Clone IP21637 Report

Search the DGRC for IP21637

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:216
Well:37
Vector:pOT2
Associated Gene/TranscriptCG13332-RA
Protein status:IP21637.pep: gold
Sequenced Size:1091

Clone Sequence Records

IP21637.complete Sequence

1091 bp assembled on 2009-09-15

GenBank Submission: BT088805.1

> IP21637.complete
GCAGGTTCTCGCGGCGACTGGAGTTCCACTTTTCCCCATTGTTGGCCACC
TAACGAGCAAAGTTTTTTCACGGCACACATTAATTTTCCGGCCATTAGTG
GCATGTCCACCGACGAGGATTCCCTGGGCAGTCCCCTCAAGCCGGCCACG
CCCACACCCGGCGAGCGCGAACCGACGCGAGAACGCCATCGAGGCGGTCG
ATCTGGAGCCTCGGATCTGCTGCGCCATCAGCAGAGCTTTGAGGCTCGCT
ACAGCGGGATCATCCAGAAGCAAATCTGGGAGACGAGCATCAACAAGGAT
GTGCTGGAACGTCAGCTAAATGCGTACTTCCCTTTCTCCAGGAGCGCCTC
GCTGACCAAGGACGCATCCGGCGGATTCGATCAGCTCCTGGCGCCGGCGA
CAAGTGGAACTGGTCCGAAGTCTCGATCCCTGGCCACCACGCCCACCAGG
CGACCGGCGGGCGTCTGTCTGGAGAAGCTGGAGACGGTGGATGTGGCCTC
CCTCGATCAACAGAAGCAAGCGAAGTAAGGATGCCCAAGGATTATGAGTA
TTCTATCATTGTGATGTCCGTAAGGTTGAAAGGCAGTTTTGAACATTTTT
AGTCTAAGTTAGGATAGGTTGGATATTTTGGATAGACCCCAACATATAAT
TCAGTATATTTAATATATAATATCTGTGAAAAGACGGAACTAGTGTTTCT
TTTTGGTGCTCTAAACTGAAAAATTCTACATTTACTTCAAATGTTAGATT
TAAAAATCTAATGAACAAAGCAAAGAAAAAATCCAAGCTCCCTAAAAATG
AAAAAAATTTCTAATATACGTAGTTTTAAGATTTATTACTAACGTGTAAG
CTGCAAGTCCAGTCCAATCATCCTGAAATCTATTGTTTATTTGGCACCCC
TACAAATTGTCTACAACACTAAAAACAATCAATTTGTATAGTTCAACCAA
TTTCGATGCAAAATACTCCTTTTATTGGCTAAGTTTAAGTCCAGAACATT
CCCGGATCAAAGTAAGACCCATTTAAGCTACTATTATTCAATCTTCTTCA
ATAAAACGAGAGCTTATTGCATAAAAAAAAAAAAAAAAAAA

IP21637.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 426 CG13332-RA 1..426 103..528 2130 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9412686..9413755 3..1072 5170 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:46:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13525377..13526449 1..1073 5365 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13526576..13527648 1..1073 5365 100 Plus
Blast to na_te.dros performed 2019-03-16 21:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 34..116 733..650 138 64.3 Minus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1621..1703 650..733 120 63.5 Plus

IP21637.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:32:45 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9412684..9413755 1..1072 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:54:18 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 103..528 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:12:09 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 103..528 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:56:47 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 103..528 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:22:27 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 103..528 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-15 10:53:21 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..426 103..528 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:12:09 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..1072 1..1072 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:56:47 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..1072 1..1072 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:22:27 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..1072 1..1072 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:32:45 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13525377..13526448 1..1072 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:32:45 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13525377..13526448 1..1072 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:32:45 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13525377..13526448 1..1072 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:56:47 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9412882..9413953 1..1072 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:03:09 Download gff for IP21637.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13526576..13527647 1..1072 100   Plus

IP21637.hyp Sequence

Translation from 0 to 527

> IP21637.hyp
AGSRGDWSSTFPHCWPPNEQSFFTAHINFPAISGMSTDEDSLGSPLKPAT
PTPGEREPTRERHRGGRSGASDLLRHQQSFEARYSGIIQKQIWETSINKD
VLERQLNAYFPFSRSASLTKDASGGFDQLLAPATSGTGPKSRSLATTPTR
RPAGVCLEKLETVDVASLDQQKQAK*

IP21637.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-PA 141 CG13332-PA 1..141 35..175 721 100 Plus

IP21637.pep Sequence

Translation from 0 to 527

> IP21637.pep
AGSRGDWSSTFPHCWPPNEQSFFTAHINFPAISGMSTDEDSLGSPLKPAT
PTPGEREPTRERHRGGRSGASDLLRHQQSFEARYSGIIQKQIWETSINKD
VLERQLNAYFPFSRSASLTKDASGGFDQLLAPATSGTGPKSRSLATTPTR
RPAGVCLEKLETVDVASLDQQKQAK*

IP21637.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:55:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13702-PA 139 GF13702-PA 1..133 35..169 482 75.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20390-PA 142 GG20390-PA 1..142 35..175 592 88.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15720-PA 125 GH15720-PA 1..125 35..155 376 67.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-PA 141 CG13332-PA 1..141 35..175 721 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18335-PA 144 GI18335-PA 37..128 69..158 262 57.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17411-PA 131 GL17411-PA 4..125 37..166 412 69.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12212-PA 131 GA12212-PA 4..125 37..166 412 69.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21477-PA 140 GM21477-PA 1..140 35..175 692 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10973-PA 140 GD10973-PA 1..140 35..175 697 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19761-PA 136 GJ19761-PA 1..124 35..162 361 57.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15967-PA 164 GK15967-PA 1..160 35..175 326 53.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12551-PA 140 GE12551-PA 1..140 35..175 658 91.5 Plus