IP20801.complete Sequence
867 bp assembled on 2008-05-27
GenBank Submission: BT032767
> IP20801.complete
CTTTGACTTGATCGAATCACTTATTTATATATTCTCTCTGAGATCTTTAT
AAATTTCGAAAATTTTCTTTGTACAAACTTACCTCATTTCGCAATGTATT
TCTTCGAGAAGATCAGTGATCAGTTTTGCCGCGTTGTGCGCACCAACCTA
AATATACCACTATCCTTTTGCGAAACACGGAACGTCTGGAAATTCTCGAA
CACTTCCGATACAATGATATTCTTCTTCACCCTCACCTTTGGTATCCTTC
GAGCGTTCTCAAATTTTATAGATTTCATGAACCTTTTCTTCGGAGGGATG
CGTTTGGGGCGGCCAAGCAATCTCTTGATTTTGAGGGGCGAAAATTCGCG
CCGCTTTCAAGTCATCAAACACTTTTTAATGCTGAATGCATGGATATTAG
TGATATACGCCATGGTATTTATCAAGCCGCATTACATGGTTCCCTTCGTT
GTGCTTTCGTTGATCATCTTGATCATCTATGTGTTCGTCGTGGCATTAGA
TATCCTGCGACATGTCGGGATACCACTGGACCGCAAGATGATCCTTTCGG
AAATGATCCTCAACTTGAGCTGTGTTGTTTACGTGCAGGGGGTCCTCAAG
CAACAGATCTTCTCTTAGTGGACGAATTTTTTGGTTTTGAAGAAATGCTG
GTTGAATGGATGGTTAATATTGGCATTACGCTGCCAAGCAAAACAGTTAC
TATATTCTATGATTGGCAATTATTACGCCTAAGTTAAGTTATTACGTTCT
TCTTGTTTCGTTGTCAAAAACATATTATAAATACTTACACATTGATGAAA
AATAAAACCATTAACAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
IP20801.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:52:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33252-RA | 880 | CG33252-RA | 49..869 | 1..821 | 4105 | 100 | Plus |
CG32588-RA | 694 | CG32588-RA | 101..295 | 100..294 | 405 | 80.5 | Plus |
CG32588-RA | 694 | CG32588-RA | 297..418 | 311..432 | 220 | 78.6 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 16785845..16786243 | 819..421 | 1980 | 99.7 | Minus |
chrX | 22417052 | chrX | 16786563..16786817 | 255..1 | 1215 | 98.4 | Minus |
chrX | 22417052 | chrX | 16786319..16786484 | 420..255 | 830 | 100 | Minus |
chrX | 22417052 | chrX | 15111064..15111269 | 253..47 | 505 | 84.1 | Minus |
chrX | 22417052 | chrX | 15110819..15110975 | 419..263 | 500 | 87.9 | Minus |
chrX | 22417052 | chrX | 15110536..15110747 | 632..421 | 490 | 82.1 | Minus |
chrX | 22417052 | chrX | 15096505..15096657 | 252..100 | 300 | 79.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:43:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:43:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16896213..16896613 | 821..421 | 2005 | 100 | Minus |
X | 23542271 | X | 16896933..16897187 | 255..1 | 1275 | 100 | Minus |
X | 23542271 | X | 16896689..16896854 | 420..255 | 830 | 100 | Minus |
X | 23542271 | X | 15220939..15221144 | 253..47 | 505 | 84.1 | Minus |
X | 23542271 | X | 15220694..15220850 | 419..263 | 500 | 87.9 | Minus |
X | 23542271 | X | 15220411..15220622 | 632..421 | 475 | 81.6 | Minus |
X | 23542271 | X | 15206397..15206549 | 252..100 | 300 | 79.7 | Minus |
X | 23542271 | X | 15206169..15206278 | 420..311 | 190 | 78.2 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 16904311..16904711 | 821..421 | 2005 | 100 | Minus |
X | 23527363 | X | 16905031..16905285 | 255..1 | 1275 | 100 | Minus |
X | 23527363 | X | 16904787..16904952 | 420..255 | 830 | 100 | Minus |
X | 23527363 | X | 15228792..15228948 | 419..263 | 500 | 87.8 | Minus |
X | 23527363 | X | 15228509..15228720 | 632..421 | 475 | 81.6 | Minus |
X | 23527363 | X | 15229111..15229242 | 179..47 | 370 | 86.4 | Minus |
X | 23527363 | X | 15214495..15214647 | 252..100 | 300 | 79.7 | Minus |
X | 23527363 | X | 15229037..15229104 | 253..186 | 205 | 86.7 | Minus |
X | 23527363 | X | 15214267..15214376 | 420..311 | 190 | 78.1 | Minus |
X | 23527363 | X | 15214378..15214411 | 294..261 | 140 | 94.1 | Minus |
Blast to na_te.dros performed on 2019-03-16 16:43:56 has no hits.
IP20801.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:45:08 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 16786563..16786817 | 1..255 | 98 | | Minus |
chrX | 16785845..16786243 | 421..819 | 99 | <- | Minus |
chrX | 16786319..16786483 | 256..420 | 100 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:22:44 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..525 | 94..618 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:39:55 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..525 | 94..618 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:42:58 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..525 | 94..618 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:46:06 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..525 | 94..618 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:39:18 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..525 | 94..618 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:09:37 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..625 | 14..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:39:55 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..625 | 14..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:42:58 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..819 | 1..819 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:46:06 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..625 | 14..638 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:39:18 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33252-RA | 1..819 | 1..819 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:08 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16896215..16896613 | 421..819 | 100 | <- | Minus |
X | 16896689..16896853 | 256..420 | 100 | <- | Minus |
X | 16896933..16897187 | 1..255 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:08 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16896215..16896613 | 421..819 | 100 | <- | Minus |
X | 16896689..16896853 | 256..420 | 100 | <- | Minus |
X | 16896933..16897187 | 1..255 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:08 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16896215..16896613 | 421..819 | 100 | <- | Minus |
X | 16896689..16896853 | 256..420 | 100 | <- | Minus |
X | 16896933..16897187 | 1..255 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:42:58 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16790966..16791220 | 1..255 | 100 | | Minus |
arm_X | 16790248..16790646 | 421..819 | 100 | <- | Minus |
arm_X | 16790722..16790886 | 256..420 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:00 Download gff for
IP20801.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16904313..16904711 | 421..819 | 100 | <- | Minus |
X | 16904787..16904951 | 256..420 | 100 | <- | Minus |
X | 16905031..16905285 | 1..255 | 100 | | Minus |
IP20801.hyp Sequence
Translation from 93 to 617
> IP20801.hyp
MYFFEKISDQFCRVVRTNLNIPLSFCETRNVWKFSNTSDTMIFFFTLTFG
ILRAFSNFIDFMNLFFGGMRLGRPSNLLILRGENSRRFQVIKHFLMLNAW
ILVIYAMVFIKPHYMVPFVVLSLIILIIYVFVVALDILRHVGIPLDRKMI
LSEMILNLSCVVYVQGVLKQQIFS*
IP20801.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:14:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33252-PA | 174 | CG33252-PA | 1..174 | 1..174 | 892 | 100 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..172 | 1..172 | 633 | 71.5 | Plus |
CG32588-PA | 170 | CG32588-PA | 1..169 | 1..173 | 420 | 52.3 | Plus |
CG9030-PB | 210 | CG9030-PB | 1..192 | 1..172 | 212 | 28.4 | Plus |
IP20801.pep Sequence
Translation from 93 to 617
> IP20801.pep
MYFFEKISDQFCRVVRTNLNIPLSFCETRNVWKFSNTSDTMIFFFTLTFG
ILRAFSNFIDFMNLFFGGMRLGRPSNLLILRGENSRRFQVIKHFLMLNAW
ILVIYAMVFIKPHYMVPFVVLSLIILIIYVFVVALDILRHVGIPLDRKMI
LSEMILNLSCVVYVQGVLKQQIFS*
IP20801.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:50:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19426-PA | 206 | GG19426-PA | 1..194 | 1..172 | 274 | 35.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33252-PA | 174 | CG33252-PA | 1..174 | 1..174 | 892 | 100 | Plus |
CG43075-PA | 174 | CG43075-PA | 1..172 | 1..172 | 633 | 71.5 | Plus |
CG32588-PA | 170 | CG32588-PA | 1..169 | 1..173 | 420 | 52.3 | Plus |
CG9030-PB | 210 | CG9030-PB | 1..192 | 1..172 | 212 | 28.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:50:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11999-PA | 174 | GM11999-PA | 1..172 | 1..172 | 554 | 63.4 | Plus |
Dsec\GM11997-PA | 174 | GM11997-PA | 1..172 | 1..172 | 538 | 62.2 | Plus |
Dsec\GM13355-PA | 162 | GM13355-PA | 1..159 | 1..171 | 468 | 59.1 | Plus |
Dsec\GM13356-PA | 162 | GM13356-PA | 1..159 | 1..171 | 468 | 59.1 | Plus |
Dsec\GM13354-PA | 162 | GM13354-PA | 1..159 | 1..171 | 468 | 59.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:50:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24501-PA | 174 | GD24501-PA | 1..172 | 1..172 | 570 | 65.7 | Plus |
Dsim\GD15816-PA | 172 | GD15816-PA | 1..171 | 1..171 | 539 | 63.2 | Plus |
Dsim\GD24640-PA | 161 | GD24640-PA | 1..161 | 1..173 | 426 | 54.9 | Plus |
Dsim\GD15713-PA | 162 | GD15713-PA | 1..159 | 1..171 | 423 | 54.4 | Plus |
Dsim\GD15714-PA | 155 | GD15714-PA | 1..129 | 1..141 | 366 | 57.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16063-PA | 180 | GE16063-PA | 6..177 | 6..172 | 323 | 39 | Plus |
Dyak\GE16065-PA | 180 | GE16065-PA | 6..177 | 6..172 | 313 | 39 | Plus |
Dyak\GE16078-PA | 205 | GE16078-PA | 1..193 | 1..172 | 174 | 28.4 | Plus |