Clone IP21143 Report

Search the DGRC for IP21143

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:211
Well:43
Vector:pOT2
Associated Gene/TranscriptCG33459-RA
Protein status:IP21143.pep: gold
Sequenced Size:988

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33459 2008-05-05 Release 5.5 slip selected

Clone Sequence Records

IP21143.complete Sequence

988 bp assembled on 2009-08-07

GenBank Submission: BT099517.1

> IP21143.complete
CGAGCCTCAAGATGAAGTACATTTCGTATTTGCTAGTTTCTTCTATAATT
GCCAACCAACTTCTCTATGGACTGGCCGTTTTACTTGAACCCAATTGTGG
CCAAATACCTTTTCGAATGCGCATTTTTGGCGGAATGGATGCTGGGTTAG
TCTCAACACCATGGATGGCTTTTCTGCACAATCACTTACAGTTCCTGTGC
GGCGGCTCACTTATCACGAGCGAATTCGTGCTTACCGCTGCGCATTGTGT
GATGCCCACTCCGAAAAACTTAACGGTTCGACTGGGAGAGTATGATTGGA
CAAGACAAATGGATTCCATTAACCCGAAACACAGGCACAGGGAATACATG
GTAACTAGAATCTATACGCATCCCAGTTATAGGTCGATTGCAGCCTATGA
TATAGCATTACTGAAACTGAATCAGACAGTTGAATATACAGTTGCCATTC
GTCCCATATGTTTGGTATTGCCTGAAAATTTCCACGAATGGTATTGGCTT
GTGGATTCTGTAGAAGACTTCACTCTTACCGGCTGGGGTGCGACCAAAAC
TGAACCTGTTAGCCAAGTACTCCAATCCGCCAATCTCACCCAGATCGATC
GGGGAACCTGTCACGATCGGTACGGACATTCTGTCGATCATACCCACATC
TGTGCCGGAAGTAGCAAATCATTTGCCTGCGTCGGGGACTCTGGCAGTCC
ACTTGCAATGAAGGTGGTGCATAATCGAAGATACATTCACGCTCAAGTGG
GAATTGTTAGCCGTGGGCCCAAGAATTGTGATGGAGTTACTGTCTTCACA
AACGTTGTAAGCTTCACCGAGTGGATTTTCAGGACCACTTTATACGACGC
GAAATACATGTCCTAACCAAAAGCTAGTAGCAAATCAATAAATTTATATT
AAACTTTGAACTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP21143.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:29:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG33459-RA 1062 CG33459-RA 148..1062 1..915 4575 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:12:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12376020..12376495 439..914 2335 99.4 Plus
chr2R 21145070 chr2R 12375367..12375588 1..222 1080 99.1 Plus
chr2R 21145070 chr2R 12375783..12375952 272..441 835 99.4 Plus
chr2R 21145070 chr2R 12375667..12375716 222..271 250 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:44:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16488705..16489184 437..916 2400 100 Plus
2R 25286936 2R 16488053..16488274 1..222 1110 100 Plus
2R 25286936 2R 16488470..16488639 272..441 850 100 Plus
2R 25286936 2R 16488354..16488403 222..271 250 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16489904..16490383 437..916 2400 100 Plus
2R 25260384 2R 16489252..16489473 1..222 1110 100 Plus
2R 25260384 2R 16489669..16489838 272..441 850 100 Plus
2R 25260384 2R 16489553..16489602 222..271 250 100 Plus
Blast to na_te.dros performed on 2019-03-16 18:12:23 has no hits.

IP21143.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:13:25 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12375367..12375588 1..222 99 -> Plus
chr2R 12375668..12375716 223..271 100 -> Plus
chr2R 12375783..12375952 272..441 99 -> Plus
chr2R 12376023..12376495 442..914 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:13:11 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..855 12..866 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:57:09 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..855 12..866 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:16:58 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..855 12..866 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:33:21 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..855 12..866 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-07 09:06:11 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..855 12..866 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:57:09 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..914 1..914 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:16:58 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..914 1..914 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:33:21 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
CG33459-RA 1..914 1..914 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:13:25 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16488470..16488639 272..441 100 -> Plus
2R 16488053..16488274 1..222 100 -> Plus
2R 16488355..16488403 223..271 100 -> Plus
2R 16488710..16489182 442..914 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:13:25 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16488470..16488639 272..441 100 -> Plus
2R 16488053..16488274 1..222 100 -> Plus
2R 16488355..16488403 223..271 100 -> Plus
2R 16488710..16489182 442..914 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:13:25 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16488470..16488639 272..441 100 -> Plus
2R 16488053..16488274 1..222 100 -> Plus
2R 16488355..16488403 223..271 100 -> Plus
2R 16488710..16489182 442..914 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:16:58 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12375558..12375779 1..222 100 -> Plus
arm_2R 12375860..12375908 223..271 100 -> Plus
arm_2R 12375975..12376144 272..441 100 -> Plus
arm_2R 12376215..12376687 442..914 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:48:42 Download gff for IP21143.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16489252..16489473 1..222 100 -> Plus
2R 16489554..16489602 223..271 100 -> Plus
2R 16489669..16489838 272..441 100 -> Plus
2R 16489909..16490381 442..914 100   Plus

IP21143.hyp Sequence

Translation from 2 to 865

> IP21143.hyp
SLKMKYISYLLVSSIIANQLLYGLAVLLEPNCGQIPFRMRIFGGMDAGLV
STPWMAFLHNHLQFLCGGSLITSEFVLTAAHCVMPTPKNLTVRLGEYDWT
RQMDSINPKHRHREYMVTRIYTHPSYRSIAAYDIALLKLNQTVEYTVAIR
PICLVLPENFHEWYWLVDSVEDFTLTGWGATKTEPVSQVLQSANLTQIDR
GTCHDRYGHSVDHTHICAGSSKSFACVGDSGSPLAMKVVHNRRYIHAQVG
IVSRGPKNCDGVTVFTNVVSFTEWIFRTTLYDAKYMS*

IP21143.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG33459-PA 284 CG33459-PA 1..284 4..287 1526 100 Plus
CG33458-PA 281 CG33458-PA 1..276 4..280 575 44.8 Plus
CG30090-PA 291 CG30090-PA 25..273 28..275 445 41.7 Plus
CG30287-PA 284 CG30287-PA 25..277 27..275 436 40.5 Plus
CG33226-PC 292 CG33226-PC 10..282 7..275 434 38.4 Plus

IP21143.pep Sequence

Translation from 2 to 865

> IP21143.pep
SLKMKYISYLLVSSIIANQLLYGLAVLLEPNCGQIPFRMRIFGGMDAGLV
STPWMAFLHNHLQFLCGGSLITSEFVLTAAHCVMPTPKNLTVRLGEYDWT
RQMDSINPKHRHREYMVTRIYTHPSYRSIAAYDIALLKLNQTVEYTVAIR
PICLVLPENFHEWYWLVDSVEDFTLTGWGATKTEPVSQVLQSANLTQIDR
GTCHDRYGHSVDHTHICAGSSKSFACVGDSGSPLAMKVVHNRRYIHAQVG
IVSRGPKNCDGVTVFTNVVSFTEWIFRTTLYDAKYMS*

IP21143.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11497-PA 284 GF11497-PA 21..273 27..280 360 34.2 Plus
Dana\GF12091-PA 280 GF12091-PA 23..260 27..275 359 36.2 Plus
Dana\GF13370-PA 505 GF13370-PA 7..276 25..278 354 31.8 Plus
Dana\GF11318-PA 308 GF11318-PA 1..210 55..275 348 34.7 Plus
Dana\GF23282-PA 376 GF23282-PA 123..371 40..275 327 34.4 Plus
Dana\GF13370-PA 505 GF13370-PA 307..498 53..276 156 29.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16535-PA 281 GG16535-PA 1..274 2..278 543 41.6 Plus
Dere\GG20540-PA 291 GG20540-PA 25..273 28..275 449 41.1 Plus
Dere\GG20769-PA 285 GG20769-PA 25..282 27..279 426 40 Plus
Dere\GG20038-PA 289 GG20038-PA 1..282 4..287 402 35.3 Plus
Dere\GG18032-PA 282 GG18032-PA 3..274 5..276 394 34.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20292-PA 242 GH20292-PA 1..235 50..275 362 39.3 Plus
Dgri\GH20624-PA 374 GH20624-PA 106..367 31..278 359 34.8 Plus
Dgri\GH17524-PA 374 GH17524-PA 106..367 31..278 359 34.8 Plus
Dgri\GH23917-PA 235 GH23917-PA 1..228 39..275 351 39.8 Plus
Dgri\GH19627-PA 370 GH19627-PA 119..365 40..275 341 36.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG33459-PA 284 CG33459-PA 1..284 4..287 1526 100 Plus
CG33458-PA 281 CG33458-PA 1..276 4..280 575 44.8 Plus
CG30090-PA 291 CG30090-PA 25..273 28..275 445 41.7 Plus
CG30287-PA 284 CG30287-PA 25..277 27..275 436 40.5 Plus
CG33226-PC 292 CG33226-PC 10..282 7..275 434 38.4 Plus
CG30098-PA 264 CG30098-PA 7..260 10..280 429 37.9 Plus
CG18636-PA 349 CG18636-PA 12..280 12..277 421 39.2 Plus
CG30082-PB 280 CR30082-PB 21..275 25..279 418 39.3 Plus
CG43335-PA 281 CG43335-PA 1..272 4..275 417 36.5 Plus
CG43336-PA 279 CG43336-PA 15..277 21..281 405 38.6 Plus
CG30091-PA 526 CG30091-PA 18..278 23..280 400 35.7 Plus
CG30289-PA 316 CG30289-PA 11..272 11..276 398 37.5 Plus
CG30286-PB 277 CG30286-PB 16..268 22..275 384 33.1 Plus
CG30087-PA 277 CG30087-PA 23..275 25..280 383 36.1 Plus
CG30288-PC 282 CG30288-PC 26..270 27..275 383 38.4 Plus
CG33225-PB 292 CG33225-PB 1..277 2..278 381 33.6 Plus
CG33225-PC 307 CG33225-PC 25..292 10..278 380 34.5 Plus
CG30283-PB 273 CG30283-PB 29..266 28..278 378 35.8 Plus
CG33462-PA 300 CG33462-PA 20..271 23..277 378 36.8 Plus
CG30088-PB 281 CG30088-PB 16..272 7..275 373 34.8 Plus
CG30414-PC 305 CG30414-PC 1..290 4..275 373 35.5 Plus
CG30414-PB 305 CG30414-PB 1..290 4..275 373 35.5 Plus
CG30187-PE 489 CG30187-PE 19..263 23..278 366 35.5 Plus
CG30187-PF 500 CG30187-PF 19..263 23..278 366 35.5 Plus
CG33461-PB 287 CG33461-PB 4..278 10..275 362 36.2 Plus
CG30083-PB 279 CG30083-PB 17..255 24..275 357 32.3 Plus
CG43110-PA 483 CG43110-PA 7..254 9..275 354 33.2 Plus
CG43110-PB 483 CG43110-PB 7..254 9..275 354 33.2 Plus
CG18420-PA 299 CG18420-PA 20..269 21..280 351 37.7 Plus
CG10764-PA 523 CG10764-PA 26..263 28..278 337 35.2 Plus
CG43742-PB 474 CG43742-PB 4..258 6..280 335 33.2 Plus
CG5909-PA 381 CG5909-PA 121..376 31..275 333 33.3 Plus
CG14227-PB 286 CG14227-PB 22..278 23..276 329 32 Plus
grass-PA 335 CG5896-PA 68..329 31..278 310 31.6 Plus
grass-PB 377 CG5896-PB 110..371 31..278 310 31.6 Plus
MP1-PA 390 CG1102-PA 116..384 28..275 302 34.1 Plus
MP1-PC 399 CG1102-PC 125..393 28..275 302 34.1 Plus
MP1-PE 400 CG1102-PE 126..394 28..275 302 34.1 Plus
CG33465-PC 488 CG33465-PC 1..264 7..278 301 33.5 Plus
CG1773-PA 317 CG1773-PA 41..301 27..275 291 31.5 Plus
CG32260-PC 395 CG32260-PC 147..388 40..275 291 36 Plus
CG32260-PA 575 CG32260-PA 327..568 40..275 291 36 Plus
CG30002-PB 311 CG30002-PB 41..301 27..275 290 33.9 Plus
CG9733-PB 417 CG9733-PB 150..411 30..275 285 32.1 Plus
CG9733-PA 418 CG9733-PA 151..412 30..275 285 32.1 Plus
CG11313-PC 367 CG11313-PC 107..361 32..275 281 33 Plus
CG4650-PB 299 CG4650-PB 19..258 23..275 280 30.2 Plus
CG11313-PD 370 CG11313-PD 107..364 32..275 280 32.6 Plus
ea-PA 392 CG4920-PA 116..389 28..278 278 33.5 Plus
Sp7-PF 391 CG3066-PF 117..388 23..278 271 30.8 Plus
Sp7-PE 391 CG3066-PE 117..388 23..278 271 30.8 Plus
CG30091-PA 526 CG30091-PA 309..520 44..275 216 28.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23202-PA 376 GI23202-PA 109..367 31..275 341 32.7 Plus
Dmoj\GI22268-PA 380 GI22268-PA 119..375 31..275 307 33.2 Plus
Dmoj\GI10853-PA 285 GI10853-PA 13..282 30..278 300 32.2 Plus
Dmoj\GI22780-PA 412 GI22780-PA 138..408 32..277 295 32.1 Plus
Dmoj\GI24877-PA 392 GI24877-PA 105..389 16..278 285 32.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10743-PA 279 GL10743-PA 22..272 27..277 564 48.1 Plus
Dper\GL16656-PA 282 GL16656-PA 1..274 4..278 532 43.1 Plus
Dper\GL11321-PA 284 GL11321-PA 1..276 4..278 512 41.3 Plus
Dper\GL11857-PA 283 GL11857-PA 20..279 23..282 478 38.8 Plus
Dper\GL17488-PA 282 GL17488-PA 1..273 2..275 451 38.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24468-PA 278 GA24468-PA 6..271 14..277 575 47.4 Plus
Dpse\GA24684-PA 282 GA24684-PA 1..274 4..278 542 44.1 Plus
Dpse\GA24685-PA 284 GA24685-PA 1..276 4..278 527 42.4 Plus
Dpse\GA15642-PA 283 GA15642-PA 20..279 23..282 480 38.8 Plus
Dpse\GA24176-PA 282 GA24176-PA 1..273 2..275 451 38.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21703-PA 251 GM21703-PA 1..251 39..287 1101 82.1 Plus
Dsec\GM21701-PA 347 GM21701-PA 133..347 70..285 474 45.4 Plus
Dsec\GM20059-PA 263 GM20059-PA 19..257 22..278 439 39.7 Plus
Dsec\GM14686-PA 346 GM14686-PA 11..280 11..277 428 39.1 Plus
Dsec\GM15714-PA 284 GM15714-PA 25..283 27..280 423 40.4 Plus
Dsec\GM21701-PA 347 GM21701-PA 24..136 27..146 212 44.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11200-PA 251 GD11200-PA 1..251 39..287 1122 83.7 Plus
Dsim\GD19032-PA 401 GD19032-PA 139..392 22..275 456 39.8 Plus
Dsim\GD25604-PA 280 GD25604-PA 21..275 25..279 434 39.2 Plus
Dsim\GD25191-PA 283 GD25191-PA 24..276 27..275 428 40.9 Plus
Dsim\GD25541-PA 263 GD25541-PA 7..257 10..278 424 38.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:41:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21214-PA 280 GJ21214-PA 12..273 23..275 385 35.3 Plus
Dvir\GJ21978-PA 296 GJ21978-PA 28..288 23..275 383 36 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 1..261 24..275 359 34.7 Plus
Dvir\GJ14460-PA 396 GJ14460-PA 124..393 30..278 336 35.3 Plus
Dvir\GJ22863-PA 372 GJ22863-PA 105..363 31..275 325 31.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11885-PA 388 GK11885-PA 127..383 31..275 350 34.4 Plus
Dwil\GK13188-PA 395 GK13188-PA 121..389 32..275 321 35.1 Plus
Dwil\GK11884-PA 375 GK11884-PA 116..369 40..278 317 31.5 Plus
Dwil\GK22647-PA 279 GK22647-PA 17..276 30..278 294 33 Plus
Dwil\GK13136-PA 412 GK13136-PA 145..406 30..275 294 33.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:41:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11797-PA 351 GE11797-PA 212..351 148..287 501 65.7 Plus
Dyak\GE11574-PA 456 GE11574-PA 23..272 23..278 463 38.3 Plus
Dyak\GE11725-PA 296 GE11725-PA 20..270 23..275 448 41.1 Plus
Dyak\GE24321-PA 309 GE24321-PA 48..300 23..275 443 38.4 Plus
Dyak\GE11797-PA 351 GE11797-PA 3..203 52..253 442 45.1 Plus
Dyak\GE14063-PA 264 GE14063-PA 7..260 10..280 429 37.5 Plus
Dyak\GE11574-PA 456 GE11574-PA 294..452 114..278 267 34.9 Plus