Clone IP20624 Report

Search the DGRC for IP20624

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:206
Well:24
Vector:pOT2
Associated Gene/TranscriptCG33284-RA
Protein status:IP20624.pep: gold
Sequenced Size:1151

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33284 2008-12-18 5.12 accounting

Clone Sequence Records

IP20624.complete Sequence

1151 bp assembled on 2008-12-12

GenBank Submission: BT053712.1

> IP20624.complete
CAAATTTGAAGTACTAACACCAAGTCTCCAAAATGTCAAAACCAGTTTTT
ATTAAAATTGTAAACAAAGAAAAAATGTTTAATATATATTATATGTAATT
GAAAGGCACGAACTTGCCATGCCGAGCTAAACATCCAATCCTCAAAGGTT
CCACCGACCGAAAACAAAGAATCATTGAGCTTCTATCCCAAACCAGAGTC
GCCGAATCCCAAAACGAGTTGAGAGCCGCCGTCAAAGTGCGGAAAAGTGT
GGAAAACTGAACTGGCTTTTCTGCTGGCTGCGGCAGAGGAAACGTTATTT
CCAGGAAATGCACTTAGCTCTTTCACTCCGTCTCGTTTGTGTCTTTTTCG
TTACCTCTCGTGCTGAGTGAAAATTTGAGGACCCAATCGCTAGGAACTTT
CTTTTGATCAAGTGAGAAATTGGTGTGCGAAAAACGCCAGTTGGAAAAGC
TCACTCACTCGGAAAACAGCATTTGCGAGGCGGGATGTGAGAACGAAAGC
GAAACAATTCCGATCCGAGCGAAGATTCCAAGGCACAGATGCCAGGGAGG
CCAGAAAAGCCCATGGAGCTAATTAAGCCGCCTCGCATGAGTGCTGTGTG
GTTTTCCACGGGGCCAGAGGTTGAGGGTGGCTCTGCATCAAGGGAAAGCA
CTAACTGCAACATCAACATCAACAGCAACATTAGCAACAAGAGCAACAAA
GATGAGAAATCGCTGGCTTCCTGGCTTCATGAAGAAATAAGTCTAGATTG
CCAGTTGGGGAAAAACTTGTTCATCTTTGGCTCTAACGAGCTAACGGAGC
GACAAGCGGACAAGCGGACAAGCAGCGGACCAACCGAACTGATGGGCGGA
CATTCCGGCGGACGGACGGACAACTGTGAGCGATTCCACACAAAACAAGA
CGATGGGTAAACAACCAGGCAGCAAAAACAAGAGCAGCGGCACAAGTAGC
AAATGGCAAGTGCAAGTGTAACAGCAACGGACTTTTGTACTTTCCTGAAG
ATGGCCTCGTGATCACGAGATCTAAGCCAGATCTGAATGGAGCAAGCAAA
ACGAAATTGAAGGATCGATTTTGGCATCGAAATAATATTAGAAAAAAATG
GAAGGGAAATAAAGAAATGTGAAAAATATAACAAAAAAAAAAAAAAAAAA
A

IP20624.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-RA 1132 CG33284-RA 1..1132 1..1132 5645 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:37:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21112763..21113894 1..1132 5645 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21123753..21124885 1..1133 5650 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21116853..21117985 1..1133 5650 99.9 Plus
Blast to na_te.dros performed 2019-03-16 14:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2358..2445 633..720 161 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6837 633..698 149 74.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2356..2408 647..699 148 75.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6505..6772 439..699 142 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6848..6954 633..743 139 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6782..6846 633..698 138 69.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2362..2413 647..698 134 73.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6793 633..699 133 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6813 633..698 128 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2359 625..698 117 66.2 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 1254..1316 810..872 116 68.8 Plus
TART-A 13424 TART-A 13424bp 10160..10212 892..946 116 72.7 Plus

IP20624.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:38:21 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21113634..21113894 872..1132 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:04:11 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..348 563..910 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:22:20 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..348 563..910 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:36:47 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..348 563..910 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:33:39 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..348 563..910 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-12 16:24:33 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..348 563..910 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:22:20 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..1132 1..1132 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:36:47 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..1132 1..1132 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:33:39 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..1132 1..1132 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21123753..21124884 1..1132 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21123753..21124884 1..1132 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:38:21 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21123753..21124884 1..1132 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:36:47 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21116853..21117984 1..1132 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:54:04 Download gff for IP20624.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21116853..21117984 1..1132 99   Plus

IP20624.pep Sequence

Translation from 538 to 909

> IP20624.pep
MPGRPEKPMELIKPPRMSAVWFSTGPEVEGGSASRESTNCNININSNISN
KSNKDEKSLASWLHEEISLDCQLGKNLFIFGSNELTERQADKRTSSGPTE
LMGGHSGGRTDNCERFHTKQDDG*

IP20624.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20074-PA 65 GF20074-PA 1..63 17..71 151 55.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16159-PA 96 GG16159-PA 1..94 1..92 452 94.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-PA 115 CG33284-PA 1..115 9..123 612 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22341-PA 139 GM22341-PA 1..96 9..112 364 83.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14934-PA 106 GD14934-PA 1..98 9..110 344 83.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23255-PA 112 GE23255-PA 1..104 1..110 353 75.9 Plus
Dyak\GE19728-PA 96 GE19728-PA 1..94 1..92 349 86.2 Plus

IP20624.hyp Sequence

Translation from 538 to 909

> IP20624.hyp
MPGRPEKPMELIKPPRMSAVWFSTGPEVEGGSASRESTNCNININSNISN
KSNKDEKSLASWLHEEISLDCQLGKNLFIFGSNELTERQADKRTSSGPTE
LMGGHSGGRTDNCERFHTKQDDG*

IP20624.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-PA 115 CG33284-PA 1..115 9..123 612 100 Plus