Clone IP21419 Report

Search the DGRC for IP21419

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:214
Well:19
Vector:pOT2
Associated Gene/TranscriptBG642163-RA
Protein status:IP21419.pep: gold
Sequenced Size:1413

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
BG642163 2008-05-05 Release 5.5 slip selected
BG642163 2008-08-15 Release 5.9 accounting
BG642163 2008-12-18 5.12 accounting

Clone Sequence Records

IP21419.complete Sequence

1413 bp assembled on 2008-05-27

GenBank Submission: BT032979

> IP21419.complete
AAAAGCCCCCACACAAAATGTGGAAGTGGATAATCAATATCATATTATTA
TCAGTGGTGCAAGCCAGCAAAAAAGTCGATGGACAAATATCTCCAAGAAC
AACTTCCCAAAAAATACTTCAACCGTATCCGTGTAACTCCCCACATCCAC
TAACCCAATTTTCCCAAAAGTATCCAAACTCAGGATACCTTTGTTATCCT
CAAAATGAAATTAATAAATACCTATGGTACCCACCGTGGAGCCAATGGGT
AGGATATCAAGGATATCAAACAGGAAATGGATTATATGCACAACTTTCGA
CGGGATCTCAGATTTCATCCTTCCACCATCCCAACTTTCAAATTCCTTTT
GTTCAACTTCTCACTTTACCCGCCCCACCAAGCTTAATCCCACCTGCCTC
TCCCATTCCTTCCCACCAATATCCAGGATTATTTGCGCCACCATCTTTCG
CCCAATTTCCAGGATTACTGGGATCAACGGGCTCGGGTCCATCGGGAATA
CCAAATCTTCCCGGGACAAATGCCTCTCCAGGTTGGAGTTCACCTGGATC
TTCGATTCCTTCCTACCAACTGCCAGGAATACAACAGCAACCAGGCTCAA
GTCCAGTAGAATATCCACATGCTCCTATCAAACCTCCAAGTTCCGCCCCG
GCAGGTTGGAGCTCACCAGGATCACCTATTCCTCCCCCTTCACTACCAGG
ACTACCGGGAACACCAGATCAGAATCCATGGGGATCTGCTGATCGTCCCG
CCCATCCTCCGGCATCGCCCATACAACCAGGTTGGAGTCCACCAGGATCA
TCTTTTCCTCCCTCTCCCCAATCAGGACCACCGGGACCACCAAATTGGAA
TCAATTGGAGTCTGCCAATCGTCCTGTCTATCCTCCGGAAATGCCCATAC
CTCCAGTTTGGAATTCGCGTAGATCTTCGAATCCTTCCGCCCAACTTCCA
CCATTACAAGAGGCACCCTTGGGATCTCTTGGACCCTCCCAACTACCTCC
AGGGCTACCAGCGCCACCTAGCTGGAGTTCATTGGAATCTTCAAATCCTC
TTGTCCAACGTCCAGAATTAATGGCACCACCAAGTTTGAGTCCATCTGGA
TCTTCGAATTCTGTCCTTCAGCCCTTGCCCGCAAAACCAAATTGGCGTTC
ATCGGGATCCCCGAATTCGCCTCTTTACCCTCCAGGATTACCCGCACCAC
CAAGTGAGAGTATACCTGATATCTCCCCAAATCAGAAAACACGATCCGCC
GGATCACCGCCATAGGTGAATACAAACAATCTAGAGGTAGAAAACAACTG
TGCCACCAATGAAAAACAGCTATTGAGTTAAGTAACAAAATAGCAACAAG
CAAAAATATGTATTTAAAAATATATGTGGCATTAAAAAAAATATAAAAAA
AAAAAAAAAAAAA

IP21419.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
BG642163-RA 1485 BG642163-RA 18..1422 1..1405 7010 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4640573..4641871 96..1394 6345 99.2 Plus
chr2L 23010047 chr2L 4640420..4640514 1..95 475 100 Plus
chr2L 23010047 chr2L 4641129..4641263 778..912 240 78.5 Plus
chr2L 23010047 chr2L 4641255..4641389 652..786 240 78.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:45:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4641449..4642758 96..1405 6535 99.9 Plus
2L 23513712 2L 4641296..4641390 1..95 475 100 Plus
2L 23513712 2L 4642005..4642139 778..912 240 78.5 Plus
2L 23513712 2L 4642131..4642265 652..786 240 78.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4641449..4642758 96..1405 6535 99.9 Plus
2L 23513712 2L 4641296..4641390 1..95 475 100 Plus
Blast to na_te.dros performed on 2019-03-15 23:13:10 has no hits.

IP21419.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:13:51 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4640420..4640514 1..95 100 -> Plus
chr2L 4640573..4641852 96..1375 99 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:25:25 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:40:10 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:32:36 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:46:24 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:24:03 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:09:57 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1394 1..1394 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:40:10 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1394 1..1394 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:32:36 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1394 1..1394 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:46:24 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1248 18..1265 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:24:03 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
BG642163-RA 1..1394 1..1394 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:51 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4641296..4641390 1..95 100 -> Plus
2L 4641449..4642747 96..1394 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:51 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4641296..4641390 1..95 100 -> Plus
2L 4641449..4642747 96..1394 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:13:51 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4641296..4641390 1..95 100 -> Plus
2L 4641449..4642747 96..1394 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:32:36 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4641296..4641390 1..95 100 -> Plus
arm_2L 4641449..4642747 96..1394 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:12 Download gff for IP21419.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4641449..4642747 96..1394 100   Plus
2L 4641296..4641390 1..95 100 -> Plus

IP21419.hyp Sequence

Translation from 2 to 1264

> IP21419.hyp
KPPHKMWKWIINIILLSVVQASKKVDGQISPRTTSQKILQPYPCNSPHPL
TQFSQKYPNSGYLCYPQNEINKYLWYPPWSQWVGYQGYQTGNGLYAQLST
GSQISSFHHPNFQIPFVQLLTLPAPPSLIPPASPIPSHQYPGLFAPPSFA
QFPGLLGSTGSGPSGIPNLPGTNASPGWSSPGSSIPSYQLPGIQQQPGSS
PVEYPHAPIKPPSSAPAGWSSPGSPIPPPSLPGLPGTPDQNPWGSADRPA
HPPASPIQPGWSPPGSSFPPSPQSGPPGPPNWNQLESANRPVYPPEMPIP
PVWNSRRSSNPSAQLPPLQEAPLGSLGPSQLPPGLPAPPSWSSLESSNPL
VQRPELMAPPSLSPSGSSNSVLQPLPAKPNWRSSGSPNSPLYPPGLPAPP
SESIPDISPNQKTRSAGSPP*

IP21419.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
BG642163-PB 415 CG34102-PB 1..415 6..420 2309 100 Plus
BG642163-PA 415 CG34102-PA 1..415 6..420 2309 100 Plus
CG15635-PB 1136 CG15635-PB 707..1065 54..420 249 28.7 Plus
CG15021-PA 420 CG15021-PA 46..383 90..419 242 29.1 Plus
CG15635-PB 1136 CG15635-PB 635..1000 43..420 228 28.1 Plus
CG15635-PB 1136 CG15635-PB 130..534 45..420 224 29.2 Plus
CG15635-PB 1136 CG15635-PB 421..736 76..420 224 27.9 Plus
Muc91C-PB 949 CG7709-PB 118..408 123..420 218 32.3 Plus
CG15635-PB 1136 CG15635-PB 85..469 120..420 199 27.6 Plus
CG15635-PB 1136 CG15635-PB 796..1120 27..379 176 26.3 Plus
CG15635-PB 1136 CG15635-PB 47..351 186..420 170 28 Plus
CG15635-PB 1136 CG15635-PB 33..261 200..420 164 30 Plus
CG15635-PB 1136 CG15635-PB 891..1126 27..283 156 29.4 Plus

IP21419.pep Sequence

Translation from 2 to 1264

> IP21419.pep
KPPHKMWKWIINIILLSVVQASKKVDGQISPRTTSQKILQPYPCNSPHPL
TQFSQKYPNSGYLCYPQNEINKYLWYPPWSQWVGYQGYQTGNGLYAQLST
GSQISSFHHPNFQIPFVQLLTLPAPPSLIPPASPIPSHQYPGLFAPPSFA
QFPGLLGSTGSGPSGIPNLPGTNASPGWSSPGSSIPSYQLPGIQQQPGSS
PVEYPHAPIKPPSSAPAGWSSPGSPIPPPSLPGLPGTPDQNPWGSADRPA
HPPASPIQPGWSPPGSSFPPSPQSGPPGPPNWNQLESANRPVYPPEMPIP
PVWNSRRSSNPSAQLPPLQEAPLGSLGPSQLPPGLPAPPSWSSLESSNPL
VQRPELMAPPSLSPSGSSNSVLQPLPAKPNWRSSGSPNSPLYPPGLPAPP
SESIPDISPNQKTRSAGSPP*

IP21419.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
BG642163-PB 415 CG34102-PB 1..415 6..420 2309 100 Plus
BG642163-PA 415 CG34102-PA 1..415 6..420 2309 100 Plus
CG15635-PB 1136 CG15635-PB 707..1065 54..420 249 28.7 Plus
CG15021-PA 420 CG15021-PA 46..383 90..419 242 29.1 Plus
CG15635-PB 1136 CG15635-PB 635..1000 43..420 228 28.1 Plus
CG15635-PB 1136 CG15635-PB 130..534 45..420 224 29.2 Plus
CG15635-PB 1136 CG15635-PB 421..736 76..420 224 27.9 Plus
Muc91C-PB 949 CG7709-PB 118..408 123..420 218 32.3 Plus
Muc91C-PA 950 CG7709-PA 119..409 123..420 218 32.3 Plus
RpII215-PA 1887 CG1554-PA 1500..1803 126..419 218 27.4 Plus
RpII215-PA 1887 CG1554-PA 1563..1881 126..413 209 27.9 Plus
Muc91C-PB 949 CG7709-PB 241..523 124..417 206 33 Plus
Muc91C-PA 950 CG7709-PA 242..524 124..417 206 33 Plus
CG15635-PB 1136 CG15635-PB 85..469 120..420 199 27.6 Plus
Muc91C-PB 949 CG7709-PB 177..448 130..420 199 31.7 Plus
Muc91C-PA 950 CG7709-PA 178..449 130..420 199 31.7 Plus
osa-PE 2555 CG7467-PE 365..656 125..411 195 27.9 Plus
osa-PC 2556 CG7467-PC 365..656 125..411 195 27.9 Plus
osa-PF 2559 CG7467-PF 365..656 125..411 195 27.9 Plus
osa-PA 2703 CG7467-PA 365..656 125..411 195 27.9 Plus
osa-PB 2716 CG7467-PB 365..656 125..411 195 27.9 Plus
osa-PD 2716 CG7467-PD 365..656 125..411 195 27.9 Plus
frm-PJ 752 CG10625-PJ 129..400 131..399 194 29.4 Plus
frm-PI 766 CG10625-PI 129..400 131..399 194 29.4 Plus
frm-PH 1180 CG10625-PH 543..814 131..399 194 29.4 Plus
Vml-PB 578 CG34333-PB 87..386 110..405 190 27.3 Plus
Vml-PA 578 CG34333-PA 87..386 110..405 190 27.3 Plus
Muc91C-PB 949 CG7709-PB 345..640 123..419 188 30.1 Plus
Muc91C-PA 950 CG7709-PA 346..641 123..419 188 30.1 Plus
Vml-PB 578 CG34333-PB 183..465 110..418 186 28.2 Plus
Vml-PA 578 CG34333-PA 183..465 110..418 186 28.2 Plus
Vml-PB 578 CG34333-PB 85..330 174..405 185 29.2 Plus
Vml-PA 578 CG34333-PA 85..330 174..405 185 29.2 Plus
Sec24CD-PA 1193 CG10882-PA 106..393 124..405 185 27.7 Plus
Sec24CD-PB 1193 CG10882-PB 106..393 124..405 185 27.7 Plus
Sec24CD-PC 1231 CG10882-PC 106..393 124..405 185 27.7 Plus
osa-PE 2555 CG7467-PE 1160..1532 42..404 184 25.3 Plus
osa-PC 2556 CG7467-PC 1161..1533 42..404 184 25.3 Plus
osa-PF 2559 CG7467-PF 1164..1536 42..404 184 25.3 Plus
dpy-PY 18095 CG33196-PY 14181..14501 119..407 183 28.1 Plus
dpy-PS 18641 CG33196-PS 14727..15047 119..407 183 28.1 Plus
dpy-PV 20404 CG33196-PV 16490..16810 119..407 183 28.1 Plus
dpy-PP 20710 CG33196-PP 16796..17116 119..407 183 28.1 Plus
dpy-PU 21657 CG33196-PU 17743..18063 119..407 183 28.1 Plus
dpy-PT 22300 CG33196-PT 18386..18706 119..407 183 28.1 Plus
dpy-PO 22743 CG33196-PO 18829..19149 119..407 183 28.1 Plus
dpy-PR 22830 CG33196-PR 18916..19236 119..407 183 28.1 Plus
dpy-PQ 22949 CG33196-PQ 19035..19355 119..407 183 28.1 Plus
osa-PE 2555 CG7467-PE 224..526 130..420 181 25.3 Plus
osa-PC 2556 CG7467-PC 224..526 130..420 181 25.3 Plus
osa-PF 2559 CG7467-PF 224..526 130..420 181 25.3 Plus
osa-PA 2703 CG7467-PA 224..526 130..420 181 25.3 Plus
osa-PB 2716 CG7467-PB 224..526 130..420 181 25.3 Plus
osa-PD 2716 CG7467-PD 224..526 130..420 181 25.3 Plus
CG13731-PB 792 CG13731-PB 112..426 125..420 179 25.9 Plus
Sec24CD-PA 1193 CG10882-PA 104..456 40..318 178 28.2 Plus
Sec24CD-PB 1193 CG10882-PB 104..456 40..318 178 28.2 Plus
Sec24CD-PC 1231 CG10882-PC 104..456 40..318 178 28.2 Plus
CG15635-PB 1136 CG15635-PB 796..1120 27..379 176 26.3 Plus
osa-PA 2703 CG7467-PA 1247..1680 41..404 176 25.4 Plus
osa-PB 2716 CG7467-PB 1260..1693 41..404 176 25.4 Plus
osa-PD 2716 CG7467-PD 1260..1693 41..404 176 25.4 Plus
dpy-PY 18095 CG33196-PY 14007..14337 119..420 174 26.9 Plus
dpy-PS 18641 CG33196-PS 14553..14883 119..420 174 26.9 Plus
dpy-PV 20404 CG33196-PV 16316..16646 119..420 174 26.9 Plus
dpy-PP 20710 CG33196-PP 16622..16952 119..420 174 26.9 Plus
dpy-PU 21657 CG33196-PU 17569..17899 119..420 174 26.9 Plus
dpy-PT 22300 CG33196-PT 18212..18542 119..420 174 26.9 Plus
dpy-PO 22743 CG33196-PO 18655..18985 119..420 174 26.9 Plus
dpy-PR 22830 CG33196-PR 18742..19072 119..420 174 26.9 Plus
dpy-PQ 22949 CG33196-PQ 18861..19191 119..420 174 26.9 Plus
CG13731-PB 792 CG13731-PB 335..637 115..420 173 26.2 Plus
pico-PD 1034 CG11940-PD 664..898 199..420 173 27.7 Plus
pico-PB 1034 CG11940-PB 664..898 199..420 173 27.7 Plus
pico-PC 1113 CG11940-PC 743..977 199..420 173 27.7 Plus
pico-PA 1162 CG11940-PA 792..1026 199..420 173 27.7 Plus
CG15635-PB 1136 CG15635-PB 47..351 186..420 170 28 Plus
Muc91C-PB 949 CG7709-PB 513..850 77..418 170 28.4 Plus
Muc91C-PA 950 CG7709-PA 514..851 77..418 170 28.4 Plus
dpy-PY 18095 CG33196-PY 13937..14198 119..400 169 28.4 Plus
dpy-PS 18641 CG33196-PS 14483..14744 119..400 169 28.4 Plus
dpy-PV 20404 CG33196-PV 16246..16507 119..400 169 28.4 Plus
dpy-PP 20710 CG33196-PP 16552..16813 119..400 169 28.4 Plus
dpy-PU 21657 CG33196-PU 17499..17760 119..400 169 28.4 Plus
dpy-PT 22300 CG33196-PT 18142..18403 119..400 169 28.4 Plus
dpy-PO 22743 CG33196-PO 18585..18846 119..400 169 28.4 Plus
dpy-PR 22830 CG33196-PR 18672..18933 119..400 169 28.4 Plus
dpy-PQ 22949 CG33196-PQ 18791..19052 119..400 169 28.4 Plus
CG13722-PB 708 CG13722-PB 262..572 123..420 169 26.2 Plus
CG7016-PA 362 CG7016-PA 99..311 141..340 168 28.1 Plus
CG13731-PB 792 CG13731-PB 63..323 125..420 166 24.7 Plus
CG15635-PB 1136 CG15635-PB 33..261 200..420 164 30 Plus
frm-PD 268 CG10625-PD 129..264 131..276 164 36.7 Plus
frm-PA 268 CG10625-PA 129..264 131..276 164 36.7 Plus
frm-PE 652 CG10625-PE 513..648 131..276 164 36.7 Plus
frm-PB 682 CG10625-PB 543..678 131..276 164 36.7 Plus
frm-PC 682 CG10625-PC 543..678 131..276 164 36.7 Plus
CG9411-PA 993 CG9411-PA 351..670 157..420 164 27.1 Plus
Muc11A-PB 1552 CG32656-PB 1150..1410 124..389 164 29 Plus
frm-PE 652 CG10625-PE 435..645 92..337 163 30.4 Plus
CG13722-PB 708 CG13722-PB 410..671 121..420 162 25.2 Plus
RpII215-PA 1887 CG1554-PA 1660..1885 90..347 161 29.2 Plus
CG9425-PD 2103 CG9425-PD 1291..1586 136..419 160 25.8 Plus
CG9425-PC 2103 CG9425-PC 1291..1586 136..419 160 25.8 Plus
CG9425-PB 2103 CG9425-PB 1291..1586 136..419 160 25.8 Plus
Bap111-PA 749 CG7055-PA 506..748 121..416 159 25.8 Plus
Bap111-PA 749 CG7055-PA 516..737 113..338 159 29.2 Plus
osa-PE 2555 CG7467-PE 120..452 123..420 158 26.1 Plus
osa-PE 2555 CG7467-PE 593..830 126..360 158 26.4 Plus
osa-PC 2556 CG7467-PC 120..452 123..420 158 26.1 Plus
osa-PC 2556 CG7467-PC 593..830 126..360 158 26.4 Plus
osa-PF 2559 CG7467-PF 593..830 126..360 158 26.4 Plus
osa-PF 2559 CG7467-PF 120..452 123..420 158 26.1 Plus
osa-PA 2703 CG7467-PA 120..452 123..420 158 26.1 Plus
osa-PA 2703 CG7467-PA 593..830 126..360 158 26.4 Plus
osa-PB 2716 CG7467-PB 120..452 123..420 158 26.1 Plus
osa-PB 2716 CG7467-PB 593..830 126..360 158 26.4 Plus
osa-PD 2716 CG7467-PD 120..452 123..420 158 26.1 Plus
osa-PD 2716 CG7467-PD 593..830 126..360 158 26.4 Plus
Muc11A-PB 1552 CG32656-PB 414..689 123..419 157 28.2 Plus
CG15635-PB 1136 CG15635-PB 891..1126 27..283 156 29.4 Plus
CG13722-PB 708 CG13722-PB 59..406 105..420 156 23.5 Plus
CG9425-PD 2103 CG9425-PD 1365..1628 153..410 156 28.3 Plus
CG9425-PC 2103 CG9425-PC 1365..1628 153..410 156 28.3 Plus
CG9425-PB 2103 CG9425-PB 1365..1628 153..410 156 28.3 Plus
CG13731-PB 792 CG13731-PB 27..233 172..400 155 26.6 Plus
frm-PD 268 CG10625-PD 113..261 157..337 153 33.3 Plus
frm-PA 268 CG10625-PA 113..261 157..337 153 33.3 Plus