Clone IP20667 Report

Search the DGRC for IP20667

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:206
Well:67
Vector:pOT2
Associated Gene/TranscriptCG43861-RA
Protein status:IP20667.pep: gold
Sequenced Size:2041

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13966 2008-05-05 Release 5.5 slip selected

Clone Sequence Records

IP20667.complete Sequence

2041 bp assembled on 2009-03-11

GenBank Submission: BT072841.1

> IP20667.complete
GCCAGACAGCCAACGAGCCAACCAGCCATCCAGCTGCATCGAATATATCT
CGGCCAAATGTACGCCGGTCGGGCGACACAATTTGCCAAAACCATCAGCA
GCATGGCGTGCAGCATACAGAAGCAACCTCAAGCTCCGCAATCAGTGGAT
CCTGGCACTGCAGCAGTGGATCGGGTGGGTGGAGGAGGCGGTGGCCCCAG
TGGAGCTGGCACCGTTCCCTCCACGCCGAAAGCCAAGACCGCCCAGCCGA
GGGGCTCCCTGCCAACGGACGTGAACCAGCCACCGTTGGAATTTCAGTGG
CCACCGCCCGTTCCCGTTTCGATACACACGAGCAACTTGCGTCTGAACAT
GATGAACCAGGATCCCAAGGACCTCCACACAGCCAGAGCCATTATCGAGG
AGCTGCGCTCCAAGGTGCGCTTCCAGACGGAGCACATCATGAAGTGGCGC
AAAGCGTATGCCATGCAGGTCCAGCAACACTATCGTTACCAGAAGGAGAA
ATCTGATCAGATGAACTCGTTGACCTCGCAGCTCTTGCTCTTGGAATCCC
GACTGAAGCGGAAGCAGAAGCAGATAGCCAGTCTATTGAACCATCGGGAG
TTGACCATCCAGCGCCAGCAGAAGATCATCGACACCCTGTCCTCCCGGCT
GGTGGATCACGGGCTGGAGACCATTGAAGCTAGCTATGCCAACGAGCTGG
ACTCCCTGAACGACTCGGATTCGGCGGTGGTGCTGGAGGACATTGACTCG
GACAGCCCGATGACATTGGGCACGCGACGGAAGAGTAGTGGCGCTGGCGG
ATTGGGCGGCGTGCTGGGCAGCGATGGCATCACCATAGTGCGGTCCATAT
CCGATGCAATCGAGACGAATCACAACAAGTACGGAGCGGCCAGGCGGAAC
AACTGCTTCCTGCGGCGTCCCGATATCCTGGAAACGGTATATTCGGTCGA
GGAGGATCCCGAACCCACCACGGACGTGGCAGAGAAGCGGGACAAGTTCA
AGAACCGCTCCGACAAGGCTCTCAGCTCCAGCTCGACGGAGGGTCAGATA
GACGCCGCCAGTCCCTCGACCGCAGACAAAGCCAAAGATTCATCGCCCGT
CGACGGCGGATCCACCATTCCAAGACGCCAACTGGGAGCCCTCAAAAGAT
CTCCCAGCCACGACTCTCCGTGCACCACACTCAGTGTCAAGGTCCCCCAG
CTGCAGCCACCATCTCCTACACCATCGACACAAGGAGTCCAGGATCCGCC
CAACGGAAAAACCCAGGTCACCAACTACAACCGGGTTATGCTCAACCATC
GCTCGGTGACGAAGCCCAAGGACGTCAAGTACAAGCGCATCAACAAGGCG
AAGTCCAAGAGTCTGGAGGAGCTGCGAGGGCGCCTCAAGAACCTGGTGGA
GCGGCCTCCTGGCCTGGACGGCGGCTACTCCGGCGGCATGATGCCGCAGG
CGGCGCAGTCATATGCGTGACATTCGCAGCAGCCGGACGGAGAGTCCCAG
AGGTCAACGGAGGGGGTAAAGAACGGCCAGCCGGAGGCGGCGATGGAACC
TCGTCCGCGGAGGGAGAGCGCGGAGCCAATGACCTCGACCTCGGCCGCGA
CCTCGACCTCGACTTCGATCTCCGCCACCCAGGAGCCGCAGGGCAGCAGA
CATGGCTTTCCCAAGAGGTCGCTGACCTTGCCACGCATCCTGGTGCCCCG
GCAATCGGCAGCGGGACTGGCGGGCTCGAGCGGCGGCGGCGGTGGTGGGC
GTGGCGGCTTCTAGCAATTAAAGAAATTTTTCATACGCAATTGTGATAAA
AAGTAAACACGTTTTCTTCCTCCGTCTCTGTAGTGCCGACTTCAGTTGCT
TTAACATGATTCTCTTTTGTAACATTTGTTTCCTTGACATTTATCCTGCG
CCTAGTTTGGTAAACTATGCATTTACTTAAGTTATAGCTTAAGTTTTTCA
TAAAACGGAACTGCATTTTGACTTAACATTACATATAGTTTCTCACAAAA
CAAATAAATCATTTTAAAAACATAAAAAAAAAAAAAAAAAA

IP20667.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13966-RA 2023 CG13966-RA 1..2023 1..2023 10115 100 Plus
CG13966-RB 2911 CG13966-RB 668..1934 1..1267 6335 100 Plus
CG13966-RB 2911 CG13966-RB 2151..2911 1263..2023 3805 100 Plus
CG12508-RA 222 CG12508-RA 1..222 1543..1764 1110 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:51:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19968868..19969670 1268..466 4015 100 Minus
chr2L 23010047 chr2L 19967836..19968594 2021..1263 3780 99.9 Minus
chr2L 23010047 chr2L 19969754..19970223 470..1 2350 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19970518..19971320 1268..466 4015 100 Minus
2L 23513712 2L 19969483..19970244 2024..1263 3810 100 Minus
2L 23513712 2L 19971404..19971873 470..1 2350 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19970518..19971320 1268..466 4015 100 Minus
2L 23513712 2L 19969483..19970244 2024..1263 3810 100 Minus
2L 23513712 2L 19971404..19971873 470..1 2350 100 Minus
Blast to na_te.dros performed 2019-03-15 20:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
G4 3856 G4 G4_DM 3856bp 94..153 1884..1827 115 68.3 Minus

IP20667.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:52:25 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19967834..19968590 1267..2023 99 <- Minus
chr2L 19968870..19969667 469..1266 100 <- Minus
chr2L 19969756..19970223 1..468 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:52:34 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..1413 58..1470 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:40:16 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..1413 58..1470 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:27:03 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RC 1..1707 58..1764 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:33:43 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RC 1..1707 58..1764 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-11 16:37:57 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..1413 58..1470 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:40:16 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..2023 1..2023 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:27:03 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RA 664..2686 1..2023 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:33:43 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RA 664..2686 1..2023 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:25 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19969484..19970240 1267..2023 100 <- Minus
2L 19970520..19971317 469..1266 100 <- Minus
2L 19971406..19971873 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:25 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19969484..19970240 1267..2023 100 <- Minus
2L 19970520..19971317 469..1266 100 <- Minus
2L 19971406..19971873 1..468 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:52:25 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19969484..19970240 1267..2023 100 <- Minus
2L 19970520..19971317 469..1266 100 <- Minus
2L 19971406..19971873 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:27:03 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19969484..19970240 1267..2023 100 <- Minus
arm_2L 19970520..19971317 469..1266 100 <- Minus
arm_2L 19971406..19971873 1..468 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:14:32 Download gff for IP20667.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19969484..19970240 1267..2023 100 <- Minus
2L 19970520..19971317 469..1266 100 <- Minus
2L 19971406..19971873 1..468 100   Minus

IP20667.hyp Sequence

Translation from 0 to 1469

> IP20667.hyp
ARQPTSQPAIQLHRIYLGQMYAGRATQFAKTISSMACSIQKQPQAPQSVD
PGTAAVDRVGGGGGGPSGAGTVPSTPKAKTAQPRGSLPTDVNQPPLEFQW
PPPVPVSIHTSNLRLNMMNQDPKDLHTARAIIEELRSKVRFQTEHIMKWR
KAYAMQVQQHYRYQKEKSDQMNSLTSQLLLLESRLKRKQKQIASLLNHRE
LTIQRQQKIIDTLSSRLVDHGLETIEASYANELDSLNDSDSAVVLEDIDS
DSPMTLGTRRKSSGAGGLGGVLGSDGITIVRSISDAIETNHNKYGAARRN
NCFLRRPDILETVYSVEEDPEPTTDVAEKRDKFKNRSDKALSSSSTEGQI
DAASPSTADKAKDSSPVDGGSTIPRRQLGALKRSPSHDSPCTTLSVKVPQ
LQPPSPTPSTQGVQDPPNGKTQVTNYNRVMLNHRSVTKPKDVKYKRINKA
KSKSLEELRGRLKNLVERPPGLDGGYSGGMMPQAAQSYA*

IP20667.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG43861-PD 470 CG43861-PD 1..470 20..489 2413 100 Plus
CG43861-PC 568 CG43861-PC 1..470 20..489 2413 100 Plus
CG43861-PA 470 CG43861-PA 1..470 20..489 2413 100 Plus
CG43861-PB 422 CG43861-PB 1..403 20..422 2067 100 Plus

IP20667.pep Sequence

Translation from 0 to 1469

> IP20667.pep
ARQPTSQPAIQLHRIYLGQMYAGRATQFAKTISSMACSIQKQPQAPQSVD
PGTAAVDRVGGGGGGPSGAGTVPSTPKAKTAQPRGSLPTDVNQPPLEFQW
PPPVPVSIHTSNLRLNMMNQDPKDLHTARAIIEELRSKVRFQTEHIMKWR
KAYAMQVQQHYRYQKEKSDQMNSLTSQLLLLESRLKRKQKQIASLLNHRE
LTIQRQQKIIDTLSSRLVDHGLETIEASYANELDSLNDSDSAVVLEDIDS
DSPMTLGTRRKSSGAGGLGGVLGSDGITIVRSISDAIETNHNKYGAARRN
NCFLRRPDILETVYSVEEDPEPTTDVAEKRDKFKNRSDKALSSSSTEGQI
DAASPSTADKAKDSSPVDGGSTIPRRQLGALKRSPSHDSPCTTLSVKVPQ
LQPPSPTPSTQGVQDPPNGKTQVTNYNRVMLNHRSVTKPKDVKYKRINKA
KSKSLEELRGRLKNLVERPPGLDGGYSGGMMPQAAQSYA*

IP20667.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15465-PA 534 GF15465-PA 1..448 35..465 1902 85.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21597-PA 474 GG21597-PA 1..474 20..489 2427 96.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13033-PA 475 GH13033-PA 1..475 20..489 1838 79.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG43861-PD 470 CG43861-PD 1..470 20..489 2413 100 Plus
CG43861-PC 568 CG43861-PC 1..470 20..489 2413 100 Plus
CG43861-PA 470 CG43861-PA 1..470 20..489 2413 100 Plus
CG43861-PB 422 CG43861-PB 1..403 20..422 2067 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18183-PA 483 GI18183-PA 1..483 20..489 1900 80.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26682-PA 477 GL26682-PA 1..477 20..489 1891 81.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12664-PA 511 GA12664-PA 92..511 71..489 1824 86.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16972-PA 470 GM16972-PA 1..470 20..489 2472 99.1 Plus
Dsec\GM17406-PA 322 GM17406-PA 1..317 117..433 1619 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21722-PA 470 GD21722-PA 1..470 20..489 2466 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14646-PA 472 GJ14646-PA 1..472 20..489 1898 83.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15206-PA 488 GK15206-PA 1..488 20..489 1891 80.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12615-PA 475 GE12615-PA 1..475 20..489 2417 96.4 Plus