Clone IP21415 Report

Search the DGRC for IP21415

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:214
Well:15
Vector:pOT2
Associated Gene/TranscriptCG13312-RA
Protein status:IP21415.pep: gold
Sequenced Size:1087

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13312 2008-05-05 Release 5.5 slip selected
CG13312 2008-08-15 Release 5.9 accounting
CG13312 2008-12-18 5.12 accounting

Clone Sequence Records

IP21415.complete Sequence

1087 bp assembled on 2008-05-22

GenBank Submission: BT032978

> IP21415.complete
CAATTGCAACCCGAAATGTCGCCTAACCGTGTTTGCTTGCCACTTGGCCT
GCCGCTGTTGCTTTTCCTGCTCGGTTGCCTTGTGTCCTCGACTCATGGCA
CCTGCAACGTCTGCAACACCGTCAACAATCTGACCTGCTACTCCTCGACC
CAGATGCAGTCCTGCCAGGTGGACGTCCTGTCCACGGCCACGCCCACCGA
TTGCCCCAGCGGCTATGTCTGCGTCAGCGGCTCCAGCGGTGTGCTCTGCC
AGCCGGAGGACTCGGCATCTGACAGTCAGGCGGACTGCCAGGAGTGCAAC
AAGTGCGATGAGACCCAGACGTTCGCCTGCACCGGAACCCAGAGCTTCGC
CCTCTGCCTGGGCACAGATACCGTCCAGGATTCGGTGGGCACCTGTGCCT
CCGGTTATGTGTGCAACATCAACGACACCCAGATATGCGGTCTGCCAGCG
GATGGGGTGATGCCGACCTGTTCGTATAGCGATGACTCAACCACAACCAC
GGTGAGCAGCACCACCAGCTCCACCACAGCGGCACCACCTTCCACCAGCT
CGGCATCCACTTACTGTGCGGCGGTTCAGTCGCAGGGAAAATACGCGGTC
GGATATAACGCGTATACGACCTGTCGCCAGTATATCTACTGCACTTTGGT
TGACGGAAGTTGGATTGGCCAGACCTACACTTGTCCGGGATCCATGTACT
TCGATAGTGCCTCCGAGATGTGTGTGTCCACCATGCCATCCACCTGTTCC
ACAACTGCAACAACGAGTTCCACGACGACTGCGGCACCCACGACCAGTAA
TCCGGAGGCATATTGCCAGGCGATGCAGTCGGCGGGCTACTACCCGGTGG
GTACGGATGCCAGCACCACGTGTCATCAGTACATCGACTGTTTTCTGAAC
GGAGGCACTTGGGGTGGCAATATGTACACATGTCCCGGTAGCCTCTACTA
CAACAGTGCCAGCAGAACATGTGTCTCCACCTTACCATCCACATGCTCCA
CCACAGTGGCCAGTTTAACCCTCAATGGAGTGGTTTTAGATTAAAAAAGG
AATCTCTATGCAAAAAAAAAAAAAAAAAAAAAAAAAA

IP21415.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG13312-RA 1119 CG13312-RA 59..1119 1..1061 5305 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:04:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8797754..8798359 1061..456 2895 98.5 Minus
chr3L 24539361 chr3L 8798699..8799156 458..1 2275 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:45:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:04:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8805808..8806416 1064..456 3045 100 Minus
3L 28110227 3L 8806756..8807213 458..1 2290 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8798908..8799516 1064..456 3045 100 Minus
3L 28103327 3L 8799856..8800313 458..1 2290 100 Minus
Blast to na_te.dros performed 2019-03-16 09:04:34
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 883..936 103..49 128 72.7 Minus
TART-A 13424 TART-A 13424bp 12061..12114 103..49 128 72.7 Minus

IP21415.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:05:31 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8797754..8798358 457..1061 98 <- Minus
chr3L 8798701..8799156 1..456 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:25:19 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:38:32 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:00:01 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:44:22 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:58:28 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:07:50 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:38:32 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1061 1..1061 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:00:01 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1061 1..1061 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:44:22 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1029 16..1044 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:58:28 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
CG13312-RA 1..1061 1..1061 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:31 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8805811..8806415 457..1061 100 <- Minus
3L 8806758..8807213 1..456 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:31 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8805811..8806415 457..1061 100 <- Minus
3L 8806758..8807213 1..456 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:31 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8805811..8806415 457..1061 100 <- Minus
3L 8806758..8807213 1..456 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:00:01 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8798911..8799515 457..1061 100 <- Minus
arm_3L 8799858..8800313 1..456 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:21:07 Download gff for IP21415.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8798911..8799515 457..1061 100 <- Minus
3L 8799858..8800313 1..456 100   Minus

IP21415.pep Sequence

Translation from 0 to 1043

> IP21415.pep
QLQPEMSPNRVCLPLGLPLLLFLLGCLVSSTHGTCNVCNTVNNLTCYSST
QMQSCQVDVLSTATPTDCPSGYVCVSGSSGVLCQPEDSASDSQADCQECN
KCDETQTFACTGTQSFALCLGTDTVQDSVGTCASGYVCNINDTQICGLPA
DGVMPTCSYSDDSTTTTVSSTTSSTTAAPPSTSSASTYCAAVQSQGKYAV
GYNAYTTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCS
TTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDASTTCHQYIDCFLN
GGTWGGNMYTCPGSLYYNSASRTCVSTLPSTCSTTVASLTLNGVVLD*

IP21415.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:55:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10144-PA 335 GF10144-PA 1..335 6..347 1079 71.1 Plus
Dana\GF24358-PA 233 GF24358-PA 17..222 27..250 354 36.6 Plus
Dana\GF24359-PA 230 GF24359-PA 2..202 17..236 302 39.1 Plus
Dana\GF24358-PA 233 GF24358-PA 121..230 240..341 196 41.8 Plus
Dana\GF20076-PA 169 GF20076-PA 5..143 17..163 192 36.1 Plus
Dana\GF24359-PA 230 GF24359-PA 110..229 227..346 170 37.4 Plus
Dana\GF10119-PA 1575 GF10119-PA 1385..1516 99..249 162 30.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:55:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15055-PA 344 GG15055-PA 1..344 6..347 1300 89.5 Plus
Dere\GG14351-PA 230 GG14351-PA 3..219 11..250 357 37.9 Plus
Dere\GG14353-PA 229 GG14353-PA 2..219 17..254 339 38.3 Plus
Dere\GG14350-PA 209 GG14350-PA 5..209 17..250 222 27.7 Plus
Dere\GG14351-PA 230 GG14351-PA 154..227 268..341 208 50 Plus
Dere\GG14353-PA 229 GG14353-PA 146..228 264..346 196 45.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:55:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16136-PA 333 GH16136-PA 19..332 28..346 833 57.1 Plus
Dgri\GH15330-PA 234 GH15330-PA 19..219 32..249 323 36 Plus
Dgri\GH15330-PA 234 GH15330-PA 132..233 245..346 200 35.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13312-PA 342 CG13312-PA 1..342 6..347 1859 100 Plus
CG13308-PB 233 CG13308-PB 6..231 11..260 460 39.2 Plus
CG13309-PA 229 CG13309-PA 4..219 20..254 427 38 Plus
CG32024-PA 209 CG32024-PA 9..209 21..250 289 28.4 Plus
CG13309-PA 229 CG13309-PA 19..228 99..346 285 30.3 Plus
CG13308-PB 233 CG13308-PB 24..230 98..341 275 29.5 Plus
CG34426-PA 296 CG34426-PA 1..293 19..335 272 28.1 Plus
CG13075-PB 339 CG13075-PB 7..275 20..270 241 27.5 Plus
CG34427-PB 269 CG34427-PB 12..268 19..249 216 26.5 Plus
CG42525-PB 377 CG42525-PB 101..377 39..332 216 25 Plus
CG42525-PA 419 CG42525-PA 143..419 39..332 216 25 Plus
CG42494-PC 283 CG42494-PC 19..283 99..333 199 24.7 Plus
CG42494-PB 283 CG42494-PB 19..283 99..333 199 24.7 Plus
CG42494-PA 283 CG42494-PA 19..283 99..333 199 24.7 Plus
CG33258-PC 252 CG33258-PC 23..252 35..250 195 25.1 Plus
CG33258-PB 252 CG33258-PB 23..252 35..250 195 25.1 Plus
CG34427-PB 269 CG34427-PB 27..268 98..332 184 28.4 Plus
CG13075-PB 339 CG13075-PB 21..254 97..335 178 25 Plus
Muc96D-PA 881 CG31439-PA 305..615 29..340 173 21.1 Plus
CG14958-PA 145 CG14958-PA 11..131 15..146 165 30.3 Plus
CG32024-PA 209 CG32024-PA 22..209 98..333 153 23.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12405-PA 343 GI12405-PA 12..343 21..347 824 55.5 Plus
Dmoj\GI12935-PA 216 GI12935-PA 17..213 32..251 323 36.9 Plus
Dmoj\GI12932-PA 230 GI12932-PA 4..217 17..241 202 30.7 Plus
Dmoj\GI12935-PA 216 GI12935-PA 150..213 271..334 170 45.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:55:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10277-PA 181 GL10277-PA 1..181 154..347 479 63.4 Plus
Dper\GL10346-PA 231 GL10346-PA 19..224 35..257 308 35.7 Plus
Dper\GL10345-PA 237 GL10345-PA 2..230 17..257 278 33.1 Plus
Dper\GL10346-PA 231 GL10346-PA 129..230 243..346 199 38.5 Plus
Dper\GL10345-PA 237 GL10345-PA 117..236 239..346 178 36.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:55:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12193-PA 330 GA12193-PA 4..330 19..347 1031 69.7 Plus
Dpse\GA12189-PA 231 GA12189-PA 19..224 35..257 305 35.3 Plus
Dpse\GA12188-PA 237 GA12188-PA 6..230 11..257 283 32.9 Plus
Dpse\GA12189-PA 231 GA12189-PA 129..230 243..346 200 38.5 Plus
Dpse\GA12188-PA 237 GA12188-PA 117..236 239..346 178 36.7 Plus
Dpse\GA23595-PA 576 GA23595-PA 7..268 20..264 154 25.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24912-PA 342 GM24912-PA 1..342 6..347 1346 95.3 Plus
Dsec\GM25097-PA 229 GM25097-PA 4..219 20..254 329 37.8 Plus
Dsec\GM25097-PA 229 GM25097-PA 128..228 243..346 202 44.2 Plus
Dsec\GM25095-PA 168 GM25095-PA 5..141 17..159 170 31.9 Plus
Dsec\GM25096-PA 118 GM25096-PA 6..117 11..133 155 36.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12959-PA 342 GD12959-PA 1..342 6..347 1673 96.8 Plus
Dsim\GD14130-PA 225 GD14130-PA 6..216 11..241 342 37.6 Plus
Dsim\GD14131-PA 229 GD14131-PA 4..219 20..254 329 37.8 Plus
Dsim\GD14131-PA 229 GD14131-PA 128..228 243..346 201 44.2 Plus
Dsim\GD14129-PA 168 GD14129-PA 5..141 17..159 176 33.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12295-PA 362 GJ12295-PA 6..362 15..347 876 55.7 Plus
Dvir\GJ13076-PA 239 GJ13076-PA 14..225 28..255 364 38.2 Plus
Dvir\GJ13075-PA 245 GJ13075-PA 8..240 19..246 181 29.1 Plus
Dvir\GJ13076-PA 239 GJ13076-PA 134..225 247..338 173 35.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17466-PA 337 GK17466-PA 11..337 21..346 1025 68 Plus
Dwil\GK16742-PA 234 GK16742-PA 11..223 20..253 315 32.6 Plus
Dwil\GK16742-PA 234 GK16742-PA 150..223 263..336 202 48.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21279-PA 345 GE21279-PA 1..345 6..347 1320 91.3 Plus
Dyak\GE20784-PA 232 GE20784-PA 11..230 16..259 362 39.3 Plus
Dyak\GE20785-PA 229 GE20785-PA 16..219 32..254 321 38.7 Plus
Dyak\GE20783-PA 209 GE20783-PA 5..209 17..250 243 29.7 Plus
Dyak\GE20784-PA 232 GE20784-PA 152..229 264..341 219 51.3 Plus
Dyak\GE20785-PA 229 GE20785-PA 146..228 264..346 195 45.8 Plus

IP21415.hyp Sequence

Translation from 0 to 1043

> IP21415.hyp
QLQPEMSPNRVCLPLGLPLLLFLLGCLVSSTHGTCNVCNTVNNLTCYSST
QMQSCQVDVLSTATPTDCPSGYVCVSGSSGVLCQPEDSASDSQADCQECN
KCDETQTFACTGTQSFALCLGTDTVQDSVGTCASGYVCNINDTQICGLPA
DGVMPTCSYSDDSTTTTVSSTTSSTTAAPPSTSSASTYCAAVQSQGKYAV
GYNAYTTCRQYIYCTLVDGSWIGQTYTCPGSMYFDSASEMCVSTMPSTCS
TTATTSSTTTAAPTTSNPEAYCQAMQSAGYYPVGTDASTTCHQYIDCFLN
GGTWGGNMYTCPGSLYYNSASRTCVSTLPSTCSTTVASLTLNGVVLD*

IP21415.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:21:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13312-PA 342 CG13312-PA 1..342 6..347 1859 100 Plus
CG13308-PB 233 CG13308-PB 6..231 11..260 460 39.2 Plus
CG13309-PA 229 CG13309-PA 4..219 20..254 427 38 Plus
CG32024-PA 209 CG32024-PA 9..209 21..250 289 28.4 Plus
CG13309-PA 229 CG13309-PA 19..228 99..346 285 30.3 Plus
CG13308-PB 233 CG13308-PB 24..230 98..341 275 29.5 Plus
CG34426-PA 296 CG34426-PA 1..293 19..335 272 28.1 Plus
CG32024-PA 209 CG32024-PA 22..209 98..333 153 23.7 Plus