Clone IP21379 Report

Search the DGRC for IP21379

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:213
Well:79
Vector:pOT2
Associated Gene/TranscriptTry29F-RB
Protein status:IP21379.pep: Imported from assembly
Sequenced Size:877

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Try29F 2008-05-05 Release 5.5 slip selected
Try29F 2008-08-15 Release 5.9 accounting
Try29F 2008-12-18 5.12 accounting

Clone Sequence Records

IP21379.complete Sequence

877 bp assembled on 2008-05-14

GenBank Submission: BT032800

> IP21379.complete
ATTGGATTGACCGGCATGGCAAAGACGATTCTTCATCTGTTTATCGGCGG
GATTCTCCTGGTAAATCTGAGCTTAGGAGCCACTGTAAGGCGCCCACGCC
TGGATGGACGCATTGTGGGCGGCCAGGTGGCTAACATAAAGGACATTCCC
TATCAGGTTTCCCTGCAGCGTAGCTATCACTTCTGTGGTGGCTCTTTAAT
CGCTCAGGGTTGGGTGCTCACAGCTGCCCACTGCACTGAAGGATCTGCGA
TACTCTTATCCAAAGTTCGTATTGGCTCCTCGCGGACTTCTGTGGGCGGT
CAATTGGTGGGGATCAAGCGAGTTCATCGACATCCCAAATTCGATGCCTA
CACCATTGACTTTGACTTTTCGCTGCTCGAACTGGAGGAATATAGTGCCA
AGAACGTGACGCAGGCTTTCGTTGGGCTTCCCGAACAGGATGCGGACATT
GCCGATGGTACACCGGTCCTGGTTTCCGGCTGGGGAAACACGCAGAGCGC
CCAGGAGACCTCAGCCGTTCTGCGGTCCGTTACGGTGCCCAAAGTCAGTC
AGACGCAGTGCACAGAGGCTTATGGCAACTTTGGCAGCATCACGGATCGC
ATGCTCTGCGCCGGATTGCCGGAGGGCGGCAAGGACGCCTGCCAAGGTGA
CTCCGGAGGACCTCTCGCTGCTGATGGTGTCCTTTGGGGCGTGGTCTCCT
GGGGCTACGGTTGTGCTAGACCAAACTATCCCGGCGTTTATTCGCGAGTC
TCTGCGGTTCGTGACTGGATTAGCTCTGTTAGTGGCATTTGAGATCATTA
CTTCATCAAAACTAAACTAAATGAATAAAGGGAATGGATATACGTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAA

IP21379.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Try29F-RC 932 Try29F-RC 87..932 1..846 4230 100 Plus
etaTry-RA 911 etaTry-RA 590..656 599..665 200 86.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:51:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 8997532..8998377 1..846 4230 100 Plus
chr2R 21145070 chr2R 7228223..7228289 665..599 200 86.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:45:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8998623..8999469 1..847 4235 100 Plus
2R 25286936 2R 11340768..11340834 665..599 200 86.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8998623..8999469 1..847 4235 100 Plus
2R 25260384 2R 11341967..11342033 665..599 200 86.5 Minus
Blast to na_te.dros performed on 2019-03-16 16:51:43 has no hits.

IP21379.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:52:24 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 8997532..8998377 1..846 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:25:03 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RB 1..777 16..792 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:53:38 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 13..804 1..792 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:25:27 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 13..804 1..792 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:52:55 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RA 13..804 1..792 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:46:08 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 13..804 1..792 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:16:42 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RB 87..921 1..835 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:53:37 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 87..932 1..846 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:25:27 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 87..932 1..846 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:52:55 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RA 87..921 1..835 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:46:08 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
Try29F-RC 87..932 1..846 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:52:24 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8998623..8999468 1..846 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:52:24 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8998623..8999468 1..846 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:52:24 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8998623..8999468 1..846 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:25:27 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8998623..8999468 1..846 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:31:11 Download gff for IP21379.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8998623..8999468 1..846 100   Plus

IP21379.pep Sequence

Translation from 0 to 791

> IP21379.pep
IGLTGMAKTILHLFIGGILLVNLSLGATVRRPRLDGRIVGGQVANIKDIP
YQVSLQRSYHFCGGSLIAQGWVLTAAHCTEGSAILLSKVRIGSSRTSVGG
QLVGIKRVHRHPKFDAYTIDFDFSLLELEEYSAKNVTQAFVGLPEQDADI
ADGTPVLVSGWGNTQSAQETSAVLRSVTVPKVSQTQCTEAYGNFGSITDR
MLCAGLPEGGKDACQGDSGGPLAADGVLWGVVSWGYGCARPNYPGVYSRV
SAVRDWISSVSGI*

IP21379.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22696-PA 259 GF22696-PA 26..259 30..263 1116 88 Plus
Dana\GF14668-PA 279 GF14668-PA 47..279 32..263 678 53.6 Plus
Dana\GF16324-PA 250 GF16324-PA 4..246 10..259 478 42.5 Plus
Dana\GF12668-PA 287 GF12668-PA 6..272 14..262 447 42.1 Plus
Dana\GF15291-PA 246 GF15291-PA 2..239 13..257 433 41.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25325-PA 269 GG25325-PA 5..269 1..263 1308 94 Plus
Dere\GG24433-PA 277 GG24433-PA 45..277 32..263 670 53.6 Plus
Dere\GG11998-PA 252 GG11998-PA 23..248 33..260 449 43.1 Plus
Dere\GG17005-PA 268 GG17005-PA 6..262 7..257 430 37.9 Plus
Dere\GG20193-PA 273 GG20193-PA 22..259 23..259 422 41.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13258-PA 254 GH13258-PA 24..254 33..263 872 69.3 Plus
Dgri\GH13196-PA 276 GH13196-PA 43..276 31..263 689 54.7 Plus
Dgri\GH18287-PA 261 GH18287-PA 1..255 6..257 461 40.9 Plus
Dgri\GH22868-PA 268 GH22868-PA 18..266 23..262 454 42.9 Plus
Dgri\GH22928-PA 243 GH22928-PA 10..236 36..257 420 39.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:20
Subject Length Description Subject Range Query Range Score Percent Strand
Try29F-PD 267 CG9564-PD 5..267 1..263 1370 100 Plus
Try29F-PC 267 CG9564-PC 5..267 1..263 1370 100 Plus
CG31954-PA 277 CG31954-PA 45..277 32..263 667 54.5 Plus
gammaTry-PA 253 CG30028-PA 11..251 21..259 458 42.4 Plus
deltaTry-PA 253 CG12351-PA 11..251 21..259 458 42.4 Plus
CG30031-PA 253 CG30031-PA 11..251 21..259 458 42.4 Plus
CG30025-PA 253 CG30025-PA 11..249 21..257 456 42.4 Plus
betaTry-PB 253 CG18211-PB 11..249 21..257 454 42.8 Plus
betaTry-PA 253 CG18211-PA 11..249 21..257 454 42.8 Plus
alphaTry-PA 256 CG18444-PA 14..253 24..261 454 42.9 Plus
CG7829-PA 253 CG7829-PA 9..248 19..260 434 41.5 Plus
CG10405-PB 268 CG10405-PB 11..262 13..257 431 39.1 Plus
lambdaTry-PA 272 CG12350-PA 27..256 29..257 417 41.5 Plus
CG11192-PB 279 CG11192-PB 25..259 35..257 416 44.2 Plus
Ser8-PA 260 CG4812-PA 4..253 10..257 414 38.3 Plus
CG13430-PB 267 CG13430-PB 29..260 35..258 412 40.5 Plus
CG13430-PA 267 CG13430-PA 29..260 35..258 412 40.5 Plus
epsilonTry-PA 256 CG18681-PA 25..249 32..257 404 40.2 Plus
CG34458-PA 257 CG34458-PA 29..257 35..263 403 38.5 Plus
CG17571-PB 258 CG17571-PB 22..251 32..257 400 41.9 Plus
CG17571-PA 258 CG17571-PA 22..251 32..257 400 41.9 Plus
zetaTry-PA 280 CG12387-PA 36..276 35..260 392 40.3 Plus
etaTry-PA 262 CG12386-PA 8..255 18..258 389 39 Plus
CG32269-PB 332 CG32269-PB 104..328 33..260 388 38.1 Plus
CG32269-PA 332 CG32269-PA 104..328 33..260 388 38.1 Plus
CG8299-PA 260 CG8299-PA 1..252 11..257 386 39.8 Plus
thetaTry-PA 262 CG12385-PA 32..259 35..261 382 40.1 Plus
CG17239-PB 248 CG17239-PB 23..237 37..257 378 39.6 Plus
CG17239-PA 248 CG17239-PA 23..237 37..257 378 39.6 Plus
CG18735-PA 364 CG18735-PA 82..312 37..258 378 39.2 Plus
Sb-PB 787 CG4316-PB 536..782 28..257 377 38.8 Plus
Sb-PA 787 CG4316-PA 536..782 28..257 377 38.8 Plus
kappaTry-PC 263 CG12388-PC 23..253 35..257 376 39.6 Plus
CG3355-PA 314 CG3355-PA 75..302 37..257 371 41.7 Plus
CG33159-PA 257 CG33159-PA 25..243 37..254 369 38.7 Plus
iotaTry-PA 252 CG7754-PA 26..245 36..257 363 35.1 Plus
CG4613-PC 374 CG4613-PC 101..363 3..258 361 37.2 Plus
CG4613-PB 374 CG4613-PB 101..363 3..258 361 37.2 Plus
Np-PB 1041 CG34350-PB 790..1038 30..260 358 34.4 Plus
Np-PA 1041 CG34350-PA 790..1038 30..260 358 34.4 Plus
CG32271-PA 248 CG32271-PA 22..248 35..263 357 37.5 Plus
CG4386-PA 372 CG4386-PA 126..358 37..261 355 38.9 Plus
CG4914-PA 374 CG4914-PA 125..360 35..257 350 38.4 Plus
CG6041-PA 308 CG6041-PA 4..269 15..257 347 35.4 Plus
CG32374-PA 299 CG32374-PA 50..296 14..261 343 35.5 Plus
CG8172-PD 371 CG8172-PD 113..365 22..260 341 35.8 Plus
CG11836-PI 281 CG11836-PI 44..272 37..259 340 38.5 Plus
CG11836-PJ 333 CG11836-PJ 96..324 37..259 340 38.5 Plus
CG32808-PA 284 CG32808-PA 27..255 35..257 336 36.9 Plus
CG32755-PA 315 CG32755-PA 37..271 37..257 334 36.1 Plus
CG6865-PB 285 CG6865-PB 29..280 28..260 333 36.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17455-PA 260 GI17455-PA 30..260 33..263 859 66.2 Plus
Dmoj\GI17775-PA 275 GI17775-PA 41..275 30..263 685 54.9 Plus
Dmoj\GI17776-PA 280 GI17776-PA 43..280 32..263 647 52.5 Plus
Dmoj\GI23804-PA 269 GI23804-PA 32..269 32..263 638 53.8 Plus
Dmoj\GI23805-PA 280 GI23805-PA 35..280 25..263 618 49.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26238-PA 259 GL26238-PA 24..259 28..263 1052 82.2 Plus
Dper\GL19474-PA 274 GL19474-PA 15..274 13..263 686 50.8 Plus
Dper\GL22176-PA 257 GL22176-PA 1..251 6..257 434 38.8 Plus
Dper\GL16818-PA 287 GL16818-PA 13..272 18..262 434 42.8 Plus
Dper\GL17339-PA 256 GL17339-PA 6..253 18..261 430 42.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21879-PA 259 GA21879-PA 24..259 28..263 1057 82.2 Plus
Dpse\GA16585-PA 274 GA16585-PA 15..274 13..263 687 50.8 Plus
Dpse\GA11574-PA 269 GA11574-PA 11..253 13..257 442 41.1 Plus
Dpse\GA10299-PA 257 GA10299-PA 1..251 6..257 436 38.8 Plus
Dpse\GA14937-PA 256 GA14937-PA 6..253 18..261 430 42.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17347-PA 258 GM17347-PA 1..258 6..263 1325 98.1 Plus
Dsec\GM18144-PA 277 GM18144-PA 45..277 32..263 678 54.5 Plus
Dsec\GM12217-PA 294 GM12217-PA 64..289 33..260 445 44 Plus
Dsec\GM15158-PA 268 GM15158-PA 8..262 10..257 438 38.9 Plus
Dsec\GM21281-PA 272 GM21281-PA 8..256 10..257 436 40.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:46:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22751-PA 277 GD22751-PA 45..277 32..263 679 54.5 Plus
Dsim\GD19101-PA 268 GD19101-PA 8..262 10..257 434 39.5 Plus
Dsim\GD25281-PA 279 GD25281-PA 25..259 35..257 416 44.6 Plus
Dsim\GD10792-PA 272 GD10792-PA 8..256 10..257 415 39.5 Plus
Dsim\GD25272-PA 267 GD25272-PA 29..260 35..258 407 40.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:46:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14373-PA 263 GJ14373-PA 26..263 26..263 915 70.2 Plus
Dvir\GJ17600-PA 276 GJ17600-PA 42..276 30..263 703 56.2 Plus
Dvir\GJ10915-PA 261 GJ10915-PA 14..255 19..257 453 41.1 Plus
Dvir\GJ21494-PA 265 GJ21494-PA 7..249 17..257 442 40.5 Plus
Dvir\GJ20662-PA 275 GJ20662-PA 6..259 14..262 437 41 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23995-PA 290 GK23995-PA 23..258 28..263 958 74.2 Plus
Dwil\GK14673-PA 280 GK14673-PA 47..280 31..263 684 54.3 Plus
Dwil\GK22079-PA 257 GK22079-PA 8..247 20..259 453 41.5 Plus
Dwil\GK21995-PA 256 GK21995-PA 25..253 32..261 426 42.1 Plus
Dwil\GK20985-PA 268 GK20985-PA 1..263 10..260 417 39.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:46:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18820-PA 258 GE18820-PA 1..258 6..263 1316 96.9 Plus
Dyak\GE14855-PA 277 GE14855-PA 45..277 32..263 672 53.6 Plus
Dyak\GE10423-PA 253 GE10423-PA 18..249 27..260 445 42.4 Plus
Dyak\GE24397-PA 268 GE24397-PA 11..262 13..257 442 39.4 Plus
Dyak\GE12880-PA 272 GE12880-PA 4..256 10..257 426 40.4 Plus

IP21379.hyp Sequence

Translation from 0 to 791

> IP21379.hyp
IGLTGMAKTILHLFIGGILLVNLSLGATVRRPRLDGRIVGGQVANIKDIP
YQVSLQRSYHFCGGSLIAQGWVLTAAHCTEGSAILLSKVRIGSSRTSVGG
QLVGIKRVHRHPKFDAYTIDFDFSLLELEEYSAKNVTQAFVGLPEQDADI
ADGTPVLVSGWGNTQSAQETSAVLRSVTVPKVSQTQCTEAYGNFGSITDR
MLCAGLPEGGKDACQGDSGGPLAADGVLWGVVSWGYGCARPNYPGVYSRV
SAVRDWISSVSGI*

IP21379.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Try29F-PD 267 CG9564-PD 5..267 1..263 1370 100 Plus
Try29F-PC 267 CG9564-PC 5..267 1..263 1370 100 Plus
CG31954-PA 277 CG31954-PA 45..277 32..263 667 54.5 Plus
gammaTry-PA 253 CG30028-PA 11..251 21..259 458 42.4 Plus
deltaTry-PA 253 CG12351-PA 11..251 21..259 458 42.4 Plus