGPLNLGGLGLGGGIALNTLGG
GAVAAGGAIAAGGGGAAAAGAAAAASRSGVARPRARARIGGRASNAQQPA
IRFPVANPRSFTSNNYVAPRPRYYRDTEPMRVNVMAPPPPSPYQMANIQG
PVQLVPAYWQ*
IP20458.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:10:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF21368-PA | 293 | GF21368-PA | 17..293 | 20..310 | 397 | 62.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:10:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18775-PA | 305 | GG18775-PA | 1..305 | 1..310 | 866 | 85.5 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:10:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH12674-PA | 266 | GH12674-PA | 20..266 | 21..310 | 230 | 43.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449-PA | 310 | CG42449-PA | 1..310 | 1..310 | 1637 | 100 | Plus |
CG42449-PB | 281 | CG42449-PB | 1..281 | 1..281 | 1475 | 100 | Plus |
CG13358-PD | 301 | CG13358-PB | 10..191 | 10..197 | 230 | 34.8 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:10:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI16251-PA | 277 | GI16251-PA | 7..277 | 6..310 | 315 | 45.5 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:10:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL18238-PA | 300 | GL18238-PA | 39..300 | 37..310 | 356 | 57.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:10:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13951-PA | 300 | GA13951-PA | 39..300 | 37..310 | 356 | 57.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:10:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM12426-PA | 142 | GM12426-PA | 1..142 | 166..310 | 431 | 90.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD16743-PA | 304 | GD16743-PA | 1..304 | 1..310 | 857 | 86.8 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:10:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ16716-PA | 281 | GJ16716-PA | 224..281 | 251..310 | 149 | 50.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:10:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19971-PA | 290 | GK19971-PA | 12..290 | 14..310 | 232 | 44.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:10:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16418-PA | 300 | GE16418-PA | 1..300 | 1..310 | 843 | 84.5 | Plus |
IP20458.hyp Sequence
Translation from 21 to 953
> IP20458.hyp
MARYQSSLSLGILVVLLIDQLANAQFVPGPISGPIPRQQRSLFGSGPPPG
WSSGGLSHGWNSPSFEFSPLPPSHSSHVTKDELLALLAAWKDVAKPTTPA
PEPEPEEPEPEPEATTPAPPEDVDEPEPEPEAPAPAPAPEAPAGPPPGVP
VTVSLPALVPIQLAAMWQQPALGAAAGGLGPLNLGGLGLGGGIALNTLGG
GAVAAGGAIAAGGGGAAAAGAAAAASRSGVARPRARARIGGRASNAQQPA
IRFPVANPRSFTSNNYVAPRPRYYRDTEPMRVNVMAPPPPSPYQMANIQG
PVQLVPAYWQ*
IP20458.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449-PA | 310 | CG42449-PA | 1..310 | 1..310 | 1637 | 100 | Plus |
CG42449-PB | 281 | CG42449-PB | 1..281 | 1..281 | 1475 | 100 | Plus |
CG13358-PD | 301 | CG13358-PB | 10..191 | 10..197 | 230 | 34.8 | Plus |