Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP21193.complete Sequence
1223 bp assembled on 2008-05-22
GenBank Submission: BT032964
> IP21193.complete
CGTAGCCAAAGATACTATGATTTCGGTAGCTCTGATTATCTTGTGCTTTT
TTCCGTTCGTGCAAAATGAGTACTTTCGTCCTTCGTACCAAGTCCTTGTG
CGCAAAAGGAATACTCAAGGAGATTTGATCGACGGCCATTGCTATGGCAA
TATCATTCAGAGTCGCTTGGTTTTAACATCAGCATCGTGTTTATTGAGTG
ATAACGATTTCGTAAATGGTAGGGAATTGTTAAATGCTGATGAGTTGGCG
GTATCATTCAAAGGCGAAGATTTGAACGAGTTGATATACCTCGTTGGTGG
CATAGACGTATATCCGCAGTTCAATTTCTCATCGTTGGACAATGATATAG
CGATCCTAAGTCTCAGTACGCAACTTCCGCTTTCCGAGCGAAACGATATT
GAATGGGTTTTAGTCGCTGACTATGATATTACCGATTTTCCATTGGAGGA
GGGTGTGGAATCTTACGTTTGGAAAAATGCGGATGGAGAAAACATATATC
CCGGTTATGGTGTTATTCATGAAAGTAATTTAGTTGGAATCATTTCCTAT
GGCTTGCCATTGAAAAATAAACGGGAATCTAATCTTGAAGTTCGGCGCCC
AAATAGGTTTACGCAATTAAATCCATATTTAAGTTGGATATATACAATAA
TACAGAATACAGAGATTGCGGACATTCAAAATAACAACTACAGTGTATCT
CTACCTTATCGTCAAAGAAAAATCGCAGAAATAGTGGAGGAATTCGTTGA
GCCTGATGCGGTGTATTTTCCAGACCCAGCAAACCCCATTAAAGATGAGA
TTGAAACTGAGGTAGAAGATTTGACGGACTCAGAAACTGATGCTGTAAAC
GTGGAAAGCGTCTCAGAAGATTTTTTAAACACGGAGGACCCTTTTAATGA
AAACATTGAAAGTGAGAAGGAATTCCTAAAAAACCGAGCAAACACATCTA
AGGCCAAAGGAGTTTGTGCATGGATATTCACATTTAATTTTCTTCTAGCG
ATAACTCGCACAATAAATTTCCATTTTTTTTAACTAAATTTTCAATTTAT
TTTTTGATCTTCAATAAGATCAGTTTCCATAACTTAAATGTATATTTTAT
CTGAAAAGTATCAAAAGAACTGCATTAAGATTCAAATTTTTAAAACATAA
ATTGTAAACAGCATCTGTATTGATTTGGTGTATAATAAATTGTTATCAGC
TAAAAAAAAAAAAAAAAAAAAAA
IP21193.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:51:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34043-RB | 1335 | CG34043-RB | 135..1335 | 1..1201 | 6005 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:27:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 10279236..10279703 | 468..1 | 2340 | 100 | Minus |
chr2L | 23010047 | chr2L | 10277808..10278115 | 1201..894 | 1450 | 98.1 | Minus |
chr2L | 23010047 | chr2L | 10278910..10279177 | 734..467 | 1325 | 99.6 | Minus |
chr2L | 23010047 | chr2L | 10278486..10278545 | 792..733 | 285 | 98.3 | Minus |
chr2L | 23010047 | chr2L | 10278213..10278271 | 897..839 | 280 | 98.3 | Minus |
chr2L | 23010047 | chr2L | 10278377..10278427 | 839..789 | 255 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:44:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10280379..10280846 | 468..1 | 2340 | 100 | Minus |
2L | 23513712 | 2L | 10278949..10279258 | 1203..894 | 1550 | 100 | Minus |
2L | 23513712 | 2L | 10280053..10280320 | 734..467 | 1340 | 100 | Minus |
2L | 23513712 | 2L | 10279629..10279688 | 792..733 | 285 | 98.3 | Minus |
2L | 23513712 | 2L | 10279356..10279414 | 897..839 | 280 | 98.3 | Minus |
2L | 23513712 | 2L | 10279520..10279570 | 839..789 | 255 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10280379..10280846 | 468..1 | 2340 | 100 | Minus |
2L | 23513712 | 2L | 10278949..10279258 | 1203..894 | 1550 | 100 | Minus |
2L | 23513712 | 2L | 10280053..10280320 | 734..467 | 1340 | 100 | Minus |
2L | 23513712 | 2L | 10279629..10279688 | 792..733 | 285 | 98.3 | Minus |
2L | 23513712 | 2L | 10279356..10279414 | 897..839 | 280 | 98.3 | Minus |
2L | 23513712 | 2L | 10279520..10279570 | 839..789 | 255 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 20:27:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Juan | 4236 | Juan JUAN 4236bp | 3661..3804 | 1010..1159 | 121 | 58.9 | Plus |
Tc1-2 | 1644 | Tc1-2 TC1-2 1644bp | 173..442 | 927..1194 | 120 | 54.2 | Plus |
Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 1103..1247 | 1187..1038 | 116 | 56 | Minus |
1360 | 3409 | 1360 1360 3409bp | 1131..1154 | 1036..1013 | 111 | 95.8 | Minus |
IP21193.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:27:52 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 10278910..10279177 | 467..734 | 99 | <- | Minus |
chr2L | 10277808..10278115 | 894..1201 | 98 | <- | Minus |
chr2L | 10278217..10278270 | 840..893 | 100 | <- | Minus |
chr2L | 10278377..10278427 | 789..839 | 100 | <- | Minus |
chr2L | 10278490..10278543 | 735..788 | 100 | <- | Minus |
chr2L | 10279238..10279703 | 1..466 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:24:08 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1017 | 17..1033 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:37:58 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1017 | 17..1033 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:08:44 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1017 | 17..1033 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:43:45 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RA | 1..834 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:13 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1017 | 17..1033 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:07:10 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1201 | 1..1201 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:37:58 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 1..1201 | 1..1201 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:08:44 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 27..1227 | 1..1201 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:43:45 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RA | 1..834 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:13 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34043-RB | 27..1227 | 1..1201 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:52 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10278951..10279258 | 894..1201 | 100 | <- | Minus |
2L | 10279360..10279413 | 840..893 | 100 | <- | Minus |
2L | 10279520..10279570 | 789..839 | 100 | <- | Minus |
2L | 10279633..10279686 | 735..788 | 100 | <- | Minus |
2L | 10280053..10280320 | 467..734 | 100 | <- | Minus |
2L | 10280381..10280846 | 1..466 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:52 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10278951..10279258 | 894..1201 | 100 | <- | Minus |
2L | 10279360..10279413 | 840..893 | 100 | <- | Minus |
2L | 10279520..10279570 | 789..839 | 100 | <- | Minus |
2L | 10279633..10279686 | 735..788 | 100 | <- | Minus |
2L | 10280053..10280320 | 467..734 | 100 | <- | Minus |
2L | 10280381..10280846 | 1..466 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:52 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10278951..10279258 | 894..1201 | 100 | <- | Minus |
2L | 10279360..10279413 | 840..893 | 100 | <- | Minus |
2L | 10279520..10279570 | 789..839 | 100 | <- | Minus |
2L | 10279633..10279686 | 735..788 | 100 | <- | Minus |
2L | 10280053..10280320 | 467..734 | 100 | <- | Minus |
2L | 10280381..10280846 | 1..466 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:08:44 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10278951..10279258 | 894..1201 | 100 | <- | Minus |
arm_2L | 10279360..10279413 | 840..893 | 100 | <- | Minus |
arm_2L | 10279520..10279570 | 789..839 | 100 | <- | Minus |
arm_2L | 10279633..10279686 | 735..788 | 100 | <- | Minus |
arm_2L | 10280053..10280320 | 467..734 | 100 | <- | Minus |
arm_2L | 10280381..10280846 | 1..466 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:20:46 Download gff for
IP21193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10278951..10279258 | 894..1201 | 100 | <- | Minus |
2L | 10279360..10279413 | 840..893 | 100 | <- | Minus |
2L | 10279520..10279570 | 789..839 | 100 | <- | Minus |
2L | 10279633..10279686 | 735..788 | 100 | <- | Minus |
2L | 10280053..10280320 | 467..734 | 100 | <- | Minus |
2L | 10280381..10280846 | 1..466 | 100 | | Minus |
IP21193.hyp Sequence
Translation from 0 to 1032
> IP21193.hyp
VAKDTMISVALIILCFFPFVQNEYFRPSYQVLVRKRNTQGDLIDGHCYGN
IIQSRLVLTSASCLLSDNDFVNGRELLNADELAVSFKGEDLNELIYLVGG
IDVYPQFNFSSLDNDIAILSLSTQLPLSERNDIEWVLVADYDITDFPLEE
GVESYVWKNADGENIYPGYGVIHESNLVGIISYGLPLKNKRESNLEVRRP
NRFTQLNPYLSWIYTIIQNTEIADIQNNNYSVSLPYRQRKIAEIVEEFVE
PDAVYFPDPANPIKDEIETEVEDLTDSETDAVNVESVSEDFLNTEDPFNE
NIESEKEFLKNRANTSKAKGVCAWIFTFNFLLAITRTINFHFF*
IP21193.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:18:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34043-PB | 338 | CG34043-PB | 1..338 | 6..343 | 1760 | 100 | Plus |
IP21193.pep Sequence
Translation from 1 to 1032
> IP21193.pep
VAKDTMISVALIILCFFPFVQNEYFRPSYQVLVRKRNTQGDLIDGHCYGN
IIQSRLVLTSASCLLSDNDFVNGRELLNADELAVSFKGEDLNELIYLVGG
IDVYPQFNFSSLDNDIAILSLSTQLPLSERNDIEWVLVADYDITDFPLEE
GVESYVWKNADGENIYPGYGVIHESNLVGIISYGLPLKNKRESNLEVRRP
NRFTQLNPYLSWIYTIIQNTEIADIQNNNYSVSLPYRQRKIAEIVEEFVE
PDAVYFPDPANPIKDEIETEVEDLTDSETDAVNVESVSEDFLNTEDPFNE
NIESEKEFLKNRANTSKAKGVCAWIFTFNFLLAITRTINFHFF*
IP21193.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:54:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14120-PA | 270 | GF14120-PA | 1..249 | 6..267 | 625 | 47.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:54:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23958-PA | 312 | GG23958-PA | 1..274 | 6..279 | 1248 | 85.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34043-PB | 338 | CG34043-PB | 1..338 | 6..343 | 1760 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:54:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL19164-PA | 248 | GL19164-PA | 2..242 | 6..244 | 516 | 45.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:54:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11857-PA | 267 | GM11857-PA | 1..239 | 6..244 | 1184 | 92.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:54:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22281-PA | 285 | GD22281-PA | 1..274 | 6..279 | 1348 | 92.7 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:54:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK14867-PA | 253 | GK14867-PA | 1..242 | 6..244 | 376 | 35.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:54:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26207-PA | 290 | GE26207-PA | 1..286 | 6..294 | 1285 | 84.1 | Plus |