Clone IP21078 Report

Search the DGRC for IP21078

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:210
Well:78
Vector:pOT2
Associated Gene/TranscriptCG8673-RA
Protein status:IP21078.pep: gold
Sequenced Size:1399

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8673 2008-05-05 Release 5.5 slip selected
CG8673 2008-08-15 Release 5.9 accounting
CG8673 2008-12-18 5.12 accounting

Clone Sequence Records

IP21078.complete Sequence

1399 bp assembled on 2008-05-14

GenBank Submission: BT032780

> IP21078.complete
CTTGGTTCAAATCCACCTTGTAGAGCGGTCACATTCCCGGAAAACTAGAA
CTAACTTATAGCCATGGCTGGCCGACTGCTGCGCTGCATCCTGATACTAA
TCCTTGTCAGCTTTACTGTCTTCACGTACGTTTCCAAAGTAGGGGTAATG
GAAAAAGTCGACTATTTTACGACAGCGAAACCTGATGTAATGTCAAAAAA
TCCTGCAATACAGTTAGTGGGCGAAGCGATACGGCTAAGATCCTTTAGGG
AGCCTATTAAAGATTTCGACGATGGATTCGCCGTTCAAATTTCAGGAAAC
AGCAGTGAAGGCAACAAGGATATCTATACAACTATTGATGGCAATATAAA
TGTTGCAGATTCTATTGCGGCAATTAGAAGCAGAAGAATTGATGAGGAAA
AGCTCCATGATGACGGGCTAGACTCAAAAGATATTTTAGCAAAGAAATCA
GTGGTATTGTATTCAATAGATACCGAAGTTCCTGTCCGAATGCCGCTTGT
GAAAACTATCTACAAACCTGGTCACCTGGACAGTGAGATTGATATGGAAA
GAATATGTCCGCAAAAAGGGTTATCGACGCAGTTGTTAGTTTTAATAACC
TCATCCCTTCGGCATTCGGCAGCCAGAATGTCCATACGGCAGACTTGGAT
GCACTACGGCAGCAGAAGGGACGTGGGCATGGCATTTGTCCTGGGAAAAG
GCAAAAACAAATCGGTGAAGAAGGCCATTGATCAGGAGGATTTTATGTAC
CAGGATCTGATAAGAGGACACTTCATAGACTCGTACAACAATCTCACTCT
GAAGACCATTTCTCTGCTGGAATGGGCTGATCTTCACTGTCCGAAGGCTA
AGTACGTTCTCAAGACGGACGATGACATGTTCATCAACGTGCCGAAGTTA
TTGACCCTCATTAGCACGCTTAAAGCCAATAGAACGATCTACGGACGACG
GGCCGAAAATTGGAAACCCATTCGAAACAGGTGGTCTAAATATCACATAT
CCAACGCTCAGTATGGAAAGCCTACCTTTCCCTACTTCACCACCGGACCC
GCCTACTTGCTCACTGGTGACATTGTTCACGCTCTGTATGTCCAATCCCT
GAATACTGCATTCTTAAAGCTGGAAGATGTCTTCACCACGGGCATTGTGG
CTGAAAGTCTGAACATCCGGCGGGTAAATGTGCGCGAGATGGCTAACACC
CGGACGAAATTCGAGACGTGCCACATCCGCGACAAAATTACCATCCATAT
GGTAAGGAATAACGAGCAGTTTACCTTGTGGAATATGTTATTAGACGACA
CCATAAAGTGTGATAACCAGGTATAAAGAAAATGAAAATTATTTAACAAT
TTTTTACAAACAAATAGTTATATACGCTCAACAAAAAAAAAAAAAAAAA

IP21078.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:01:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG8673-RA 1466 CG8673-RA 63..1455 1..1393 6950 99.9 Plus
CG8673.a 1335 CG8673.a 144..1324 213..1393 5890 99.9 Plus
CG8673.b 1329 CG8673.b 139..1318 214..1393 5885 99.9 Plus
CG8673.a 1335 CG8673.a 1..151 1..151 725 98.6 Plus
CG8673.b 1329 CG8673.b 1..142 1..142 695 99.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:30:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8123836..8124809 409..1382 4840 99.8 Plus
chr2L 23010047 chr2L 8123361..8123773 1..413 2050 99.8 Plus
chr2L 23010047 chr2L 8131974..8132500 619..1145 610 74.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:44:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8124804..8125788 409..1393 4910 99.9 Plus
2L 23513712 2L 8124329..8124741 1..413 2050 99.8 Plus
2L 23513712 2L 8132945..8133471 619..1145 610 74.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8124804..8125788 409..1393 4910 99.8 Plus
2L 23513712 2L 8124329..8124741 1..413 2050 99.7 Plus
2L 23513712 2L 8133080..8133223 754..897 405 85.4 Plus
2L 23513712 2L 8132945..8133022 619..696 270 89.7 Plus
2L 23513712 2L 8133361..8133471 1035..1145 195 78.3 Plus
Blast to na_te.dros performed on 2019-03-16 09:30:08 has no hits.

IP21078.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:30:53 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8123361..8123769 1..409 100 -> Plus
chr2L 8123837..8124809 410..1382 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:23:28 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:58:00 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:01:59 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:56:51 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:11:50 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:21:56 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:58:00 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1382 1..1382 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:01:59 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1382 1..1382 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:56:51 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1263 64..1326 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:11:50 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
CG8673-RA 1..1382 1..1382 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:53 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8124329..8124737 1..409 100 -> Plus
2L 8124805..8125777 410..1382 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:53 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8124329..8124737 1..409 100 -> Plus
2L 8124805..8125777 410..1382 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:30:53 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8124329..8124737 1..409 100 -> Plus
2L 8124805..8125777 410..1382 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:01:59 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8124329..8124737 1..409 100 -> Plus
arm_2L 8124805..8125777 410..1382 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:34:11 Download gff for IP21078.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8124805..8125777 410..1382 100   Plus
2L 8124329..8124737 1..409 100 -> Plus

IP21078.pep Sequence

Translation from 63 to 1325

> IP21078.pep
MAGRLLRCILILILVSFTVFTYVSKVGVMEKVDYFTTAKPDVMSKNPAIQ
LVGEAIRLRSFREPIKDFDDGFAVQISGNSSEGNKDIYTTIDGNINVADS
IAAIRSRRIDEEKLHDDGLDSKDILAKKSVVLYSIDTEVPVRMPLVKTIY
KPGHLDSEIDMERICPQKGLSTQLLVLITSSLRHSAARMSIRQTWMHYGS
RRDVGMAFVLGKGKNKSVKKAIDQEDFMYQDLIRGHFIDSYNNLTLKTIS
LLEWADLHCPKAKYVLKTDDDMFINVPKLLTLISTLKANRTIYGRRAENW
KPIRNRWSKYHISNAQYGKPTFPYFTTGPAYLLTGDIVHALYVQSLNTAF
LKLEDVFTTGIVAESLNIRRVNVREMANTRTKFETCHIRDKITIHMVRNN
EQFTLWNMLLDDTIKCDNQV*

IP21078.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:28:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14760-PA 621 GF14760-PA 344..620 140..416 1026 65.3 Plus
Dana\GF14759-PA 231 GF14759-PA 1..231 189..419 850 66.2 Plus
Dana\GF11797-PA 459 GF11797-PA 197..441 204..416 291 30.1 Plus
Dana\GF15701-PA 391 GF15701-PA 112..350 201..416 288 32.6 Plus
Dana\GF20020-PA 332 GF20020-PA 62..324 166..406 282 27.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:28:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10514-PA 399 GG10514-PA 1..399 1..419 1717 77.1 Plus
Dere\GG10515-PA 585 GG10515-PA 308..584 140..416 1041 66.1 Plus
Dere\GG22617-PA 466 GG22617-PA 204..448 204..416 277 28.5 Plus
Dere\GG22618-PA 420 GG22618-PA 158..403 203..416 260 28.5 Plus
Dere\GG15238-PA 430 GG15238-PA 131..388 173..411 257 25.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11617-PA 614 GH11617-PA 337..613 140..416 986 62.1 Plus
Dgri\GH20401-PA 462 GH20401-PA 200..444 204..416 255 27.2 Plus
Dgri\GH15689-PA 453 GH15689-PA 153..374 175..367 243 26.6 Plus
Dgri\GH24143-PA 326 GH24143-PA 73..292 173..383 195 24.9 Plus
Dgri\GH24694-PA 390 GH24694-PA 90..318 175..390 169 23.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8673-PA 420 CG8673-PA 1..420 1..420 2169 100 Plus
CG8668-PB 585 CG8668-PB 308..584 140..416 1006 66.4 Plus
CG8668-PA 585 CG8668-PA 308..584 140..416 1006 66.4 Plus
GalT1-PB 466 CG33145-PB 204..448 204..416 289 29.7 Plus
CG30036-PA 388 CG30036-PA 54..370 165..416 282 28 Plus
CG11357-PD 434 CG11357-PD 137..392 175..411 269 26.7 Plus
CG11357-PC 434 CG11357-PC 137..392 175..411 269 26.7 Plus
CG11357-PB 434 CG11357-PB 137..392 175..411 269 26.7 Plus
CG11357-PA 434 CG11357-PA 137..392 175..411 269 26.7 Plus
CG30037-PA 420 CG30037-PA 156..403 201..416 268 27.8 Plus
brn-PA 325 CG4934-PA 79..271 173..363 218 26.8 Plus
CG3038-PB 358 CG3038-PB 47..286 164..390 210 24.2 Plus
CG3038-PA 388 CG3038-PA 77..316 164..390 210 24.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17920-PA 607 GI17920-PA 336..606 149..416 971 63.5 Plus
Dmoj\GI19588-PA 452 GI19588-PA 190..434 204..416 248 28.5 Plus
Dmoj\GI23623-PA 347 GI23623-PA 73..290 166..368 241 28.8 Plus
Dmoj\GI12738-PA 449 GI12738-PA 79..378 132..367 227 24 Plus
Dmoj\GI16397-PA 323 GI16397-PA 74..289 173..383 225 27.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24762-PA 596 GL24762-PA 319..595 140..416 1006 63.9 Plus
Dper\GL24766-PA 296 GL24766-PA 7..295 129..416 878 56.7 Plus
Dper\GL24763-PA 570 GL24763-PA 35..312 138..415 863 56.5 Plus
Dper\GL24759-PA 230 GL24759-PA 1..229 189..416 783 62 Plus
Dper\GL24774-PA 318 GL24774-PA 41..305 140..416 770 53.4 Plus
Dper\GL24763-PA 570 GL24763-PA 338..570 184..417 716 56.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:28:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21248-PA 598 GA21248-PA 321..597 140..416 1006 63.9 Plus
Dpse\GA28899-PA 230 GA28899-PA 1..229 189..416 783 62 Plus
Dpse\GA28901-PA 289 GA28901-PA 1..227 189..415 759 60.8 Plus
Dpse\GA28903-PA 230 GA28903-PA 1..229 189..416 749 60.7 Plus
Dpse\GA28900-PA 239 GA28900-PA 1..224 189..416 729 59.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:28:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16743-PA 414 GM16743-PA 1..414 1..420 2054 91.4 Plus
Dsec\GM16754-PA 587 GM16754-PA 299..586 126..416 1048 64.3 Plus
Dsec\GM20396-PA 466 GM20396-PA 204..448 204..416 294 30.1 Plus
Dsec\GM20397-PA 420 GM20397-PA 156..403 201..416 258 26.9 Plus
Dsec\GM14670-PA 433 GM14670-PA 135..391 175..411 248 25.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23504-PA 420 GD23504-PA 1..420 1..420 2018 92.6 Plus
Dsim\GD23505-PA 587 GD23505-PA 310..586 140..416 1051 66.4 Plus
Dsim\GD25871-PA 466 GD25871-PA 204..448 204..416 292 30.1 Plus
Dsim\GD25872-PA 420 GD25872-PA 158..403 203..416 261 27.5 Plus
Dsim\GD13851-PA 433 GD13851-PA 135..391 175..411 248 25.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:28:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17692-PA 621 GJ17692-PA 341..620 140..416 956 60.7 Plus
Dvir\GJ18347-PA 476 GJ18347-PA 143..458 172..416 263 25.9 Plus
Dvir\GJ20815-PA 339 GJ20815-PA 55..286 152..368 246 28.2 Plus
Dvir\GJ17018-PA 322 GJ17018-PA 31..273 132..368 210 25.7 Plus
Dvir\GJ15510-PA 472 GJ15510-PA 191..403 173..367 208 24.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24845-PA 594 GK24845-PA 317..593 140..416 996 63.2 Plus
Dwil\GK22248-PA 463 GK22248-PA 201..445 201..416 288 30.5 Plus
Dwil\GK16591-PA 453 GK16591-PA 167..397 175..374 245 27.4 Plus
Dwil\GK15559-PA 329 GK15559-PA 73..275 167..363 203 26.2 Plus
Dwil\GK10121-PA 394 GK10121-PA 105..322 181..390 175 24.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:28:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18734-PA 416 GE18734-PA 1..416 1..419 1803 80.2 Plus
Dyak\GE18735-PA 586 GE18735-PA 309..585 140..416 1045 66.1 Plus
Dyak\GE13486-PA 466 GE13486-PA 204..448 204..416 287 29.7 Plus
Dyak\GE13487-PA 420 GE13487-PA 158..403 203..416 258 27.9 Plus
Dyak\GE21457-PA 435 GE21457-PA 136..393 173..411 252 25.4 Plus

IP21078.hyp Sequence

Translation from 63 to 1325

> IP21078.hyp
MAGRLLRCILILILVSFTVFTYVSKVGVMEKVDYFTTAKPDVMSKNPAIQ
LVGEAIRLRSFREPIKDFDDGFAVQISGNSSEGNKDIYTTIDGNINVADS
IAAIRSRRIDEEKLHDDGLDSKDILAKKSVVLYSIDTEVPVRMPLVKTIY
KPGHLDSEIDMERICPQKGLSTQLLVLITSSLRHSAARMSIRQTWMHYGS
RRDVGMAFVLGKGKNKSVKKAIDQEDFMYQDLIRGHFIDSYNNLTLKTIS
LLEWADLHCPKAKYVLKTDDDMFINVPKLLTLISTLKANRTIYGRRAENW
KPIRNRWSKYHISNAQYGKPTFPYFTTGPAYLLTGDIVHALYVQSLNTAF
LKLEDVFTTGIVAESLNIRRVNVREMANTRTKFETCHIRDKITIHMVRNN
EQFTLWNMLLDDTIKCDNQV*

IP21078.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG8673-PA 420 CG8673-PA 1..420 1..420 2169 100 Plus
CG8668-PB 585 CG8668-PB 308..584 140..416 1006 66.4 Plus
CG8668-PA 585 CG8668-PA 308..584 140..416 1006 66.4 Plus
CG33145-PB 466 CG33145-PB 204..448 204..416 289 29.7 Plus
CG30036-PA 388 CG30036-PA 54..370 165..416 282 28 Plus