IP20624.complete Sequence
1151 bp assembled on 2008-12-12
GenBank Submission: BT053712.1
> IP20624.complete
CAAATTTGAAGTACTAACACCAAGTCTCCAAAATGTCAAAACCAGTTTTT
ATTAAAATTGTAAACAAAGAAAAAATGTTTAATATATATTATATGTAATT
GAAAGGCACGAACTTGCCATGCCGAGCTAAACATCCAATCCTCAAAGGTT
CCACCGACCGAAAACAAAGAATCATTGAGCTTCTATCCCAAACCAGAGTC
GCCGAATCCCAAAACGAGTTGAGAGCCGCCGTCAAAGTGCGGAAAAGTGT
GGAAAACTGAACTGGCTTTTCTGCTGGCTGCGGCAGAGGAAACGTTATTT
CCAGGAAATGCACTTAGCTCTTTCACTCCGTCTCGTTTGTGTCTTTTTCG
TTACCTCTCGTGCTGAGTGAAAATTTGAGGACCCAATCGCTAGGAACTTT
CTTTTGATCAAGTGAGAAATTGGTGTGCGAAAAACGCCAGTTGGAAAAGC
TCACTCACTCGGAAAACAGCATTTGCGAGGCGGGATGTGAGAACGAAAGC
GAAACAATTCCGATCCGAGCGAAGATTCCAAGGCACAGATGCCAGGGAGG
CCAGAAAAGCCCATGGAGCTAATTAAGCCGCCTCGCATGAGTGCTGTGTG
GTTTTCCACGGGGCCAGAGGTTGAGGGTGGCTCTGCATCAAGGGAAAGCA
CTAACTGCAACATCAACATCAACAGCAACATTAGCAACAAGAGCAACAAA
GATGAGAAATCGCTGGCTTCCTGGCTTCATGAAGAAATAAGTCTAGATTG
CCAGTTGGGGAAAAACTTGTTCATCTTTGGCTCTAACGAGCTAACGGAGC
GACAAGCGGACAAGCGGACAAGCAGCGGACCAACCGAACTGATGGGCGGA
CATTCCGGCGGACGGACGGACAACTGTGAGCGATTCCACACAAAACAAGA
CGATGGGTAAACAACCAGGCAGCAAAAACAAGAGCAGCGGCACAAGTAGC
AAATGGCAAGTGCAAGTGTAACAGCAACGGACTTTTGTACTTTCCTGAAG
ATGGCCTCGTGATCACGAGATCTAAGCCAGATCTGAATGGAGCAAGCAAA
ACGAAATTGAAGGATCGATTTTGGCATCGAAATAATATTAGAAAAAAATG
GAAGGGAAATAAAGAAATGTGAAAAATATAACAAAAAAAAAAAAAAAAAA
A
IP20624.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:15:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33284-RA | 1132 | CG33284-RA | 1..1132 | 1..1132 | 5645 | 99.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 21112763..21113894 | 1..1132 | 5645 | 99.9 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21123753..21124885 | 1..1133 | 5650 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 21116853..21117985 | 1..1133 | 5650 | 99.9 | Plus |
Blast to na_te.dros performed 2019-03-16 14:36:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2358..2445 | 633..720 | 161 | 67.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6837 | 633..698 | 149 | 74.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2408 | 647..699 | 148 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6505..6772 | 439..699 | 142 | 55.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6848..6954 | 633..743 | 139 | 62.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6782..6846 | 633..698 | 138 | 69.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2362..2413 | 647..698 | 134 | 73.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6793 | 633..699 | 133 | 68.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6813 | 633..698 | 128 | 67.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2290..2359 | 625..698 | 117 | 66.2 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 1254..1316 | 810..872 | 116 | 68.8 | Plus |
TART-A | 13424 | TART-A 13424bp | 10160..10212 | 892..946 | 116 | 72.7 | Plus |
IP20624.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:38:21 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 21113634..21113894 | 872..1132 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:04:11 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 563..910 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:20 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 563..910 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:36:47 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 563..910 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:33:39 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 563..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-12 16:24:33 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..348 | 563..910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:20 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..1132 | 1..1132 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:36:47 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..1132 | 1..1132 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:33:39 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33284-RA | 1..1132 | 1..1132 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21123753..21124884 | 1..1132 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21123753..21124884 | 1..1132 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21123753..21124884 | 1..1132 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:36:47 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21116853..21117984 | 1..1132 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:04 Download gff for
IP20624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21116853..21117984 | 1..1132 | 99 | | Plus |
IP20624.pep Sequence
Translation from 538 to 909
> IP20624.pep
MPGRPEKPMELIKPPRMSAVWFSTGPEVEGGSASRESTNCNININSNISN
KSNKDEKSLASWLHEEISLDCQLGKNLFIFGSNELTERQADKRTSSGPTE
LMGGHSGGRTDNCERFHTKQDDG*
IP20624.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20074-PA | 65 | GF20074-PA | 1..63 | 17..71 | 151 | 55.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:11:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16159-PA | 96 | GG16159-PA | 1..94 | 1..92 | 452 | 94.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33284-PA | 115 | CG33284-PA | 1..115 | 9..123 | 612 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:11:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22341-PA | 139 | GM22341-PA | 1..96 | 9..112 | 364 | 83.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:11:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14934-PA | 106 | GD14934-PA | 1..98 | 9..110 | 344 | 83.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:12:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23255-PA | 112 | GE23255-PA | 1..104 | 1..110 | 353 | 75.9 | Plus |
Dyak\GE19728-PA | 96 | GE19728-PA | 1..94 | 1..92 | 349 | 86.2 | Plus |
IP20624.hyp Sequence
Translation from 538 to 909
> IP20624.hyp
MPGRPEKPMELIKPPRMSAVWFSTGPEVEGGSASRESTNCNININSNISN
KSNKDEKSLASWLHEEISLDCQLGKNLFIFGSNELTERQADKRTSSGPTE
LMGGHSGGRTDNCERFHTKQDDG*
IP20624.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:13:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33284-PA | 115 | CG33284-PA | 1..115 | 9..123 | 612 | 100 | Plus |