Clone IP21851 Report

Search the DGRC for IP21851

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:218
Well:51
Vector:pOT2
Associated Gene/TranscriptCG3713-RA
Protein status:IP21851.pep: gold
Sequenced Size:997

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3713 2008-04-29 Release 5.5 accounting
CG3713 2008-08-15 Release 5.9 accounting
CG3713 2008-12-18 5.12 accounting

Clone Sequence Records

IP21851.complete Sequence

997 bp assembled on 2007-10-29

GenBank Submission: BT031117

> IP21851.complete
GCGAGCACCGCATAATCAGAGGTGGGGATGTTTCTGGGCTTCTTGGTGGA
TCTGCTGTACTGCCGACGCTGCGGGGACGACTGTATGATGGAATTCCCAT
CGACTTCCGCGAATGAAGAAGCAGCGCCGAAAGTGGTAAAGGTCGAACTG
CCGCCGCTGCCGCCACTGACCTTTGAACTCATCCGCAATCCATTGGCTGC
CGACCAGGAGTGCGATGATAGCTTCGAAGGCTTCGTCGATGGTTATGATG
ATCCCAGGCTGCCGGAAACCATCATCTGATTCAAAAAAAGCTTGCCACTC
ACTGGCATTCCGCACTCCGCTTCATTTGGTTTAATTAAAACTCTTTTTGC
CATAATCCAATTAAGACCAAAGGCAAAAACCAAATGACAACAAATGGCAT
AATGGCCAGACAACAAAACAGACGGCAAAAAATAGAAAAACTCGACAAAC
TCAAACAAAGCTCCGCACAAAGCAAAAAAAAAAAACTGAACAAAACAAAA
TGCAAACAAACAATGCAATAAAATTCAATTACAACAAAATTTTAATTAAC
TTTTTGCAATCAAAACACAAACCAAATGAGGAGACAACTGGCATCCGAAT
TGAAAGCCAATAAAAATGGGCGTAATAACCTAACCAATCTACAGGTCATC
GATGGACAGGAGAGGGTTAAACGAATCTGACAAAGGCTGTGTACGTTAGC
TTCAAATGGGATAGGATTACTTGAGTGTATCATGTTATGTGTGCAAAAGT
TTAAAAATGTATATGCACGCACATATGGTAAATGTTTGGATTCGATTGGG
AGCCCCAAAGAACCAGGCACAGTTTTCCAAACAATAGAAACTACTTGTAG
TCGTGTGCCAACTATCGGATACCTTATAGTTTGTATTAAAGTTTGTTATT
GACTTATTTACTTTACGAGTACTGATGGAAATGAGTATAAATATGAAAAT
ATTGTTTGTAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA

IP21851.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG3713-RA 529 CG3713-RA 39..523 1..485 2425 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:37:27
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 740106..741067 962..1 4750 99.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:46:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 846168..847130 962..1 4705 99.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:30:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 854266..855228 962..1 4715 99.4 Minus
Blast to na_te.dros performed 2019-03-16 09:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
TART-C 11124 TART-C TARTC 11124bp 385..431 928..976 113 75.5 Plus

IP21851.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:38:07 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 740109..740528 540..959 99 == Minus
chrX 740657..741067 1..411 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:27:50 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 1..252 28..279 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:03:23 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 1..252 28..279 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:38:02 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 1..252 28..279 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:48:43 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 1..252 28..279 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:42:36 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 1..252 28..279 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:53:08 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 39..511 1..473 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:03:23 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 39..511 1..473 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:38:02 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 28..987 1..959 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:48:43 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 39..511 1..473 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:42:36 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
CG3713-RA 28..987 1..959 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
X 846171..847130 1..959 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
X 846171..847130 1..959 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
X 846171..847130 1..959 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:38:02 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 740204..741163 1..959 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:55:22 Download gff for IP21851.complete
Subject Subject Range Query Range Percent Splice Strand
X 854269..855228 1..959 99   Minus

IP21851.hyp Sequence

Translation from 27 to 278

> IP21851.hyp
MFLGFLVDLLYCRRCGDDCMMEFPSTSANEEAAPKVVKVELPPLPPLTFE
LIRNPLAADQECDDSFEGFVDGYDDPRLPETII*

IP21851.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3713-PB 83 CG3713-PB 1..83 1..83 448 100 Plus
CG3713-PA 83 CG3713-PA 1..83 1..83 448 100 Plus

IP21851.pep Sequence

Translation from 27 to 278

> IP21851.pep
MFLGFLVDLLYCRRCGDDCMMEFPSTSANEEAAPKVVKVELPPLPPLTFE
LIRNPLAADQECDDSFEGFVDGYDDPRLPETII*

IP21851.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12736-PA 86 GG12736-PA 1..86 1..83 323 79.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG3713-PB 83 CG3713-PB 1..83 1..83 448 100 Plus
CG3713-PA 83 CG3713-PA 1..83 1..83 448 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19018-PA 86 GM19018-PA 1..86 1..83 348 90.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16454-PA 86 GD16454-PA 1..86 1..83 346 89.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:30:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16563-PA 81 GE16563-PA 1..81 1..83 283 81 Plus