Clone IP20764 Report

Search the DGRC for IP20764

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:207
Well:64
Vector:pOT2
Associated Gene/TranscriptDpy-30L1-RA
Protein status:IP20764.pep: gold
Sequenced Size:578

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6444 2008-05-05 Release 5.5 slip selected
CG6444 2008-08-15 Release 5.9 accounting
CG6444 2008-12-18 5.12 accounting

Clone Sequence Records

IP20764.complete Sequence

578 bp assembled on 2008-12-16

GenBank Submission: BT032766.1

> IP20764.complete
AATTTGTTGGACTGCTGCAAAGACGCCAAGTGAAAACCGAGATTTGCTGA
ACAAAAGGAACACATTGCCATGGAGGCCAAGACCGACGCACCCATCTCAC
CAGCGCCCACAACAAATCCGCCGGCAGAAGCTGGCAAGGAGCCAAATGCA
AGCAGCAATGCGCAAGCAAACCCGACCGCTGCGCCGGGAGCTCCTCCATC
CGGAGCCATTGCCGTTGGCCAGTCCACAAATCCAGTGGCGCAGCAGCAAC
AGCAGCCGGCGGTGGCCAAGAAGCCCAGTAGCGAGACAAACAACATGCCC
ACGCGACAGTACCTCGACCAGACGGTGGCGCCGGTTCTGCTCCACGGAAT
GCAGGCCCTGGCTCGCGAACGGCCCACGGATCCCATACAGTTCCTGGCCT
CCTACCTACTAAAGCATAGCAACGGGTGCGACGAGAACAACGCCTCCGCC
GCCGCCGTGGACAACAACTCCTAAGCCCTCCATCCTACCTACCTCCCATT
TGTCCCCCTCCTTAGTTGTATAATTGAACAGTGAATAAATAATAAACGTT
TAAAGTTAGAAAAAAAAAAAAAAAAAAA

IP20764.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-RA 559 Dpy-30L1-RA 1..559 1..559 2795 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10731513..10732071 1..559 2750 99.5 Plus
chr3L 24539361 chr3L 4046581..4046688 414..307 180 77.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10732749..10733309 1..561 2805 100 Plus
3L 28110227 3L 4047195..4047302 414..307 180 77.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10732749..10733309 1..561 2805 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:09:35 has no hits.

IP20764.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:10:13 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10731513..10732071 1..559 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:22:41 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
CG6444-RA 1..405 70..474 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:45:07 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 1..405 70..474 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:16:30 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 1..405 70..474 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:56:59 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
CG6444-RA 1..405 70..474 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:27:48 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 1..405 70..474 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-16 10:22:13 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
CG6444-RA 2..511 1..510 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:45:07 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 1..559 1..559 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:16:30 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 97..655 1..559 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:56:59 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
CG6444-RA 2..511 1..510 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:27:48 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 97..655 1..559 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:13 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732749..10733307 1..559 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:13 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732749..10733307 1..559 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:13 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732749..10733307 1..559 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:16:30 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10732749..10733307 1..559 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:30:48 Download gff for IP20764.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732749..10733307 1..559 100   Plus

IP20764.hyp Sequence

Translation from 0 to 411

> IP20764.hyp
ICWTAAKTPSENRDLLNKRNTLPWRPRPTHPSHQRPQQIRRQKLARSQMQ
AAMRKQTRPLRRELLHPEPLPLASPQIQWRSSNSSRRWPRSPVARQTTCP
RDSTSTRRWRRFCSTECRPWLANGPRIPYSSWPPTY*
Sequence IP20764.hyp has no blast hits.

IP20764.pep Sequence

Translation from 69 to 473

> IP20764.pep
MEAKTDAPISPAPTTNPPAEAGKEPNASSNAQANPTAAPGAPPSGAIAVG
QSTNPVAQQQQQPAVAKKPSSETNNMPTRQYLDQTVAPVLLHGMQALARE
RPTDPIQFLASYLLKHSNGCDENNASAAAVDNNS*

IP20764.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15823-PA 120 GF15823-PA 1..120 1..134 314 58.2 Plus
Dana\GF24410-PA 99 GF24410-PA 35..95 64..124 220 60.7 Plus
Dana\GF24185-PA 117 GF24185-PA 67..109 79..121 139 53.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23672-PA 132 GG23672-PA 1..132 1..134 609 92.5 Plus
Dere\GG14226-PA 98 GG14226-PA 34..92 64..122 230 66.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:24:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10427-PA 167 GH10427-PA 73..167 47..130 276 62.1 Plus
Dgri\GH17006-PA 87 GH17006-PA 25..86 64..125 184 51.6 Plus
Dgri\GH10119-PA 87 GH10119-PA 26..86 65..125 180 50.8 Plus
Dgri\GH15880-PA 121 GH15880-PA 17..113 27..121 146 34.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-PA 134 CG6444-PA 1..134 1..134 691 100 Plus
Dpy-30L2-PB 98 CG11591-PB 34..92 64..122 226 67.8 Plus
Dpy-30L2-PA 98 CG11591-PA 34..92 64..122 226 67.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23495-PA 158 GI23495-PA 83..150 61..122 263 75 Plus
Dmoj\GI11421-PA 91 GI11421-PA 28..90 65..127 236 61.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26631-PA 123 GL26631-PA 1..115 1..123 346 63.3 Plus
Dper\GL16811-PA 122 GL16811-PA 60..118 66..124 216 59.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19598-PA 123 GA19598-PA 1..115 1..123 341 62.5 Plus
Dpse\GA11085-PA 122 GA11085-PA 60..118 66..124 215 59.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18725-PA 133 GM18725-PA 1..133 1..134 452 90.4 Plus
Dsec\GM14020-PA 98 GM14020-PA 34..92 64..122 233 66.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23729-PA 134 GD23729-PA 1..134 1..134 492 90.4 Plus
Dsim\GD13299-PA 98 GD13299-PA 34..92 64..122 232 66.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20701-PA 159 GJ20701-PA 98..151 69..122 258 83.3 Plus
Dvir\GJ13617-PA 91 GJ13617-PA 28..90 65..127 236 63.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15480-PA 147 GK15480-PA 1..110 1..123 274 52.8 Plus
Dwil\GK18024-PA 109 GK18024-PA 45..106 64..125 231 59.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18485-PA 132 GE18485-PA 1..132 1..134 611 92.5 Plus
Dyak\GE20654-PA 98 GE20654-PA 34..92 64..122 234 67.8 Plus