Clone KHBD00642 Report

Search the DGRC for KHBD00642

Clone and Library Details

Library:KHBD
Tissue Source:
Created by:
Date Registered:2011-09-07
Comments:
Original Plate Number:10
Well:31
Vector:pDONR221
Associated Gene/TranscriptHsf-RA
Protein status:KHBD00642.pep: Inserted from web
Sequenced Size:Not sequenced

Clone Sequence Records

KHBD00642.complete Sequence

2073 bp assembled on 2011-09-07

> KHBD00642.complete
ATGTCCAGGTCGCGTTCATCCGCTAAAGCCGTGCAGTTCAAGCACGAATC
GGAGGAAGAGGAAGAAGACGAGGAGGAGCAGCTGCCTTCCAGGAGAATGC
ACTCTTACGGAGACGCCGCGGCCATCGGAAGCGGGGTGCCGGCCTTTTTG
GCCAAATTGTGGCGCCTGGTGGACGATGCCGATACCAATCGCTTGATTTG
CTGGACCAAGGATGGCCAAAGTTTCGTTATACAAAATCAAGCGCAATTCG
CCAAGGAACTATTGCCACTAAACTACAAGCACAACAACATGGCCAGCTTC
ATAAGGCAATTGAATATGTATGGATTCCACAAGATCACCTCTATTGACAA
TGGCGGACTACGTTTTGATCGCGACGAGATTGAATTTTCGCACCCATTTT
TTAAGCGCAACTCGCCTTTTCTACTTGACCAAATCAAAAGGAAAATATCG
AACAACAAAAATGGTGACGACAAAGGTGTCCTGAAGCCGGAGGCCATGTC
GAAGATTCTCACCGATGTGAAAGTCATGCGGGGTCGTCAGGACAATCTGG
ATTCGCGCTTCTCCGCCATGAAACAGGAGAACGAAGTGCTGTGGCGCGAG
ATAGCCAGCCTGCGCCAAAAGCACGCTAAGCAGCAACAAATAGTCAACAA
ACTGATCCAGTTCCTCATTACCATTGTGCAACCGTCGCGCAACATGTCTG
GCGTGAAACGCCACGTGCAGCTGATGATCAACAATACGCCGGAAATTGAT
CGTGCACGGACCACCAGTGAGACCGAGAGCGAGAGTGGCGGCGGACCGGT
TATCCACGAGCTTAGGGAGGAGCTTCTTGATGAGGTGATGAATCCATCAC
CGGCTGGCTACACCGCAGCCTCACATTATGACCAAGAGAGCGTCTCTCCG
CCTGCCGTTGAGCGTCCGCGATCTAACATGAGCATTAGCTCGCACAACGT
CGATTATTCGAATCAGAGTGTGGAGGACTTGCTGCTCCAGGGAAATGGAA
CCGCTGGCGGTAATATTCTAGTAGGCGGAGCCGCTTCTCCCATGGCCCAA
AGTGTGAGTCAATCGCCGGCCCAACATGATGTCTACACAGTCACCGAGGC
GCCCGATTCTCATGTCCAGGAGGTGCCAAACAGTCCGCCTTATTACGAGG
AGCAGAATGTGCTTACCACGCCCATGGTGCGGGAGCAGGAGCAGCAGAAG
CGTCAGCAGCTTAAGGAGAACAACAAGCTACGACGACAGGCAGGAGATGT
TATACTTGATGCTGGAGATATTCTCGTAGATAGTTCGTCGCCCAAGGCGC
AACGGACAAGCATCCAGCATAGTACGCAACCTGATGTGATGGTCCAGCCA
ATGATTATAAAGTCTGAGCCGGAGAACAGTTCCGGACTGATGGATCTAAT
GACTCCCGCGAACGATCTGTACAGTGTTAACTTCATCAGTGAGGATATGC
CGACGGATATTTTTGAAGACGCTCTGCTTCCCGACGGCGTGGAAGAGGCA
GCCAAACTGGACCAGCAACAAAAATTTGGGCAATCGACAGTGAGCAGCGG
CAAGTTTGCCAGCAACTTCGATGTGCCCACCAACAGTACGCTGCTGGATG
CCAATCAGGCCTCGACATCGAAGGCAGCGGCCAAGGCGCAAGCATCTGAG
GAAGAGGGCATGGCTGTGGCCAAATACAGTGGCGCTGAGAACGGAAACAA
CCGCGATACCAACAACAGTCAACTCCTCAGGATGGCCTCAGTTGACGAAC
TCCACGGGCACTTGGAAAGCATGCAAGATGAGTTGGAAACACTGAAGGAT
CTGCTGCGTGGCGATGGGGTGGCCATTGATCAGAACATGCTCATGGGTCT
GTTTAACGACTCTGATCTAATGGACAACTATGGCCTATCGTTTCCCAATG
ACAGCATAAGCAGTGAAAAGAAAGCACCCAGTGGCTCTGAACTGATTTCC
TATCAGCCCATGTATGATCTGTCCGACATTTTGGACACGGACGATGGCAA
CAATGACCAGGAGGCCAGCAGGCGCCAGATGCAGACGCAAAGTTCGGTTT
TAAATACGCCACGTCACGAGTTG

KHBD00642.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:06:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14018909..14020057 1468..320 5730 99.9 Minus
chr2R 21145070 chr2R 14018576..14018850 1742..1468 1330 98.9 Minus
chr2R 21145070 chr2R 14020993..14021203 211..1 1055 100 Minus
chr2R 21145070 chr2R 14017874..14018024 2073..1923 755 100 Minus
chr2R 21145070 chr2R 14018398..14018503 1848..1743 530 100 Minus
chr2R 21145070 chr2R 14020126..14020236 319..209 510 97.3 Minus
chr2R 21145070 chr2R 14018086..14018161 1924..1849 380 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18131793..18132941 1468..320 5745 100 Minus
2R 25286936 2R 18131460..18131734 1742..1468 1375 100 Minus
2R 25286936 2R 18133870..18134080 211..1 1055 100 Minus
2R 25286936 2R 18130758..18130908 2073..1923 755 100 Minus
2R 25286936 2R 18133004..18133114 319..209 555 100 Minus
2R 25286936 2R 18131282..18131387 1848..1743 530 100 Minus
2R 25286936 2R 18130970..18131045 1924..1849 380 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18132992..18134140 1468..320 5745 100 Minus
2R 25260384 2R 18132659..18132933 1742..1468 1375 100 Minus
2R 25260384 2R 18135069..18135279 211..1 1055 100 Minus
2R 25260384 2R 18131957..18132107 2073..1923 755 100 Minus
2R 25260384 2R 18134203..18134313 319..209 555 100 Minus
2R 25260384 2R 18132481..18132586 1848..1743 530 100 Minus
2R 25260384 2R 18132169..18132244 1924..1849 380 100 Minus
Blast to na_te.dros performed on 2019-03-15 11:06:46 has no hits.

KHBD00642.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:08:17 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14018576..14018850 1468..1742 98 <- Minus
chr2R 14017874..14018022 1925..2073 100 <- Minus
chr2R 14018086..14018161 1849..1924 100 <- Minus
chr2R 14018398..14018503 1743..1848 100 <- Minus
chr2R 14018910..14020057 320..1467 99 <- Minus
chr2R 14020126..14020234 211..319 97 <- Minus
chr2R 14020994..14021203 1..210 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-21 15:20:25 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 1..2073 1..2073 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:35:51 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 1..2073 1..2073 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:22:14 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 1..2073 1..2073 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 15:20:25 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 241..2313 1..2073 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:35:51 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 244..2316 1..2073 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:14 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
Hsf-RA 244..2316 1..2073 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:08:17 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18130758..18130906 1925..2073 100 <- Minus
2R 18130970..18131045 1849..1924 100 <- Minus
2R 18131282..18131387 1743..1848 100 <- Minus
2R 18131460..18131734 1468..1742 100 <- Minus
2R 18131794..18132941 320..1467 100 <- Minus
2R 18133004..18133112 211..319 100 <- Minus
2R 18133871..18134080 1..210 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:08:17 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18130758..18130906 1925..2073 100 <- Minus
2R 18130970..18131045 1849..1924 100 <- Minus
2R 18131282..18131387 1743..1848 100 <- Minus
2R 18131460..18131734 1468..1742 100 <- Minus
2R 18131794..18132941 320..1467 100 <- Minus
2R 18133004..18133112 211..319 100 <- Minus
2R 18133871..18134080 1..210 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:08:17 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18130758..18130906 1925..2073 100 <- Minus
2R 18130970..18131045 1849..1924 100 <- Minus
2R 18131282..18131387 1743..1848 100 <- Minus
2R 18131460..18131734 1468..1742 100 <- Minus
2R 18131794..18132941 320..1467 100 <- Minus
2R 18133004..18133112 211..319 100 <- Minus
2R 18133871..18134080 1..210 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:35:51 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14018263..14018411 1925..2073 100 <- Minus
arm_2R 14018475..14018550 1849..1924 100 <- Minus
arm_2R 14018787..14018892 1743..1848 100 <- Minus
arm_2R 14018965..14019239 1468..1742 100 <- Minus
arm_2R 14019299..14020446 320..1467 100 <- Minus
arm_2R 14020509..14020617 211..319 100 <- Minus
arm_2R 14021376..14021585 1..210 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:30:18 Download gff for KHBD00642.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18132659..18132933 1468..1742 100 <- Minus
2R 18132993..18134140 320..1467 100 <- Minus
2R 18134203..18134311 211..319 100 <- Minus
2R 18135070..18135279 1..210 100   Minus
2R 18131957..18132105 1925..2073 100 <- Minus
2R 18132169..18132244 1849..1924 100 <- Minus
2R 18132481..18132586 1743..1848 100 <- Minus

KHBD00642.pep Sequence

Translation from 0 to 2073

> KHBD00642.pep
MSRSRSSAKAVQFKHESEEEEEDEEEQLPSRRMHSYGDAAAIGSGVPAFL
AKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASF
IRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKIS
NNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWRE
IASLRQKHAKQQQIVNKLIQFLITIVQPSRNMSGVKRHVQLMINNTPEID
RARTTSETESESGGGPVIHELREELLDEVMNPSPAGYTAASHYDQESVSP
PAVERPRSNMSISSHNVDYSNQSVEDLLLQGNGTAGGNILVGGAASPMAQ
SVSQSPAQHDVYTVTEAPDSHVQEVPNSPPYYEEQNVLTTPMVREQEQQK
RQQLKENNKLRRQAGDVILDAGDILVDSSSPKAQRTSIQHSTQPDVMVQP
MIIKSEPENSSGLMDLMTPANDLYSVNFISEDMPTDIFEDALLPDGVEEA
AKLDQQQKFGQSTVSSGKFASNFDVPTNSTLLDANQASTSKAAAKAQASE
EEGMAVAKYSGAENGNNRDTNNSQLLRMASVDELHGHLESMQDELETLKD
LLRGDGVAIDQNMLMGLFNDSDLMDNYGLSFPNDSISSEKKAPSGSELIS
YQPMYDLSDILDTDDGNNDQEASRRQMQTQSSVLNTPRHEL

KHBD00642.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:11:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12282-PA 706 GF12282-PA 1..706 1..691 2569 73.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20992-PA 709 GG20992-PA 1..709 1..691 3254 90 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20850-PA 741 GH20850-PA 1..740 1..690 1989 59.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:50
Subject Length Description Subject Range Query Range Score Percent Strand
Hsf-PA 691 CG5748-PA 1..691 1..691 3526 100 Plus
Hsf-PC 709 CG5748-PC 1..709 1..691 3497 97.5 Plus
Hsf-PB 715 CG5748-PB 1..715 1..691 3491 96.6 Plus
Hsf-PD 733 CG5748-PD 1..733 1..691 3462 94.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20955-PA 727 GI20955-PA 1..727 1..691 2007 61.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:11:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10516-PA 699 GL10516-PA 1..699 1..691 2290 69.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:11:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19104-PA 702 GA19104-PA 1..702 1..691 2290 69.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19926-PA 709 GM19926-PA 1..709 1..691 3544 94.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:11:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25415-PA 244 GD25415-PA 1..240 1..255 1263 92.5 Plus
Dsim\Hsf-PA 202 GD20440-PA 1..151 467..616 662 96.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:11:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20676-PA 738 GJ20676-PA 1..738 1..691 2076 61 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:12:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19495-PA 692 GK19495-PA 1..691 1..690 1797 59.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:12:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Hsf-PA 708 GE13935-PA 1..708 1..691 3254 90.6 Plus

KHBD00642.hyp Sequence

Translation from 1 to 2073

> KHBD00642.hyp
MSRSRSSAKAVQFKHESEEEEEDEEEQLPSRRMHSYGDAAAIGSGVPAFL
AKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASF
IRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKIS
NNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWRE
IASLRQKHAKQQQIVNKLIQFLITIVQPSRNMSGVKRHVQLMINNTPEID
RARTTSETESESGGGPVIHELREELLDEVMNPSPAGYTAASHYDQESVSP
PAVERPRSNMSISSHNVDYSNQSVEDLLLQGNGTAGGNILVGGAASPMAQ
SVSQSPAQHDVYTVTEAPDSHVQEVPNSPPYYEEQNVLTTPMVREQEQQK
RQQLKENNKLRRQAGDVILDAGDILVDSSSPKAQRTSIQHSTQPDVMVQP
MIIKSEPENSSGLMDLMTPANDLYSVNFISEDMPTDIFEDALLPDGVEEA
AKLDQQQKFGQSTVSSGKFASNFDVPTNSTLLDANQASTSKAAAKAQASE
EEGMAVAKYSGAENGNNRDTNNSQLLRMASVDELHGHLESMQDELETLKD
LLRGDGVAIDQNMLMGLFNDSDLMDNYGLSFPNDSISSEKKAPSGSELIS
YQPMYDLSDILDTDDGNNDQEASRRQMQTQSSVLNTPRHEL

KHBD00642.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:00
Subject Length Description Subject Range Query Range Score Percent Strand
Hsf-PA 691 CG5748-PA 1..691 1..691 3526 100 Plus
Hsf-PC 709 CG5748-PC 1..709 1..691 3497 97.5 Plus
Hsf-PB 715 CG5748-PB 1..715 1..691 3491 96.6 Plus
Hsf-PD 733 CG5748-PD 1..733 1..691 3462 94.3 Plus