IP21851.complete Sequence
997 bp assembled on 2007-10-29
GenBank Submission: BT031117
> IP21851.complete
GCGAGCACCGCATAATCAGAGGTGGGGATGTTTCTGGGCTTCTTGGTGGA
TCTGCTGTACTGCCGACGCTGCGGGGACGACTGTATGATGGAATTCCCAT
CGACTTCCGCGAATGAAGAAGCAGCGCCGAAAGTGGTAAAGGTCGAACTG
CCGCCGCTGCCGCCACTGACCTTTGAACTCATCCGCAATCCATTGGCTGC
CGACCAGGAGTGCGATGATAGCTTCGAAGGCTTCGTCGATGGTTATGATG
ATCCCAGGCTGCCGGAAACCATCATCTGATTCAAAAAAAGCTTGCCACTC
ACTGGCATTCCGCACTCCGCTTCATTTGGTTTAATTAAAACTCTTTTTGC
CATAATCCAATTAAGACCAAAGGCAAAAACCAAATGACAACAAATGGCAT
AATGGCCAGACAACAAAACAGACGGCAAAAAATAGAAAAACTCGACAAAC
TCAAACAAAGCTCCGCACAAAGCAAAAAAAAAAAACTGAACAAAACAAAA
TGCAAACAAACAATGCAATAAAATTCAATTACAACAAAATTTTAATTAAC
TTTTTGCAATCAAAACACAAACCAAATGAGGAGACAACTGGCATCCGAAT
TGAAAGCCAATAAAAATGGGCGTAATAACCTAACCAATCTACAGGTCATC
GATGGACAGGAGAGGGTTAAACGAATCTGACAAAGGCTGTGTACGTTAGC
TTCAAATGGGATAGGATTACTTGAGTGTATCATGTTATGTGTGCAAAAGT
TTAAAAATGTATATGCACGCACATATGGTAAATGTTTGGATTCGATTGGG
AGCCCCAAAGAACCAGGCACAGTTTTCCAAACAATAGAAACTACTTGTAG
TCGTGTGCCAACTATCGGATACCTTATAGTTTGTATTAAAGTTTGTTATT
GACTTATTTACTTTACGAGTACTGATGGAAATGAGTATAAATATGAAAAT
ATTGTTTGTAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAA
IP21851.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:34:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3713-RA | 529 | CG3713-RA | 39..523 | 1..485 | 2425 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:37:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 740106..741067 | 962..1 | 4750 | 99.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:46:53 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:37:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 846168..847130 | 962..1 | 4705 | 99.5 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:30:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 854266..855228 | 962..1 | 4715 | 99.4 | Minus |
Blast to na_te.dros performed 2019-03-16 09:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-C | 11124 | TART-C TARTC 11124bp | 385..431 | 928..976 | 113 | 75.5 | Plus |
IP21851.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:38:07 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 740109..740528 | 540..959 | 99 | == | Minus |
chrX | 740657..741067 | 1..411 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:27:50 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 1..252 | 28..279 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:03:23 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 1..252 | 28..279 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:38:02 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 1..252 | 28..279 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:48:43 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 1..252 | 28..279 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:42:36 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 1..252 | 28..279 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:53:08 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 39..511 | 1..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:03:23 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 39..511 | 1..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:38:02 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 28..987 | 1..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:48:43 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 39..511 | 1..473 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:42:36 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3713-RA | 28..987 | 1..959 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 846171..847130 | 1..959 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 846171..847130 | 1..959 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:38:07 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 846171..847130 | 1..959 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:38:02 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 740204..741163 | 1..959 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:55:22 Download gff for
IP21851.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 854269..855228 | 1..959 | 99 | | Minus |
IP21851.hyp Sequence
Translation from 27 to 278
> IP21851.hyp
MFLGFLVDLLYCRRCGDDCMMEFPSTSANEEAAPKVVKVELPPLPPLTFE
LIRNPLAADQECDDSFEGFVDGYDDPRLPETII*
IP21851.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:17:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3713-PB | 83 | CG3713-PB | 1..83 | 1..83 | 448 | 100 | Plus |
CG3713-PA | 83 | CG3713-PA | 1..83 | 1..83 | 448 | 100 | Plus |
IP21851.pep Sequence
Translation from 27 to 278
> IP21851.pep
MFLGFLVDLLYCRRCGDDCMMEFPSTSANEEAAPKVVKVELPPLPPLTFE
LIRNPLAADQECDDSFEGFVDGYDDPRLPETII*
IP21851.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12736-PA | 86 | GG12736-PA | 1..86 | 1..83 | 323 | 79.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3713-PB | 83 | CG3713-PB | 1..83 | 1..83 | 448 | 100 | Plus |
CG3713-PA | 83 | CG3713-PA | 1..83 | 1..83 | 448 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:30:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19018-PA | 86 | GM19018-PA | 1..86 | 1..83 | 348 | 90.7 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:30:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD16454-PA | 86 | GD16454-PA | 1..86 | 1..83 | 346 | 89.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:30:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16563-PA | 81 | GE16563-PA | 1..81 | 1..83 | 283 | 81 | Plus |