Clone IP20767 Report

Search the DGRC for IP20767

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:207
Well:67
Vector:pOT2
Associated Gene/TranscriptCG43861-RB
Protein status:IP20767.pep: gold
Sequenced Size:2926

Clone Sequence Records

IP20767.complete Sequence

2926 bp assembled on 2009-03-09

GenBank Submission: BT072820.1

> IP20767.complete
TTTCAACGCGTTCGGCTGCCGACCCGCTCGATTTTTGAATTCATTTTTTG
GCCAGGCCCACTGAAAAAAAAAAGAGAAAAAACCAATCGAAAACAAAGCC
TCATTGCGCCCCATTAGGCAAATGCTAAATTAGTCCGTTGTGTAAAGGTG
TAAAGCATTATTTTGTCGAAATTCGCCTGCCGCAACAAACCCCATTTGCT
TGTGTTGGTTTAAGCCCAATTGTTTGGCCAAAGTACCGCGGAGTTTTGTA
AAAATATTTCTGGAAAATCTTCCCCAAAGTGCAGTGATTGTGTTTGTGTG
CTCGTATCGTTTGTAGAACGGTAACAGGTAAAACAACATCAACAATCCGA
GTCCGAACGAGCGGCCGATGTCGGTGAATATAACCATTAAAATGAAGTTA
AAGTCGCTCCCGAGCTGCATACAAATGCTGCTGTAAATAAGTCTAAACAA
ACACTTGCATTTGTTGATGACAGCGTGGAAAAAGCTTTCAAGAACTGGAG
GACTCCCAATCCCTTGGCCTGGACTAACCGAAAGTAAATTGAAATTTCAG
CACGTTCTCGGCTCCGGACCAGTGCACATCCATTTTTGCATGCTGGCCGG
GCAGATAGCCCCGGCGTGAGCACACACATCGGGCTGGAAAAGATATAGCC
ATCGAGTCAGCCAGCCAGACAGCCAACGAGCCAACCAGCCATCCAGCTGC
ATCGAATATATCTCGGCCAAATGTACGCCGGTCGGGCGACACAATTTGCC
AAAACCATCAGCAGCATGGCGTGCAGCATACAGAAGCAACCTCAAGCTCC
GCAATCAGTGGATCCTGGCACTGCAGCAGTGGATCGGGTGGGTGGAGGAG
GCGGTGGCCCCAGTGGAGCTGGCACCGTTCCCTCCACGCCGAAAGCCAAG
ACCGCCCAGCCGAGGGGCTCCCTGCCAACGGACGTGAACCAGCCACCGTT
GGAATTTCAGTGGCCACCGCCCGTTCCCGTTTCGATACACACGAGCAACT
TGCGTCTGAACATGATGAACCAGGATCCCAAGGACCTCCACACAGCCAGA
GCCATTATCGAGGAGCTGCGCTCCAAGGTGCGCTTCCAGACGGAGCACAT
CATGAAGTGGCGCAAAGCGTATGCCATGCAGGTCCAGCAACACTATCGTT
ACCAGAAGGAGAAATCTGATCAGATGAACTCGTTGACCTCGCAGCTCTTG
CTCTTGGAATCCCGACTGAAGCGGAAGCAGAAGCAGATAGCCAGTCTATT
GAACCATCGGGAGTTGACCATCCAGCGCCAGCAGAAGATCATCGACACCC
TGTCCTCCCGGCTGGTGGATCACGGGCTGGAGACCATTGAAGCTAGCTAT
GCCAACGAGCTGGACTCCCTGAACGACTCGGATTCGGCGGTGGTGCTGGA
GGACATTGACTCGGACAGCCCGATGACATTGGGCACGCGACGGAAGAGTA
GTGGCGCTGGCGGATTGGGCGGCGTGCTGGGCAGCGATGGCATCACCATA
GTGCGGTCCATATCCGATGCAATCGAGACGAATCACAACAAGTACGGAGC
GGCCAGGCGGAACAACTGCTTCCTGCGGCGTCCCGATATCCTGGAAACGG
TATATTCGGTCGAGGAGGATCCCGAACCCACCACGGACGTGGCAGAGAAG
CGGGACAAGTTCAAGAACCGCTCCGACAAGGCTCTCAGCTCCAGCTCGAC
GGAGGGTCAGATAGACGCCGCCAGTCCCTCGACCGCAGACAAAGCCAAAG
ATTCATCGCCCGTCGACGGCGGATCCACCATTCCAAGACGCCAACTGGGA
GCCCTCAAAAGATCTCCCAGCCACGACTCTCCGTGCACCACACTCAGTGT
CAAGGTCCCCCAGCTGCAGCCACCATCTCCTACACCATCGACACAAGGAG
TCCAGGATCCGCCCAACGGAAAAACCCAGGATAATGTTGAGCCAATGGAG
GGAATTCCCATATTCTTAGATTGCGAAATAGACTTATAGCGTTTATTAAA
TTATGAAACTTTACTAGAGAAAAGACTTTCTGTTTTCCTGCATAGCACTA
AATCTTTGAATTAAATGTATTAAACGAATCTTTGGCTTTTCCAATGAAGC
ATAGATCTTTCTATCTTATATGCATAGTTAATGTATATATCCTTTTCCAG
GTCACCAACTACAACCGGGTTATGCTCAACCATCGCTCGGTGACGAAGCC
CAAGGACGTCAAGTACAAGCGCATCAACAAGGCGAAGTCCAAGAGTCTGG
AGGAGCTGCGAGGGCGCCTCAAGAACCTGGTGGAGCGGCCTCCTGGCCTG
GACGGCGGCTACTCCGGCGGCATGATGCCGCAGGCGGCGCAGTCATATGC
GTGACATTCGCAGCAGCCGGACGGAGAGTCCCAGAGGTCAACGGAGGGGG
TAAAGAACGGCCAGCCGGAGGCGGCGATGGAACCTCGTCCGCGGAGGGAG
AGCGCGGAGCCAATGACCTCGACCTCGGCCGCGACCTCGACCTCGACTTC
GATCTCCGCCACCCAGGAGCCGCAGGGCAGCAGACATGGCTTTCCCAAGA
GGTCGCTGACCTTGCCACGCATCCTGGTGCCCCGGCAATCGGCAGCGGGA
CTGGCGGGCTCGAGCGGCGGCGGCGGTGGTGGGCGTGGCGGCTTCTAGCA
ATTAAAGAAATTTTTCATACGCAATTGTGATAAAAAGTAAACACGTTTTC
TTCCTCCGTCTCTGTAGTGCCGACTTCAGTTGCTTTAACATGATTCTCTT
TTGTAACATTTGTTTCCTTGACATTTATCCTGCGCCTAGTTTGGTAAACT
ATGCATTTACTTAAGTTATAGCTTAAGTTTTTCATAAAACGGAACTGCAT
TTTGACTTAACATTACATATAGTTTCTCACAAAACAAATAAATCATTTTA
AAAACATAAAAAAAAAAAAAAAAAAA

IP20767.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:25:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13966-RB 2911 CG13966-RB 5..2911 1..2907 14535 100 Plus
CG13966-RA 2023 CG13966-RA 1..1267 664..1930 6335 100 Plus
CG13966-RA 2023 CG13966-RA 1263..2023 2147..2907 3805 100 Plus
CG12508-RA 222 CG12508-RA 1..222 2427..2648 1110 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19967836..19968814 2905..1927 4865 99.8 Minus
chr2L 23010047 chr2L 19968869..19969670 1930..1129 4010 100 Minus
chr2L 23010047 chr2L 19969754..19970340 1133..547 2935 100 Minus
chr2L 23010047 chr2L 20015184..20015650 467..1 2290 99.4 Minus
chr2L 23010047 chr2L 19980917..19980964 546..499 240 100 Minus
chr2L 23010047 chr2L 19997696..19997734 501..463 195 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:52:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19969483..19970464 2908..1927 4910 100 Minus
2L 23513712 2L 19970519..19971320 1930..1129 4010 100 Minus
2L 23513712 2L 19971404..19971990 1133..547 2935 100 Minus
2L 23513712 2L 20016816..20017282 467..1 2320 99.8 Minus
2L 23513712 2L 19982567..19982614 546..499 240 100 Minus
2L 23513712 2L 19999336..19999374 501..463 195 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19969483..19970464 2908..1927 4910 100 Minus
2L 23513712 2L 19970519..19971320 1930..1129 4010 100 Minus
2L 23513712 2L 19971404..19971990 1133..547 2935 100 Minus
2L 23513712 2L 20016816..20017282 467..1 2320 99.7 Minus
2L 23513712 2L 19982567..19982614 546..499 240 100 Minus
2L 23513712 2L 19999336..19999374 501..463 195 100 Minus
Blast to na_te.dros performed on 2019-03-15 23:52:58 has no hits.

IP20767.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:53:44 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19967834..19968811 1930..2907 99 <- Minus
chr2L 19968870..19969667 1132..1929 100 <- Minus
chr2L 19969756..19970189 698..1131 100 == Minus
chr2L 19970241..19970340 547..646 100 <- Minus
chr2L 19980917..19980962 501..546 100 <- Minus
chr2L 19997697..19997733 464..500 100 <- Minus
chr2L 20015188..20015650 1..463 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:32:11 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..1210 721..1930 100 == Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:38:58 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RB 1..1269 721..1989 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:31:55 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RB 1..1269 721..1989 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:50:43 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RB 1..1269 721..1989 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:32:10 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RA 1..1210 721..1930 100 == Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:38:58 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG13966-RB 1..2907 1..2907 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:31:55 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RB 1..2907 1..2907 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:50:43 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
CG43861-RB 1..2907 1..2907 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:44 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20016820..20017282 1..463 100   Minus
2L 19969484..19970461 1930..2907 100 <- Minus
2L 19970520..19971317 1132..1929 100 <- Minus
2L 19971406..19971990 547..1131 100 <- Minus
2L 19982567..19982612 501..546 100 <- Minus
2L 19999337..19999373 464..500 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:44 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20016820..20017282 1..463 100   Minus
2L 19969484..19970461 1930..2907 100 <- Minus
2L 19970520..19971317 1132..1929 100 <- Minus
2L 19971406..19971990 547..1131 100 <- Minus
2L 19982567..19982612 501..546 100 <- Minus
2L 19999337..19999373 464..500 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:53:44 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20016820..20017282 1..463 100   Minus
2L 19969484..19970461 1930..2907 100 <- Minus
2L 19970520..19971317 1132..1929 100 <- Minus
2L 19971406..19971990 547..1131 100 <- Minus
2L 19982567..19982612 501..546 100 <- Minus
2L 19999337..19999373 464..500 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:31:55 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19969484..19970461 1930..2907 100 <- Minus
arm_2L 19970520..19971317 1132..1929 100 <- Minus
arm_2L 19971406..19971990 547..1131 100 <- Minus
arm_2L 19982567..19982612 501..546 100 <- Minus
arm_2L 19999337..19999373 464..500 100 <- Minus
arm_2L 20016820..20017282 1..463 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:12:57 Download gff for IP20767.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19969484..19970461 1930..2907 100 <- Minus
2L 19970520..19971317 1132..1929 100 <- Minus
2L 19971406..19971990 547..1131 100 <- Minus
2L 19982567..19982612 501..546 100 <- Minus
2L 19999337..19999373 464..500 100 <- Minus
2L 20016820..20017282 1..463 100   Minus

IP20767.pep Sequence

Translation from 720 to 1988

> IP20767.pep
MYAGRATQFAKTISSMACSIQKQPQAPQSVDPGTAAVDRVGGGGGGPSGA
GTVPSTPKAKTAQPRGSLPTDVNQPPLEFQWPPPVPVSIHTSNLRLNMMN
QDPKDLHTARAIIEELRSKVRFQTEHIMKWRKAYAMQVQQHYRYQKEKSD
QMNSLTSQLLLLESRLKRKQKQIASLLNHRELTIQRQQKIIDTLSSRLVD
HGLETIEASYANELDSLNDSDSAVVLEDIDSDSPMTLGTRRKSSGAGGLG
GVLGSDGITIVRSISDAIETNHNKYGAARRNNCFLRRPDILETVYSVEED
PEPTTDVAEKRDKFKNRSDKALSSSSTEGQIDAASPSTADKAKDSSPVDG
GSTIPRRQLGALKRSPSHDSPCTTLSVKVPQLQPPSPTPSTQGVQDPPNG
KTQDNVEPMEGIPIFLDCEIDL*

IP20767.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15465-PA 534 GF15465-PA 1..405 16..403 1680 84.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21597-PA 474 GG21597-PA 1..407 1..403 2070 96.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13033-PA 475 GH13033-PA 1..409 1..403 1530 78.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43861-PB 422 CG43861-PB 1..422 1..422 2170 100 Plus
CG43861-PD 470 CG43861-PD 1..403 1..403 2067 100 Plus
CG43861-PC 568 CG43861-PC 1..403 1..403 2067 100 Plus
CG43861-PA 470 CG43861-PA 1..403 1..403 2067 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18183-PA 483 GI18183-PA 1..384 1..379 1591 83.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26682-PA 477 GL26682-PA 1..410 1..403 1560 80.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12664-PA 511 GA12664-PA 92..444 52..403 1493 85.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:00:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16972-PA 470 GM16972-PA 1..403 1..403 2119 99.3 Plus
Dsec\GM17406-PA 322 GM17406-PA 1..306 98..403 1608 99.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:00:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21722-PA 470 GD21722-PA 1..403 1..403 2103 98.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14646-PA 472 GJ14646-PA 1..406 1..403 1583 82.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15206-PA 488 GK15206-PA 1..421 1..397 1565 80.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:00:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12615-PA 475 GE12615-PA 1..408 1..403 2065 96.3 Plus

IP20767.hyp Sequence

Translation from 720 to 1988

> IP20767.hyp
MYAGRATQFAKTISSMACSIQKQPQAPQSVDPGTAAVDRVGGGGGGPSGA
GTVPSTPKAKTAQPRGSLPTDVNQPPLEFQWPPPVPVSIHTSNLRLNMMN
QDPKDLHTARAIIEELRSKVRFQTEHIMKWRKAYAMQVQQHYRYQKEKSD
QMNSLTSQLLLLESRLKRKQKQIASLLNHRELTIQRQQKIIDTLSSRLVD
HGLETIEASYANELDSLNDSDSAVVLEDIDSDSPMTLGTRRKSSGAGGLG
GVLGSDGITIVRSISDAIETNHNKYGAARRNNCFLRRPDILETVYSVEED
PEPTTDVAEKRDKFKNRSDKALSSSSTEGQIDAASPSTADKAKDSSPVDG
GSTIPRRQLGALKRSPSHDSPCTTLSVKVPQLQPPSPTPSTQGVQDPPNG
KTQDNVEPMEGIPIFLDCEIDL*

IP20767.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:14:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG43861-PB 422 CG43861-PB 1..422 1..422 2170 100 Plus
CG43861-PD 470 CG43861-PD 1..403 1..403 2067 100 Plus
CG43861-PA 470 CG43861-PA 1..403 1..403 2067 100 Plus
CG43861-PC 568 CG43861-PC 1..403 1..403 2067 100 Plus