Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP21958.complete Sequence
917 bp assembled on 2008-10-23
GenBank Submission: BT050535.1
> IP21958.complete
TATCGTTTAAGATTAGTCCTTCGCAACTGAAACCGATTTGGTTAGCCAAA
TTATGACCATCACCAACTGGTTTAATTGGTCCGTAAAGGATTTAAGCAAT
GAGTCCCATGCGAGACCCAAGTTGATTCCGGGATTCGACCAGTTGGATAA
GAGGCTGCAGGCGGCGCTTCAGGAGCGGGACGTGCAAAAGCATCAGCGCA
AGCGTACACAGGCGGGTGGTGGCCAAAGCCAGGCAAAGCCCAAAAAGCTC
AAGACGACCAGAAAACAGACACCAAGGGTATGCAAATTCCAGAAGGTTTA
CACTGAGAAACGCAAGAAGCTAAAACGAGAGGCCAACATGCAAAGTAATG
CGTTTCAGTTCCGGAGCAGACCTGTGCCCGATTTCGAGCGATCTCATCGT
CGTTTGGAAAGGCGCAAGCTGTACCTGAACTCTCTGCAAACGGTGACGAA
GCCCCGATGCCCTGCCACGCTGGCCACGTCAATGGTCGCTTTAAACAAGC
GCCTAAAGAAGCAAAGGCAGAGCCGAAAGACATCCGACTTTGTGCCCCGA
ATCAATCCAGGCTCTTCTATGGACTACCTCAACCGGCAGCCCTTTACGCC
GCTTGTCAAGTCCTCCTTTACCCATCCAAAACCTTTTCATCTCCATACGT
CGGAGCGTGCTCTGCGCCGCCAAGTGTATGACGAGAGGAAAAGGATACGG
ATGGATCGGCGTTTGGAGCAGCAGACCATCGATTGGTTTGCACGGGAAAG
AAGCGAGTACTTTAAGCTACGCAAAATGACAAATTTCAAGGCTACGCCGA
ATCCCTGGAAGCAAACAAGGGTCACCGCTAGAAAAGATTCTCAGGCAGCC
TAGAAATGAGATTGTAAATTAAATTTGAAACAAGCTGAATATGGCAGCAA
AAAAAAAAAAAAAAAAA
IP21958.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:11:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5781-RA | 1349 | CG5781-RA | 452..1349 | 1..898 | 4490 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:11:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 12695117..12696014 | 898..1 | 4490 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:47:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:11:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12696421..12697323 | 903..1 | 4515 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:28:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12696421..12697323 | 903..1 | 4515 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 17:11:28 has no hits.
IP21958.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:12:11 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 12695117..12696014 | 1..898 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:28:27 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..801 | 53..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:16:08 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..801 | 53..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:31:03 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..801 | 53..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:13 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..801 | 53..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:55:35 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 452..1349 | 1..898 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:16:08 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 452..1349 | 1..898 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:03 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..898 | 1..898 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-23 18:44:10 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 452..1349 | 1..898 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:54:13 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5781-RA | 1..898 | 1..898 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:12:11 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12696426..12697323 | 1..898 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:12:11 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12696426..12697323 | 1..898 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:12:11 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12696426..12697323 | 1..898 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:03 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12696426..12697323 | 1..898 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:47:03 Download gff for
IP21958.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12696426..12697323 | 1..898 | 100 | | Minus |
IP21958.pep Sequence
Translation from 52 to 852
> IP21958.pep
MTITNWFNWSVKDLSNESHARPKLIPGFDQLDKRLQAALQERDVQKHQRK
RTQAGGGQSQAKPKKLKTTRKQTPRVCKFQKVYTEKRKKLKREANMQSNA
FQFRSRPVPDFERSHRRLERRKLYLNSLQTVTKPRCPATLATSMVALNKR
LKKQRQSRKTSDFVPRINPGSSMDYLNRQPFTPLVKSSFTHPKPFHLHTS
ERALRRQVYDERKRIRMDRRLEQQTIDWFARERSEYFKLRKMTNFKATPN
PWKQTRVTARKDSQAA*
IP21958.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15659-PA | 258 | GF15659-PA | 1..256 | 1..253 | 594 | 47.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10244-PA | 267 | GG10244-PA | 1..265 | 1..266 | 1023 | 77.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH11664-PA | 261 | GH11664-PA | 29..260 | 31..259 | 190 | 29.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5781-PA | 266 | CG5781-PA | 1..266 | 1..266 | 1392 | 100 | Plus |
mei-38-PC | 347 | CG14781-PC | 195..347 | 74..253 | 195 | 28.2 | Plus |
CG15395-PB | 275 | CG15395-PB | 84..273 | 74..255 | 175 | 26.9 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI17108-PA | 261 | GI17108-PA | 1..260 | 1..258 | 299 | 34.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA19123-PA | 269 | GA19123-PA | 1..263 | 1..259 | 401 | 39.6 | Plus |
Dpse\GA13699-PA | 210 | GA13699-PA | 41..208 | 73..255 | 143 | 27.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM26042-PA | 263 | GM26042-PA | 1..263 | 1..266 | 1227 | 91.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:10:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22103-PA | 261 | GD22103-PA | 1..261 | 1..266 | 1198 | 90.6 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:10:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ16146-PA | 263 | GJ16146-PA | 1..261 | 1..257 | 318 | 34.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12108-PA | 267 | GE12108-PA | 1..267 | 1..266 | 1076 | 76.8 | Plus |
IP21958.hyp Sequence
Translation from 52 to 852
> IP21958.hyp
MTITNWFNWSVKDLSNESHARPKLIPGFDQLDKRLQAALQERDVQKHQRK
RTQAGGGQSQAKPKKLKTTRKQTPRVCKFQKVYTEKRKKLKREANMQSNA
FQFRSRPVPDFERSHRRLERRKLYLNSLQTVTKPRCPATLATSMVALNKR
LKKQRQSRKTSDFVPRINPGSSMDYLNRQPFTPLVKSSFTHPKPFHLHTS
ERALRRQVYDERKRIRMDRRLEQQTIDWFARERSEYFKLRKMTNFKATPN
PWKQTRVTARKDSQAA*
IP21958.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:18:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5781-PA | 266 | CG5781-PA | 1..266 | 1..266 | 1392 | 100 | Plus |
CG15395-PB | 275 | CG15395-PB | 84..273 | 74..255 | 175 | 26.9 | Plus |