Clone IP21828 Report

Search the DGRC for IP21828

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:218
Well:28
Vector:pOT2
Associated Gene/TranscriptCG14989-RC
Protein status:IP21828.pep: gold
Sequenced Size:1128

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14989 2008-04-29 Release 5.5 accounting
CG14989 2008-05-05 Release 5.5 slip selected
CG14989 2008-08-15 Release 5.9 accounting
CG14989 2008-12-18 5.12 accounting

Clone Sequence Records

IP21828.complete Sequence

1128 bp assembled on 2007-10-04

GenBank Submission: BT031079

> IP21828.complete
ACTGCTACCATTTGTAGCGGACAGCTTTATATAAATCCCGTCGAGTTAAG
GATTTAAGCATTTCGAGCGGAGCAGGTGCCACGAACAATCGGATTTAATT
GAGTCAAACTTTTGGAAAAGCACACCCAGCGATGGGAGAGCGTGTTGAAA
AGCGACAGAGAAAAATGGGGGGATGTGGATTACAGCTCGTCATACCATTG
GTCACAATCCTCATCCTGGCTGCGCAGGCGCAGGCTGTGACGTCATCGCC
CGTCCTGAAGGACGACACTTTGGGGGATGCTGCTCCGACGGCAGCGCATT
CAGCAGCCAAAATCCTTGAAGACGTCCAAACCATCAGCGCAGTTCAGGAT
TGGAGTTTGCTGTGTAAAGAGCTCTGCGGAGCTGGCCTGGGCGTTGCTTC
AACGCCTGATGTGGCCAAAAACACAATCCTGAGACCGGAGACGGATGTGG
CCAAGTGCCGGCAACTGTGTGGACTGCCTAGGGCTAAAGCGGGCGACTTG
GTCTGCTCGAGCTTTTGTGGTCAGATGGGTCGCTCCCTGCCCGGATGCAG
TCCCTGCCAGCAGGAGGTGCGCAGGATGAGGGTGATGAAGGAGCGGAAGC
AGGAGGAGGAGAAGCAGGAGGAGGTTCGAAAGGACGAGGAGAAGGCCAGT
GGAGTGCTGGGCGATCCAACACACGGTTCCAGAGCCGCGGAGAATGCCGA
ACGGAGAGGATCGGTCGAGGAAGCAACAGTGTCCGCAGCTACCGTGGCAG
CCGCCTCGGAAACGGACACAACCACTCCGGCACCGGACTGGGACGAAGTG
TGCAAGGTGCTCTGCAAGACTGGCGATGGCGGGTCTTTGTGCAACTGTGA
TTTATCGCCGTTCTTCAGCTGAGCGATCCCCACCTTCCTGAGGGGATCGC
TCCCGATGGAGGCGCTAAATCACAAAACCATATATATGGATCGAGAATTA
TCTGATTATCTGATGTTTTGTTGTTCTTCGTTTTTGAACTTCAGTTAGTG
CTATTGTTGTCATGAAAAAGTATCTCCCATATATAATCTATATCGGAAAA
CGTGTTACGAAAGTTTAGTTAAATACTGTAAAGAGATAAAAACAAAAACT
ATAGAAAAATCAAAAAAAAAAAAAAAAA

IP21828.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989.b 2063 CG14989.b 9..1129 1..1121 5605 100 Plus
CG14989.g 2622 CG14989.g 9..1129 1..1121 5605 100 Plus
CG14989.d 2945 CG14989.d 9..1129 1..1121 5605 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4089658..4090286 483..1111 3145 100 Plus
chr3L 24539361 chr3L 4088346..4088600 125..379 1275 100 Plus
chr3L 24539361 chr3L 4086967..4087090 1..124 620 100 Plus
chr3L 24539361 chr3L 4089420..4089532 375..487 535 98.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:46:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4090272..4090910 483..1121 3195 100 Plus
3L 28110227 3L 4088960..4089214 125..379 1275 100 Plus
3L 28110227 3L 4087581..4087704 1..124 620 100 Plus
3L 28110227 3L 4090034..4090146 375..487 535 98.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4090272..4090910 483..1121 3195 100 Plus
3L 28103327 3L 4088960..4089214 125..379 1275 100 Plus
3L 28103327 3L 4087581..4087704 1..124 620 100 Plus
3L 28103327 3L 4090034..4090146 375..487 535 98.2 Plus
Blast to na_te.dros performed on 2019-03-15 19:33:11 has no hits.

IP21828.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:34:29 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4089659..4089747 484..572 100 == Plus
chr3L 4086967..4087090 1..124 100 -> Plus
chr3L 4088346..4088600 125..379 100 -> Plus
chr3L 4089425..4089528 380..483 100 -> Plus
chr3L 4089821..4090286 646..1111 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:27:38 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..708 165..872 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:37:23 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..708 165..872 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:58:54 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 1..741 132..872 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:42:47 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..708 165..872 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:46 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 1..741 132..872 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:06:24 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..947 165..1111 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:37:23 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..947 165..1111 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:54 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 1..1111 1..1111 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:42:47 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RB 1..947 165..1111 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:46 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
CG14989-RC 1..1111 1..1111 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:29 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4087581..4087704 1..124 100 -> Plus
3L 4088960..4089214 125..379 100 -> Plus
3L 4090039..4090142 380..483 100 -> Plus
3L 4090273..4090900 484..1111 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:29 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4087581..4087704 1..124 100 -> Plus
3L 4088960..4089214 125..379 100 -> Plus
3L 4090039..4090142 380..483 100 -> Plus
3L 4090273..4090900 484..1111 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:29 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4087581..4087704 1..124 100 -> Plus
3L 4088960..4089214 125..379 100 -> Plus
3L 4090039..4090142 380..483 100 -> Plus
3L 4090273..4090900 484..1111 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:54 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4090039..4090142 380..483 100 -> Plus
arm_3L 4087581..4087704 1..124 100 -> Plus
arm_3L 4088960..4089214 125..379 100 -> Plus
arm_3L 4090273..4090900 484..1111 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:20:23 Download gff for IP21828.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4088960..4089214 125..379 100 -> Plus
3L 4090039..4090142 380..483 100 -> Plus
3L 4090273..4090900 484..1111 100   Plus
3L 4087581..4087704 1..124 100 -> Plus

IP21828.hyp Sequence

Translation from 131 to 871

> IP21828.hyp
MGERVEKRQRKMGGCGLQLVIPLVTILILAAQAQAVTSSPVLKDDTLGDA
APTAAHSAAKILEDVQTISAVQDWSLLCKELCGAGLGVASTPDVAKNTIL
RPETDVAKCRQLCGLPRAKAGDLVCSSFCGQMGRSLPGCSPCQQEVRRMR
VMKERKQEEEKQEEVRKDEEKASGVLGDPTHGSRAAENAERRGSVEEATV
SAATVAAASETDTTTPAPDWDEVCKVLCKTGDGGSLCNCDLSPFFS*

IP21828.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-PE 246 CG14989-PE 1..246 1..246 1272 100 Plus
CG14989-PD 246 CG14989-PD 1..246 1..246 1272 100 Plus
CG14989-PC 246 CG14989-PC 1..246 1..246 1272 100 Plus
CG14989-PF 171 CG14989-PF 1..171 76..246 902 99.4 Plus

IP21828.pep Sequence

Translation from 131 to 871

> IP21828.pep
MGERVEKRQRKMGGCGLQLVIPLVTILILAAQAQAVTSSPVLKDDTLGDA
APTAAHSAAKILEDVQTISAVQDWSLLCKELCGAGLGVASTPDVAKNTIL
RPETDVAKCRQLCGLPRAKAGDLVCSSFCGQMGRSLPGCSPCQQEVRRMR
VMKERKQEEEKQEEVRKDEEKASGVLGDPTHGSRAAENAERRGSVEEATV
SAATVAAASETDTTTPAPDWDEVCKVLCKTGDGGSLCNCDLSPFFS*

IP21828.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10097-PA 219 GF10097-PA 1..219 1..246 597 56.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15190-PA 229 GG15190-PA 1..229 12..246 875 80.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14563-PA 225 GH14563-PA 6..224 23..245 346 40.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14989-PE 246 CG14989-PE 1..246 1..246 1272 100 Plus
CG14989-PD 246 CG14989-PD 1..246 1..246 1272 100 Plus
CG14989-PC 246 CG14989-PC 1..246 1..246 1272 100 Plus
CG14989-PF 171 CG14989-PF 1..171 76..246 902 99.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13889-PA 220 GI13889-PA 6..217 23..245 296 39.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17074-PA 224 GL17074-PA 13..224 16..246 494 51.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13406-PA 224 GA13406-PA 13..224 16..246 492 51.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14622-PA 236 GM14622-PA 1..236 12..246 922 87.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13810-PA 238 GD13810-PA 1..238 12..246 946 88.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11744-PA 225 GJ11744-PA 6..225 23..246 324 39.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25156-PA 242 GK25156-PA 47..240 46..244 417 48.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21410-PA 211 GE21410-PA 1..211 36..246 713 78 Plus