IP20547.complete Sequence
562 bp assembled on 2008-05-14
GenBank Submission: BT032945
> IP20547.complete
ACCGTTTGCTATAAAATGTATTTTGGCAAAGTAATTTCACTGTTTCTATT
TTGTTTTCTGTTGGGAGGCATTTGGGCTCAGGATGTTATACCAGAGATAC
CAGAAGATGTTAGGCCAACGGAGCCCACGACAACTACAACAACAGATGCC
ACAAGAACCTCTACAACAAAATCCACCACAACTACAACAACGGAACCCAC
CACAACCACTTCAACAACGAAACCCATCACGACTTCAACAACACAAAGGC
CTCCCTTTGAGCAACCCACACGGACAACCGAGATTCCTGGGGTGTGGATG
CAACCGATAGAAAGATGCTTTCTGAGAAATCAGATGAAGTATAATACTTG
CTGGCCAGTCCCACCGAGGGCCACTTGTTATCGCTGCTGCTACTACTACG
ACAGCCATATCACCGAATGTAGTAAGCTCCACCAAGGGCCTTGTGTGGCG
TATGATTATGGCCAACTGAAAGTGCACGTAAATTGGAAACAAGTATTGTA
AAAAGAAATTAAGCAGGAACAGAAATAAAAACAGTAAAATGCTTGAAAAA
AAAAAAAAAAAA
IP20547.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:57:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34054-RA | 850 | CG34054-RA | 193..739 | 1..547 | 2735 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:49:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 7297563..7297912 | 350..1 | 1735 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 7297284..7297479 | 545..350 | 965 | 99.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:49:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11410089..11410438 | 350..1 | 1750 | 100 | Minus |
2R | 25286936 | 2R | 11409808..11410005 | 547..350 | 990 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 11411288..11411637 | 350..1 | 1750 | 100 | Minus |
2R | 25260384 | 2R | 11411007..11411204 | 547..350 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 17:49:22 has no hits.
IP20547.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:50:06 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 7297284..7297479 | 350..545 | 99 | <- | Minus |
chr2R | 7297564..7297912 | 1..349 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:21:40 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:49:33 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:39:37 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:48:49 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:20:05 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:12:22 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:49:33 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..545 | 1..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:39:37 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..545 | 1..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:48:50 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..486 | 16..501 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:20:05 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34054-RA | 1..545 | 1..545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:50:06 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11409810..11410005 | 350..545 | 100 | <- | Minus |
2R | 11410090..11410438 | 1..349 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:50:06 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11409810..11410005 | 350..545 | 100 | <- | Minus |
2R | 11410090..11410438 | 1..349 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:50:06 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11409810..11410005 | 350..545 | 100 | <- | Minus |
2R | 11410090..11410438 | 1..349 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:39:37 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7297595..7297943 | 1..349 | 100 | | Minus |
arm_2R | 7297315..7297510 | 350..545 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:28:29 Download gff for
IP20547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11411009..11411204 | 350..545 | 100 | <- | Minus |
2R | 11411289..11411637 | 1..349 | 100 | | Minus |
IP20547.pep Sequence
Translation from 0 to 500
> IP20547.pep
TVCYKMYFGKVISLFLFCFLLGGIWAQDVIPEIPEDVRPTEPTTTTTTDA
TRTSTTKSTTTTTTEPTTTTSTTKPITTSTTQRPPFEQPTRTTEIPGVWM
QPIERCFLRNQMKYNTCWPVPPRATCYRCCYYYDSHITECSKLHQGPCVA
YDYGQLKVHVNWKQVL*
IP20547.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34054-PA | 161 | CG34054-PA | 1..161 | 6..166 | 900 | 100 | Plus |
CG30026-PB | 228 | CG30026-PB | 10..219 | 19..155 | 249 | 34.1 | Plus |
CG6912-PA | 433 | CG6912-PA | 90..164 | 39..106 | 161 | 50 | Plus |
CG6912-PA | 433 | CG6912-PA | 90..156 | 34..96 | 150 | 52.2 | Plus |
Muc96D-PA | 881 | CG31439-PA | 631..685 | 39..93 | 149 | 58.2 | Plus |
CG6912-PA | 433 | CG6912-PA | 106..165 | 40..96 | 148 | 56.7 | Plus |
CG34220-PA | 726 | CG34220-PA | 537..593 | 40..96 | 147 | 57.9 | Plus |
CG43798-PA | 213 | CG43798-PA | 129..191 | 31..92 | 146 | 50.8 | Plus |
Muc96D-PA | 881 | CG31439-PA | 518..574 | 40..96 | 146 | 56.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:07:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20427-PA | 161 | GM20427-PA | 1..161 | 6..166 | 616 | 91.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:07:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15251-PA | 161 | GD15251-PA | 1..161 | 6..166 | 608 | 90.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:07:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13521-PA | 177 | GE13521-PA | 1..177 | 6..166 | 438 | 58.2 | Plus |
IP20547.hyp Sequence
Translation from 0 to 500
> IP20547.hyp
TVCYKMYFGKVISLFLFCFLLGGIWAQDVIPEIPEDVRPTEPTTTTTTDA
TRTSTTKSTTTTTTEPTTTTSTTKPITTSTTQRPPFEQPTRTTEIPGVWM
QPIERCFLRNQMKYNTCWPVPPRATCYRCCYYYDSHITECSKLHQGPCVA
YDYGQLKVHVNWKQVL*
IP20547.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:11:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34054-PA | 161 | CG34054-PA | 1..161 | 6..166 | 900 | 100 | Plus |
CG30026-PB | 228 | CG30026-PB | 10..219 | 19..155 | 249 | 34.1 | Plus |
CG6912-PA | 433 | CG6912-PA | 90..164 | 39..106 | 161 | 50 | Plus |
CG6912-PA | 433 | CG6912-PA | 90..156 | 34..96 | 150 | 52.2 | Plus |
Muc96D-PA | 881 | CG31439-PA | 631..685 | 39..93 | 149 | 58.2 | Plus |
CG6912-PA | 433 | CG6912-PA | 106..165 | 40..96 | 148 | 56.7 | Plus |
CG43798-PA | 213 | CG43798-PA | 129..191 | 31..92 | 146 | 50.8 | Plus |