Clone KHBD00546 Report

Search the DGRC for KHBD00546

Clone and Library Details

Library:KHBD
Tissue Source:
Created by:
Date Registered:2011-09-07
Comments:
Original Plate Number:10
Well:15
Vector:pDONR221
Associated Gene/TranscriptCG18599-RA
Protein status:KHBD00546.pep: Inserted from web
Sequenced Size:Not sequenced

Clone Sequence Records

KHBD00546.complete Sequence

1425 bp (1425 high quality bases) assembled on 2011-07-12

> KHBD00546.complete
ATGCTGCAGAATCCTTCCAAATATCACGCAAATCCCTTGTCGCACTTCCT
GGCATTGCATAACACACAAGCCAGTGGCGGCGGCAGCGGCGGGGGATCGT
CGGTCGCCGGACTTGGAGGTTTGGGTGGGGGCATTCATGCACATGGTCAA
CCGCATCATGCAGCGCTGGCAGCGGCTGCAGCAGCGGCGGTCGCTGTCTC
GGCGGGTCAGAGTTCATACCAAATGGAGCACCAGCAGCAGCATCATCAGT
TGCAGCAGCAGCAGCAGCAGCAGCAACATCATCATCATCAGCAGCTGCAC
ACCCACCACCAGGATGGCCACCACCCACACCCACCGACACCCACCACCGG
CAACAACAACAACAACAGCAGTAGCAGCAGCAACAGCAGCAGCCACAACA
GCAACAGCAACCACCGGGAACAGTTGGCGGCGGCGGCAGCCACTGCGACG
TCGCACGCGCAGCTCATCGAGGCGGCAGCGGCGCATTCCTCCCTCGACGT
GGGCAAGTCCTTTACCATCGCCGCCATTTTGGGCCTGCAGAGCCAGCGCA
AGGACTACAACAATGCCATCAATCTCTCCCTGCACGACAACAACAACATC
ATCGGTGACGACAACAACAAGTGCTACACGAGCAACCCCAACAACAACAA
CAACAACAACAATAACGGCGGCAGCAACAGTGGCAACAACAACAGCAGCC
CGAGTGTAAACAACTTCAATTGTGATAGTGTCGCCGGTAATGGACGTTAC
CTGCACGGCGGACACCAGCATCCGCATCCGCACCAGGCGGGATTTGCAGC
GGTTGCCGCCGCCGTCGGAGCAGCTCCCTCCGCCCTGCAGAGCCTGCAGC
AGCTCCACCAGCAACACCACGCTCAGCAGCAGGCCACCCTGAGCTTTCAG
CGGGAAAAACTCAAGTCGGATTCTCACAAGAAGAGCGCACTGAAGAACAA
GCGCGTCCGGACAATCTTCACGCCGGAGCAGTTGGAGTGCCTGGAGGCGG
AGTTCGAGCGCCAGCAGTACATGGTCGGCCCGGAGCGGCTCTACTTGGCA
CACACCCTAAAGTTAACGGAGGCTCAGGTGAAGGTGTGGTTCCAGAATAG
GCGGATCAAGTGGCGCAAGCACCACTTGGAACTGACACAACAACGGCTGG
CATTGATAAGGCAAACTCAACTGCCAGGTACATCGTTATTGGGCAATCAA
GTATCCGTGTCGGCCAATGCGGCCCATTCTGTGTCCACGGAACGCACAAA
CGGATGCAGTGCAGCCTCGCCCAGCCTGCAGGAGGAGGACAACGAGGATA
GCAAGCACTCGCTGTCGCTTTCGGGCGCATTACCGCCGTTGAGTCGAGCG
CAGTCCGAGTCGGATTTGTCCATCTGTAACGATTCCCTGGACGGCGACAG
CCTCATGGACGGCAGCGAGGAGGCC

KHBD00546.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:05:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14093851..14094769 1..919 4595 100 Plus
chr3R 27901430 chr3R 14094886..14095392 919..1425 2535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18269557..18270475 1..919 4595 100 Plus
3R 32079331 3R 18270592..18271098 919..1425 2535 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18010388..18011306 1..919 4595 100 Plus
3R 31820162 3R 18011423..18011929 919..1425 2535 100 Plus
X 23527363 X 4089197..4089244 294..247 195 93.7 Minus
3L 28103327 3L 12456785..12456853 295..227 195 85.5 Minus
Blast to na_te.dros performed 2019-03-15 11:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6877 763..882 140 59.5 Plus

KHBD00546.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:06:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14093851..14094069 1..219 100 == Plus
chr3R 14094150..14094190 300..340 100 == Plus
chr3R 14094262..14094433 412..583 100 == Plus
chr3R 14094548..14094769 698..919 100 -> Plus
chr3R 14094887..14095392 920..1425 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-21 15:20:15 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 1..1425 1..1425 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:35:10 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 1..1425 1..1425 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:21:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 1..1425 1..1425 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 15:20:15 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 350..1774 1..1425 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:35:10 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 350..1774 1..1425 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:21:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
CG18599-RA 349..1773 1..1425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:06:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18269557..18270475 1..919 100 -> Plus
3R 18270593..18271098 920..1425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:06:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18269557..18270475 1..919 100 -> Plus
3R 18270593..18271098 920..1425 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:06:26 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18269557..18270475 1..919 100 -> Plus
3R 18270593..18271098 920..1425 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:35:10 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14095279..14096197 1..919 100 -> Plus
arm_3R 14096315..14096820 920..1425 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:29:48 Download gff for KHBD00546.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18010388..18011306 1..919 100 -> Plus
3R 18011424..18011929 920..1425 100   Plus

KHBD00546.pep Sequence

Translation from 0 to 1425

> KHBD00546.pep
MLQNPSKYHANPLSHFLALHNTQASGGGSGGGSSVAGLGGLGGGIHAHGQ
PHHAALAAAAAAAVAVSAGQSSYQMEHQQQHHQLQQQQQQQQHHHHQQLH
THHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATAT
SHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNI
IGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRY
LHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQ
REKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLA
HTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQ
VSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPLSRA
QSESDLSICNDSLDGDSLMDGSEEA

KHBD00546.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:10:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23077-PA 448 GF23077-PA 1..447 1..474 1266 74.1 Plus
Dana\GF25192-PA 522 GF25192-PA 401..461 315..375 204 54.1 Plus
Dana\GF17487-PA 728 GF17487-PA 367..435 306..374 190 47.8 Plus
Dana\GF16414-PA 667 GF16414-PA 552..610 315..373 189 57.6 Plus
Dana\GF12182-PA 380 GF12182-PA 92..152 315..375 188 49.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22815-PA 460 GG22815-PA 1..460 1..475 1159 81.3 Plus
Dere\GG13719-PA 600 GG13719-PA 475..535 315..375 203 54.1 Plus
Dere\GG22042-PA 381 GG22042-PA 85..145 315..375 189 49.2 Plus
Dere\GG19116-PA 551 GG19116-PA 303..361 315..373 187 52.5 Plus
Dere\GG21357-PA 721 GG21357-PA 384..452 306..374 186 47.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:10:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18566-PA 478 GH18566-PA 1..478 1..475 941 58.2 Plus
Dgri\GH13706-PA 752 GH13706-PA 394..462 306..374 189 47.8 Plus
Dgri\GH13609-PA 719 GH13609-PA 607..663 317..373 189 57.9 Plus
Dgri\GH19750-PA 385 GH19750-PA 78..150 303..375 188 45.2 Plus
Dgri\GH14408-PA 506 GH14408-PA 399..457 315..373 187 59.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG18599-PA 475 CG18599-PA 1..475 1..475 2495 100 Plus
B-H2-PA 645 CG5488-PA 73..437 54..373 270 28 Plus
Scr-PB 417 CG1030-PB 26..383 11..375 242 25.9 Plus
Scr-PA 417 CG1030-PA 26..383 11..375 242 25.9 Plus
HGTX-PA 513 CG13475-PA 116..451 45..375 215 24.7 Plus
C15-PA 339 CG7937-PA 5..278 90..377 209 24.2 Plus
toe-PA 640 CG10704-PA 302..457 202..395 201 34 Plus
Dbx-PC 741 CG42234-PC 185..490 70..372 199 23.9 Plus
pnt-PC 623 CG17077-PC 81..320 46..240 193 25.7 Plus
repo-PA 612 CG31240-PA 62..362 21..374 192 27.1 Plus
sdt-PM 1901 CG32717-PM 375..639 55..312 192 26.6 Plus
sdt-PL 1941 CG32717-PL 375..639 55..312 192 26.6 Plus
sdt-PG 2020 CG32717-PG 375..639 55..312 192 26.6 Plus
Hmx-PE 592 CG43748-PE 313..525 195..373 188 27.9 Plus
Hmx-PC 592 CG43748-PC 313..525 195..373 188 27.9 Plus
Hmx-PD 718 CG43748-PD 313..525 195..373 188 27.9 Plus
disco-r-PD 1311 CG32577-PD 53..317 52..294 187 26.4 Plus
disco-r-PC 1311 CG32577-PC 53..317 52..294 187 26.4 Plus
disco-r-PB 1311 CG32577-PB 53..317 52..294 187 26.4 Plus
disco-r-PA 1311 CG32577-PA 53..317 52..294 187 26.4 Plus
Tet-PA 2860 CG43444-PA 60..232 46..239 187 28.8 Plus
Tet-PE 2866 CG43444-PE 60..232 46..239 187 28.8 Plus
Tet-PB 2915 CG43444-PB 60..232 46..239 187 28.8 Plus
Tet-PF 2921 CG43444-PF 60..232 46..239 187 28.8 Plus
Rx-PB 904 CG10052-PB 230..634 3..392 185 24 Plus
slou-PA 659 CG6534-PA 199..604 76..375 184 24.9 Plus
slou-PB 698 CG6534-PB 199..604 76..375 184 24.9 Plus
bru1-PG 810 CG31762-PG 95..306 70..248 183 29.2 Plus
bru1-PB 810 CG31762-PB 95..306 70..248 183 29.2 Plus
B-H1-PA 544 CG5529-PA 19..404 77..417 180 25.2 Plus
Lmx1a-PC 639 CG32105-PC 6..257 5..241 179 24.6 Plus
Lmx1a-PB 640 CG32105-PB 6..257 5..241 179 24.6 Plus
Gsc-PC 415 CG2851-PC 241..377 244..418 178 32.4 Plus
Gsc-PD 473 CG2851-PD 299..435 244..418 178 32.4 Plus
Pdp1-PC 570 CG17888-PC 17..243 70..240 178 28.2 Plus
Pdp1-PL 581 CG17888-PL 17..243 70..240 178 28.2 Plus
eyg-PC 670 CG10488-PC 347..465 315..461 177 36.7 Plus
eyg-PB 670 CG10488-PB 347..465 315..461 177 36.7 Plus
eyg-PA 670 CG10488-PA 347..465 315..461 177 36.7 Plus
bsh-PC 429 CG10604-PC 15..386 46..429 176 23.6 Plus
bsh-PB 429 CG10604-PB 15..386 46..429 176 23.6 Plus
ems-PA 494 CG2988-PA 332..449 266..377 174 41.5 Plus
lms-PC 378 CG13424-PC 85..225 315..447 173 31.9 Plus
lms-PB 378 CG13424-PB 85..225 315..447 173 31.9 Plus
NK7.1-PD 721 CG8524-PD 135..450 66..373 173 24.7 Plus
NK7.1-PC 721 CG8524-PC 135..450 66..373 173 24.7 Plus
NK7.1-PB 721 CG8524-PB 135..450 66..373 173 24.7 Plus
NK7.1-PA 721 CG8524-PA 135..450 66..373 173 24.7 Plus
B-H2-PB 303 CG5488-PB 26..95 306..373 170 47.1 Plus
zen-PA 353 CG1046-PA 31..213 251..435 169 28.1 Plus
E5-PA 524 CG9930-PA 251..364 252..377 169 37.3 Plus
Pdp1-PC 570 CG17888-PC 159..312 59..247 161 30.5 Plus
Pdp1-PL 581 CG17888-PL 159..312 59..247 161 30.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24764-PA 496 GI24764-PA 1..496 1..475 1099 61.5 Plus
Dmoj\GI24810-PA 787 GI24810-PA 409..477 306..374 191 47.8 Plus
Dmoj\GI24800-PA 754 GI24800-PA 641..697 317..373 189 57.9 Plus
Dmoj\GI15964-PA 524 GI15964-PA 280..338 315..373 186 52.5 Plus
Dmoj\GI20286-PA 392 GI20286-PA 92..152 315..375 185 49.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:10:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21794-PA 452 GL21794-PA 1..452 1..475 1182 69.7 Plus
Dper\GL20983-PA 612 GL20983-PA 489..549 315..375 202 54.1 Plus
Dper\GL11409-PA 383 GL11409-PA 90..150 315..375 190 49.2 Plus
Dper\GL24020-PA 773 GL24020-PA 405..473 306..374 190 47.8 Plus
Dper\GL24224-PA 491 GL24224-PA 384..442 315..373 187 59.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:10:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15009-PA 447 GA15009-PA 1..447 1..475 1213 72.2 Plus
Dpse\GA12313-PA 621 GA12313-PA 498..558 315..375 203 54.1 Plus
Dpse\GA12277-PA 383 GA12277-PA 90..150 315..375 190 49.2 Plus
Dpse\GA21136-PA 761 GA21136-PA 394..462 306..374 190 47.8 Plus
Dpse\GA19667-PA 678 GA19667-PA 565..621 317..373 189 57.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15295-PA 466 GM15295-PA 1..466 1..475 2316 95.4 Plus
Dsec\GM24540-PA 606 GM24540-PA 484..544 315..375 203 54.1 Plus
Dsec\GM22025-PA 378 GM22025-PA 85..145 315..375 188 49.2 Plus
Dsec\GM11004-PA 660 GM11004-PA 547..603 317..373 187 57.9 Plus
Dsec\GM13509-PA 461 GM13509-PA 215..273 315..373 186 52.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19222-PA 467 GD19222-PA 1..467 1..475 2364 97.1 Plus
Dsim\GD12614-PA 644 GD12614-PA 522..582 315..375 202 54.1 Plus
Dsim\GD11523-PA 378 GD11523-PA 85..145 315..375 188 49.2 Plus
Dsim\GD15668-PA 547 GD15668-PA 301..359 315..373 187 52.5 Plus
Dsim\GD19974-PA 658 GD19974-PA 545..601 317..373 187 57.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22550-PA 469 GJ22550-PA 272..469 275..475 723 78.6 Plus
Dvir\GJ24455-PA 758 GJ24455-PA 394..462 306..374 192 47.8 Plus
Dvir\GJ24446-PA 699 GJ24446-PA 586..642 317..373 189 57.9 Plus
Dvir\GJ22569-PA 496 GJ22569-PA 389..447 315..373 187 59.3 Plus
Dvir\GJ22013-PA 373 GJ22013-PA 82..142 315..375 186 49.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22391-PA 443 GK22391-PA 138..443 149..475 847 68.2 Plus
Dwil\GK10592-PA 499 GK10592-PA 381..441 315..375 204 54.1 Plus
Dwil\GK14259-PA 686 GK14259-PA 571..629 315..373 192 57.6 Plus
Dwil\GK12153-PA 788 GK12153-PA 416..484 306..374 191 47.8 Plus
Dwil\GK21480-PA 384 GK21480-PA 116..176 315..375 187 49.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25529-PA 446 GE25529-PA 1..446 1..475 1282 85.7 Plus
Dyak\GE11203-PA 274 GE11203-PA 60..270 139..350 373 71.6 Plus
Dyak\GE20015-PA 608 GE20015-PA 485..545 315..375 204 54.1 Plus
Dyak\GE12123-PA 380 GE12123-PA 85..145 315..375 189 49.2 Plus
Dyak\GE24972-PA 667 GE24972-PA 554..610 317..373 188 57.9 Plus

KHBD00546.hyp Sequence

Translation from 1 to 1425

> KHBD00546.hyp
MLQNPSKYHANPLSHFLALHNTQASGGGSGGGSSVAGLGGLGGGIHAHGQ
PHHAALAAAAAAAVAVSAGQSSYQMEHQQQHHQLQQQQQQQQHHHHQQLH
THHQDGHHPHPPTPTTGNNNNNSSSSSNSSSHNSNSNHREQLAAAAATAT
SHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNI
IGDDNNKCYTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRY
LHGGHQHPHPHQAGFAAVAAAVGAAPSALQSLQQLHQQHHAQQQATLSFQ
REKLKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLA
HTLKLTEAQVKVWFQNRRIKWRKHHLELTQQRLALIRQTQLPGTSLLGNQ
VSVSANAAHSVSTERTNGCSAASPSLQEEDNEDSKHSLSLSGALPPLSRA
QSESDLSICNDSLDGDSLMDGSEEA

KHBD00546.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG18599-PA 475 CG18599-PA 1..475 1..475 2495 100 Plus
HGTX-PA 513 CG13475-PA 116..451 45..375 215 24.7 Plus
C15-PA 339 CG7937-PA 5..278 90..377 209 24.2 Plus
toe-PA 640 CG10704-PA 302..457 202..395 201 34 Plus
Dbx-PC 741 CG42234-PC 185..490 70..372 199 23.9 Plus