IP20534.complete Sequence
652 bp assembled on 2008-05-22
GenBank Submission: BT032745
> IP20534.complete
GTTAATCGAAGCCTCTCAGCAGGCCCTTGATTTTATCATCGATAGTTTAA
CATGCTGGAAAATTGGTGAAAAGAGTCAGGTCGTAGCAAAATGAGTGATT
TGGTAGGTATCGTTTATAATGACTATCCCATGGAGAGCGAGGAGGATTTC
AATAGGCGCAGGAGGGATCTTGATAATATATTTTTCAACTGCAGCACAAG
GAAAAATCAGGAACAACAATTCGAAGCCAAGCGTCCCATACTAAACTCAT
CGAACTACAATAAGATATTCGGAGCATCTTTGGGAGATGACATGGACTTC
GAGGACTTTCCCGACCTCAACCAACCACTGCCAAATATTTCCATTCACGA
GCAACTGCGTCTGGCTTCCGGGAACCGCGAGATAATCGCGAGCATTCAGC
GAAATCACCAAAAGCGACTCGAAAACCTTTGGCACTCGGAACTAATAGAA
AAACTAGCGCAAGAGTAAAAGCAATTCTAGTTAGAGATAGAAGTTGCTTT
TGGGTTTTCCTTCAGAGATTTCTCACAAAAAATATTAAATAAAATGTATT
GGTAAAGCCCTGATTACCATGTAAGTTGTTACCAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
IP20534.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-RA | 636 | CG17650-RA | 50..636 | 1..587 | 2935 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:18:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 1758095..1758468 | 583..209 | 1810 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 1758740..1758950 | 211..1 | 1040 | 99.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:18:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1758282..1758660 | 587..209 | 1895 | 100 | Minus |
2L | 23513712 | 2L | 1758932..1759142 | 211..1 | 1055 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1758282..1758660 | 587..209 | 1895 | 100 | Minus |
2L | 23513712 | 2L | 1758932..1759142 | 211..1 | 1055 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:18:33 has no hits.
IP20534.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:19:36 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 1758095..1758466 | 211..583 | 99 | <- | Minus |
chr2L | 1758741..1758950 | 1..210 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:21:38 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..378 | 91..468 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:38:21 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..378 | 91..468 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:52:52 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..378 | 91..468 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:44:13 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..378 | 91..468 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:15:03 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..378 | 91..468 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:07:39 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..519 | 65..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:38:21 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..519 | 65..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:52:52 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..534 | 50..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:44:13 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..519 | 65..583 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:03 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17650-RA | 1..534 | 50..583 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:19:36 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1758286..1758658 | 211..583 | 100 | <- | Minus |
2L | 1758933..1759142 | 1..210 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:19:36 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1758286..1758658 | 211..583 | 100 | <- | Minus |
2L | 1758933..1759142 | 1..210 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:19:36 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1758286..1758658 | 211..583 | 100 | <- | Minus |
2L | 1758933..1759142 | 1..210 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:52:52 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1758933..1759142 | 1..210 | 100 | | Minus |
arm_2L | 1758286..1758658 | 211..583 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:21:00 Download gff for
IP20534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1758933..1759142 | 1..210 | 100 | | Minus |
2L | 1758286..1758658 | 211..583 | 100 | <- | Minus |
IP20534.pep Sequence
Translation from 90 to 467
> IP20534.pep
MSDLVGIVYNDYPMESEEDFNRRRRDLDNIFFNCSTRKNQEQQFEAKRPI
LNSSNYNKIFGASLGDDMDFEDFPDLNQPLPNISIHEQLRLASGNREIIA
SIQRNHQKRLENLWHSELIEKLAQE*
IP20534.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:54:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24574-PA | 139 | GG24574-PA | 1..132 | 1..123 | 308 | 60.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-PA | 125 | CG17650-PA | 1..125 | 1..125 | 655 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:54:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16593-PA | 126 | GM16593-PA | 1..126 | 1..125 | 504 | 78.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:54:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22894-PA | 126 | GD22894-PA | 1..126 | 1..125 | 513 | 79.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:54:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15423-PA | 133 | GE15423-PA | 1..133 | 1..124 | 384 | 60.9 | Plus |
IP20534.hyp Sequence
Translation from 90 to 467
> IP20534.hyp
MSDLVGIVYNDYPMESEEDFNRRRRDLDNIFFNCSTRKNQEQQFEAKRPI
LNSSNYNKIFGASLGDDMDFEDFPDLNQPLPNISIHEQLRLASGNREIIA
SIQRNHQKRLENLWHSELIEKLAQE*
IP20534.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:11:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17650-PA | 125 | CG17650-PA | 1..125 | 1..125 | 655 | 100 | Plus |