Clone IP21261 Report

Search the DGRC for IP21261

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:212
Well:61
Vector:pOT2
Associated Gene/TranscriptbetaNACtes1-RA
Protein status:IP21261.pep: gold
Sequenced Size:1099

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13402 2008-05-05 Release 5.5 slip selected

Clone Sequence Records

IP21261.complete Sequence

1099 bp assembled on 2008-05-14

GenBank Submission: BT032969

> IP21261.complete
TTGATTCACATCTCCAAGCGAATATTACTTAATATTATATTAATTAATAT
ATTAATTTGTAAAGCACAGCATTTTCAAGGTTTTCCTAACGAAACAATGG
ATTTCAAGAAGCTGAAGAAAATGGAGGAGGTGGTGCGCATCGGCGGCAAA
GGATCTATGCGCCGCAAGCATAAGAGATTCCCATCCTCGGCTGCGGCCGA
GAAGCGCGTGCAAGCCACATTGGCCATGTTGCCGTTGAAGAATATCGACG
AAATCGAGGAGGTGACCATCGAGTTCACCAATTCCAGTAAGGTTGTGTTA
ACCATGCCCAGGGTTCAGAGCACCGCTGGCAATTCTTTCTTCGTGGTTAG
TGGCGATTTCGTGCGCAAGTCGTCAACAGCTGGCCCATCGAAAGTGGCCA
AGGCAGCCAATGCGCCCAAGGCACCCATGCCACCTAAGCCACCCAAGCCG
GAAGCTTTTTCCGACAAAAAGCCAGAATCAGAGGAGTCCATTAAGGTGGC
CAAGAAGCCCAAGAAGCCGCGCAATCGTGTTCGTCCTCGCAACAAGAAGG
TCCAAATGATGCTCTCCAAAAACAAAGAGGACGCAGCCATGGCTGGCTGG
GATTCGGAGCCGAAGCTTAGCAATGGTAAACCAATTTTGATCTCCTCTGA
AGATGGCAGCGATCCGGATAATGAGAAGGTGCCATCGGATGAGTCTGATG
TGGATCGGACCATAGTCTGCGACAAAGATTCGCTGGGAAGCTTCGGCGAT
GATTCCGACGGCAAGGAGGACGTTGACACTACGGAGTCGATCTACCTGTC
CTCCTACTCCAATTACTATTATTTGACGGAGCAGCTCTATCCAAATACTT
ATCGCGTTCAGGTCTCAGAGGACGAAGATTAGGCATATTCATTTGTTGCT
ACATTTGTACCAATTTCAAAAATAAATCGTATGAATTGAGAAAGTTGAGA
CAGAAAAAGGTTCCATATTCTATAGATTTGTACTTTAATCTCTTGGTGTT
TATTGAAAGCATTGGTTTTCTCTACACTTATGGAAATTTTAATGATCTAT
AGTTCCAAAATAAAAAAAAGTTATAAATTTGAAAAAAAAAAAAAAAAAA

IP21261.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG13402.a 1067 CG13402.a 2..1067 1..1066 5330 100 Plus
CG32601-RA 980 CG32601-RA 26..957 1..929 3450 91.5 Plus
CG32598-RA 988 CG32598-RA 26..957 1..929 3405 91.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 14062041..14063043 1080..78 4910 99.3 Minus
chrX 22417052 chrX 14269539..14270393 78..929 3160 91.6 Plus
chrX 22417052 chrX 14206737..14207591 929..78 3130 91.3 Minus
chrX 22417052 chrX 14271446..14271983 398..929 1825 90.1 Plus
chrX 22417052 chrX 14205248..14205614 929..566 1320 91.3 Minus
chrX 22417052 chrX 14271069..14271441 78..447 1020 85.5 Plus
chrX 22417052 chrX 14205679..14206024 420..78 930 85.3 Minus
chrX 22417052 chrX 14063094..14063174 81..1 405 100 Minus
chrX 22417052 chrX 15466633..15466808 587..764 355 82.1 Plus
chrX 22417052 chrX 14206075..14206155 81..1 330 93.8 Minus
chrX 22417052 chrX 14207642..14207722 81..1 300 91.4 Minus
chrX 22417052 chrX 14269408..14269488 1..81 300 91.4 Plus
chrX 22417052 chrX 14205611..14205710 512..416 270 87 Minus
chrX 22417052 chrX 14270938..14271018 1..81 270 88.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:45:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14171487..14172489 1080..78 5015 100 Minus
X 23542271 X 14378958..14379812 78..929 3160 91.6 Plus
X 23542271 X 14316144..14316998 929..78 3115 91.2 Minus
X 23542271 X 14380865..14381402 398..929 1810 90 Plus
X 23542271 X 14314655..14315021 929..566 1320 91.3 Minus
X 23542271 X 14380488..14380860 78..447 1020 85.5 Plus
X 23542271 X 14315096..14315431 410..78 925 85.7 Minus
X 23542271 X 14172540..14172620 81..1 405 100 Minus
X 23542271 X 15576746..15576921 587..764 355 82.1 Plus
X 23542271 X 14315482..14315562 81..1 330 93.8 Minus
X 23542271 X 14317049..14317129 81..1 300 91.4 Minus
X 23542271 X 14378827..14378907 1..81 300 91.4 Plus
X 23542271 X 14380357..14380437 1..81 285 90.1 Plus
X 23542271 X 14315018..14315117 512..416 255 86 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 14179585..14180587 1080..78 5015 100 Minus
X 23527363 X 14387056..14387910 78..929 3170 91.5 Plus
X 23527363 X 14324242..14325096 929..78 3125 91.2 Minus
X 23527363 X 14388963..14389500 398..929 1830 89.9 Plus
X 23527363 X 14322753..14323119 929..566 1330 91.2 Minus
X 23527363 X 14388586..14388958 78..447 1030 85.5 Plus
X 23527363 X 14323194..14323529 410..78 935 85.7 Minus
X 23527363 X 14180638..14180718 81..1 405 100 Minus
X 23527363 X 15584844..15584942 587..685 345 89.8 Plus
X 23527363 X 14323580..14323660 81..1 330 93.8 Minus
X 23527363 X 14386925..14387005 1..81 300 91.3 Plus
X 23527363 X 14325147..14325227 81..1 300 91.3 Minus
X 23527363 X 14388455..14388535 1..81 285 90.1 Plus
X 23527363 X 14323116..14323215 512..416 265 86 Minus
X 23527363 X 15585029..15585073 885..929 165 91.1 Plus
X 23527363 X 14388917..14388965 397..445 140 85.7 Plus
X 23527363 X 15584715..15584766 337..388 140 84.6 Plus
Blast to na_te.dros performed on 2019-03-16 11:46:47 has no hits.

IP21261.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:48:02 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 14062070..14063041 80..1051 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:24:33 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 1..786 97..882 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:55:53 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 1..786 97..882 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:25:04 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 1..786 97..882 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:54:59 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 1..786 97..882 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:26:09 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 1..786 97..882 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:19:55 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 1..847 97..943 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:55:52 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 5..1084 1..1080 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:25:04 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 5..1084 1..1080 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:54:59 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
CG13402-RA 1..847 97..943 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:26:09 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
betaNACtes1-RA 5..1084 1..1080 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:48:02 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
X 14171486..14172487 80..1081 99 <- Minus
X 14172542..14172620 1..79 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:48:02 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
X 14171486..14172487 80..1081 99 <- Minus
X 14172542..14172620 1..79 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:48:02 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
X 14171486..14172487 80..1081 99 <- Minus
X 14172542..14172620 1..79 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:25:04 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14065519..14066520 80..1081 99 <- Minus
arm_X 14066575..14066653 1..79 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:32:47 Download gff for IP21261.complete
Subject Subject Range Query Range Percent Splice Strand
X 14179584..14180585 80..1081 99 <- Minus
X 14180640..14180718 1..79 100   Minus

IP21261.pep Sequence

Translation from 0 to 881

> IP21261.pep
LIHISKRILLNIILINILICKAQHFQGFPNETMDFKKLKKMEEVVRIGGK
GSMRRKHKRFPSSAAAEKRVQATLAMLPLKNIDEIEEVTIEFTNSSKVVL
TMPRVQSTAGNSFFVVSGDFVRKSSTAGPSKVAKAANAPKAPMPPKPPKP
EAFSDKKPESEESIKVAKKPKKPRNRVRPRNKKVQMMLSKNKEDAAMAGW
DSEPKLSNGKPILISSEDGSDPDNEKVPSDESDVDRTIVCDKDSLGSFGD
DSDGKEDVDTTESIYLSSYSNYYYLTEQLYPNTYRVQVSEDED*

IP21261.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22559-PA 538 GF22559-PA 1..300 33..293 281 34.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17843-PA 262 GG17843-PA 1..262 33..293 557 52.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
betaNACtes1-PA 261 CG13402-PA 1..261 33..293 1336 100 Plus
betaNACtes3-PA 262 CG32601-PA 1..262 33..293 1137 87 Plus
betaNACtes6-PA 262 CG32598-PA 1..262 33..293 1113 85.9 Plus
betaNACtes4-PA 263 CG18313-PA 1..261 33..273 932 75.1 Plus
betaNACtes2-PA 197 CG18157-PA 1..197 33..255 700 68 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17676-PA 263 GM17676-PA 1..263 33..293 869 73.9 Plus
Dsec\GM17553-PA 216 GM17553-PA 1..200 33..245 654 70.6 Plus
Dsec\GM24659-PA 144 GM24659-PA 1..128 102..245 443 71.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17171-PA 257 GD17171-PA 1..257 33..293 900 74.6 Plus
Dsim\GD24509-PA 252 GD24509-PA 1..206 33..252 711 71 Plus
Dsim\GD17170-PA 252 GD17170-PA 1..206 33..252 683 71.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10317-PA 260 GK10317-PA 1..236 33..258 186 31.6 Plus
Dwil\GK10318-PA 341 GK10318-PA 2..90 33..120 166 39.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17140-PA 248 GE17140-PA 1..248 33..293 569 55.9 Plus

IP21261.hyp Sequence

Translation from 0 to 881

> IP21261.hyp
LIHISKRILLNIILINILICKAQHFQGFPNETMDFKKLKKMEEVVRIGGK
GSMRRKHKRFPSSAAAEKRVQATLAMLPLKNIDEIEEVTIEFTNSSKVVL
TMPRVQSTAGNSFFVVSGDFVRKSSTAGPSKVAKAANAPKAPMPPKPPKP
EAFSDKKPESEESIKVAKKPKKPRNRVRPRNKKVQMMLSKNKEDAAMAGW
DSEPKLSNGKPILISSEDGSDPDNEKVPSDESDVDRTIVCDKDSLGSFGD
DSDGKEDVDTTESIYLSSYSNYYYLTEQLYPNTYRVQVSEDED*

IP21261.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
betaNACtes1-PA 261 CG13402-PA 1..261 33..293 1336 100 Plus
betaNACtes3-PA 262 CG32601-PA 1..262 33..293 1137 87 Plus
betaNACtes6-PA 262 CG32598-PA 1..262 33..293 1113 85.9 Plus
betaNACtes4-PA 263 CG18313-PA 1..261 33..273 932 75.1 Plus
betaNACtes2-PA 197 CG18157-PA 1..197 33..255 700 68 Plus