BDGP Sequence Production Resources |
Search the DGRC for KHBD00647
Library: | KHBD |
Tissue Source: | |
Created by: | |
Date Registered: | 2011-09-07 |
Comments: | |
Original Plate Number: | 10 |
Well: | 32 |
Vector: | pDONR221 |
Associated Gene/Transcript | ara-RB |
Protein status: | KHBD00647.pep: Inserted from web |
Sequenced Size: | Not sequenced |
2127 bp (2127 high quality bases) assembled on 2011-07-12
> KHBD00647.complete ATGGCTGCCTACACACAATTCGGATACGGAGGCTTTCCGTCGGCCTCGCA GCTCCTGCCACCGAGTGTCCAGACGACGGAGGACGCTTCCGCGAACGTGA ATGTGAATGTGAACGAGGCGCTGGTGATGACAAACGCCCCGGCGATGAGC CCCACGGGAGGTCAGGATTGTCAGGGTAGCCAGCCGTCGGGCGGCGCTGG CGGAGATGCCTCCTCGGGGGCGCTGAGTCCCAATGCGCTTTCGCAGAACT CGAATGCGGCGACGGTGGTTGGAGCAGGTGGTGGATCCTCGGCGGGCGGA GGAGGTCCAGCGGATCTGGCCACCGGTGGCTCCCTGGACGGCAACGGCGT GGGCACGACGCCCACTGCTGGTGGTGCTGGTGGTGGTGGATCATGCTGTG AGAACGGGCGGCCCATAATGACCGACCCGGTGTCGGGTCAGACGGTCTGC TCCTGCCAGTACGATTCCGCCCGCCTCGCCCTCTCCAGCTACTCCCGTCT ACCGGCGGCCAGCGTTGGCGTCTATGGAACGCCGTACCCCTCAACGGACC AGAATCCCTACCAGAGCATCGGAGTGGACAGCTCCGCCTTCTATTCGCCG CTGAGCAATCCGTACGGACTTAAGGATACGGGCGCGGGTCCGGAAATGGG AGCTTGGACCTCGGCTGGACTTCAGCCCACTACGGGCTACTACTCCTACG ATCCCATGTCGGCCTACGGCTATGGAGCCAGTTACGACCTGGCTGCTCGT CGCAAAAATGCCACGCGGGAATCCACGGCCACATTGAAGGCCTGGCTAAA TGAGCACAAGAAGAATCCGTATCCCACAAAGGGTGAGAAGATCATGCTGG CCATCATCACCAAGATGACCCTCACCCAGGTGTCCACTTGGTTCGCCAAT GCGCGTCGGCGACTGAAGAAGGAGAACAAGATGACGTGGGAGCCCAAGAA TCGCACAGATGACGATGATGACGCCTTGGTGTCGGACGATGAGAAGGACA AGGAGGATCTGGAGCCGAGTAAGGGCAGCCAGGGCAGTGTCAGTTTGGCC AAAGATGAGACCAAAGAGGAGGAGGATGCCATAGATGAGGACCAAAAGTG CCTCGGTCAGGCGAACATACTGCGCGCCGGCTTTGGTTATCCCTCAGCCG GAAGTGGTAGTGGTGGTTACCCCGGCGGAGGTGGCTCCTCCAGTGGCCAC CCCGGTGGCTACCATCCGTATCATCATCAGCATCCCGCTTACTATCAGGC TGGCCAGCAGGGCGGTATGTTGCCATTTCATGGGGAGAACTCCAAACTGC AGACGGATCTTGGGGATCCAAAAAACCAGCTAGGCCGGGACTGTGGCGTG CCGATTCCAGCTACCAAGCCGAAGATCTGGAGTCTGGCCGACACAGTTGG CTGCAAGACACCGCCGCCGGCTTACATGGGTCACCAATCGATGCCTCTGC AGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGCGCAGCACCAGTAT CCTCCATCGGAGGCAGGACGAGATCAACAGCTGTTCAATGGGGCCGCAGC TCCATACCTGAGGCCGCACACCACGGCCTACGGGGGTTTTCTAGGGGCTA CGACCCAGCAACTGCATACTACGAACAACAGTATCCCCTACAGCAATATG CCCCCGCAGCAGCAGCAGCCGCAGCAGCAGCAGCAGCAGTTGCAGCAGGG CGGTACCATCCATACTACGGGAAGTTCGAGCGGACCAATAATACCGCTGC AGTTCCACAATCGGCATCCGCAGCAGCAGCAGCAACTGCAGCAGCAATCT CAATCCACAGCGAGTCAGCGGGCGATGGGGTTTCTCGAAGCCCAACCAGA TACTCCACCCCAAACTCCGCCGAATATGAAGGTGCTGAGCGGAGCTTTGA GTCTCCTGCCTACCGCTACTCAAGTCCCTATGACCGCTACCTGTCGCAGT AGTAACGCCTTTGGCTTCCCCGCCAGCGGTTACCCGATGAATTTCTCGGC CAGATTGGGGGAGTATTCGCCGCGTGATGATTACAGCAGCGGGAACAGCA GCAGCAGCAGCTCCTCATCGCCGCAGCTGCAAAGGAATGAGGCCATGTTC AAGCCGCTCTTCAAGAAGTTCACCAAC
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12585065..12586142 | 1053..2127 | 5185 | 99.1 | Plus |
chr3L | 24539361 | chr3L | 12576245..12576797 | 48..603 | 2685 | 99.3 | Plus |
chr3L | 24539361 | chr3L | 12584669..12585004 | 719..1054 | 1680 | 100 | Plus |
chr3L | 24539361 | chr3L | 12608854..12609098 | 760..1004 | 850 | 89.8 | Plus |
chr3L | 24539361 | chr3L | 12697816..12698026 | 760..970 | 590 | 85.3 | Plus |
chr3L | 24539361 | chr3L | 12580009..12580125 | 603..719 | 585 | 100 | Plus |
chr3L | 24539361 | chr3L | 12571609..12571659 | 1..51 | 255 | 100 | Plus |
chr3L | 24539361 | chr3L | 12610445..12610543 | 1320..1418 | 210 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12594584..12595658 | 1053..2127 | 5375 | 100 | Plus |
3L | 28110227 | 3L | 12585738..12586293 | 48..603 | 2765 | 99.8 | Plus |
3L | 28110227 | 3L | 12594188..12594523 | 719..1054 | 1680 | 100 | Plus |
3L | 28110227 | 3L | 12618382..12618626 | 760..1004 | 850 | 89.8 | Plus |
3L | 28110227 | 3L | 12707412..12707622 | 760..970 | 590 | 85.3 | Plus |
3L | 28110227 | 3L | 12589518..12589634 | 603..719 | 585 | 100 | Plus |
3L | 28110227 | 3L | 12581103..12581153 | 1..51 | 255 | 100 | Plus |
3L | 28110227 | 3L | 12619948..12620046 | 1320..1418 | 210 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12587684..12588758 | 1053..2127 | 5375 | 100 | Plus |
3L | 28103327 | 3L | 12578838..12579393 | 48..603 | 2765 | 99.8 | Plus |
3L | 28103327 | 3L | 12587288..12587623 | 719..1054 | 1680 | 100 | Plus |
3L | 28103327 | 3L | 12611482..12611726 | 760..1004 | 850 | 89.7 | Plus |
3L | 28103327 | 3L | 12700512..12700722 | 760..970 | 590 | 85.3 | Plus |
3L | 28103327 | 3L | 12582618..12582734 | 603..719 | 585 | 100 | Plus |
3L | 28103327 | 3L | 12574203..12574253 | 1..51 | 255 | 100 | Plus |
3L | 28103327 | 3L | 12613048..12613146 | 1320..1418 | 210 | 80.8 | Plus |
3L | 28103327 | 3L | 12610161..12610253 | 388..480 | 165 | 78.4 | Plus |
3L | 28103327 | 3L | 12610299..12610378 | 514..593 | 160 | 80 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12571609..12571659 | 1..51 | 100 | -> | Plus |
chr3L | 12576249..12576797 | 52..603 | 99 | -> | Plus |
chr3L | 12580010..12580125 | 604..719 | 100 | -> | Plus |
chr3L | 12584670..12585004 | 720..1054 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 1..2127 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 1..2127 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 1..2127 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 430..2556 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 432..2558 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ara-RB | 432..2558 | 1..2127 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12581103..12581153 | 1..51 | 100 | -> | Plus |
3L | 12585742..12586293 | 52..603 | 99 | -> | Plus |
3L | 12589519..12589634 | 604..719 | 100 | -> | Plus |
3L | 12594189..12594523 | 720..1054 | 100 | -> | Plus |
3L | 12594586..12595658 | 1055..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12581103..12581153 | 1..51 | 100 | -> | Plus |
3L | 12585742..12586293 | 52..603 | 99 | -> | Plus |
3L | 12589519..12589634 | 604..719 | 100 | -> | Plus |
3L | 12594189..12594523 | 720..1054 | 100 | -> | Plus |
3L | 12594586..12595658 | 1055..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12581103..12581153 | 1..51 | 100 | -> | Plus |
3L | 12585742..12586293 | 52..603 | 99 | -> | Plus |
3L | 12589519..12589634 | 604..719 | 100 | -> | Plus |
3L | 12594189..12594523 | 720..1054 | 100 | -> | Plus |
3L | 12594586..12595658 | 1055..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12574203..12574253 | 1..51 | 100 | -> | Plus |
arm_3L | 12578842..12579393 | 52..603 | 99 | -> | Plus |
arm_3L | 12582619..12582734 | 604..719 | 100 | -> | Plus |
arm_3L | 12587289..12587623 | 720..1054 | 100 | -> | Plus |
arm_3L | 12587686..12588758 | 1055..2127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12578842..12579393 | 52..603 | 99 | -> | Plus |
3L | 12582619..12582734 | 604..719 | 100 | -> | Plus |
3L | 12587289..12587623 | 720..1054 | 100 | -> | Plus |
3L | 12587686..12588758 | 1055..2127 | 100 | Plus | |
3L | 12574203..12574253 | 1..51 | 100 | -> | Plus |
Translation from 0 to 2127
> KHBD00647.pep MAAYTQFGYGGFPSASQLLPPSVQTTEDASANVNVNVNEALVMTNAPAMS PTGGQDCQGSQPSGGAGGDASSGALSPNALSQNSNAATVVGAGGGSSAGG GGPADLATGGSLDGNGVGTTPTAGGAGGGGSCCENGRPIMTDPVSGQTVC SCQYDSARLALSSYSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSP LSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGYGASYDLAAR RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN ARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLA KDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGH PGGYHPYHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGV PIPATKPKIWSLADTVGCKTPPPAYMGHQSMPLQQQQQQQQQQQQAQHQY PPSEAGRDQQLFNGAAAPYLRPHTTAYGGFLGATTQQLHTTNNSIPYSNM PPQQQQPQQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHPQQQQQLQQQS QSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSLLPTATQVPMTATCRS SNAFGFPASGYPMNFSARLGEYSPRDDYSSGNSSSSSSSSPQLQRNEAMF KPLFKKFTN
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24688-PA | 731 | GF24688-PA | 1..731 | 1..709 | 2224 | 70.6 | Plus |
Dana\GF24689-PA | 663 | GF24689-PA | 1..490 | 1..482 | 1085 | 52 | Plus |
Dana\GF24692-PA | 661 | GF24692-PA | 46..343 | 57..334 | 507 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15584-PA | 727 | GG15584-PA | 1..727 | 1..709 | 3488 | 93.6 | Plus |
Dere\GG15585-PA | 813 | GG15585-PA | 155..622 | 44..489 | 898 | 48.7 | Plus |
Dere\GG15588-PA | 641 | GG15588-PA | 119..332 | 132..334 | 502 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14715-PA | 791 | GH14715-PA | 1..788 | 1..708 | 1891 | 63 | Plus |
Dgri\GH14716-PA | 733 | GH14716-PA | 1..506 | 1..482 | 1068 | 51.1 | Plus |
Dgri\GH14720-PA | 669 | GH14720-PA | 71..525 | 75..532 | 519 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ara-PB | 709 | CG10571-PB | 1..709 | 1..709 | 3781 | 100 | Plus |
ara-PA | 717 | CG10571-PA | 1..717 | 1..709 | 3762 | 98.9 | Plus |
caup-PA | 693 | CG10605-PA | 1..609 | 1..630 | 1301 | 46.4 | Plus |
mirr-PB | 641 | CG10601-PB | 47..473 | 47..485 | 619 | 40.4 | Plus |
mirr-PA | 641 | CG10601-PA | 47..473 | 47..485 | 619 | 40.4 | Plus |
mirr-PC | 682 | CG10601-PC | 47..473 | 47..485 | 619 | 40.4 | Plus |
Vsx1-PB | 837 | CG4136-PB | 190..701 | 27..519 | 188 | 22.2 | Plus |
Vsx1-PA | 837 | CG4136-PA | 190..701 | 27..519 | 188 | 22.2 | Plus |
Smr-PG | 3607 | CG4013-PG | 127..309 | 479..662 | 170 | 30.8 | Plus |
Atx2-PA | 888 | CG5166-PA | 361..595 | 381..601 | 164 | 30.1 | Plus |
Atx2-PD | 1023 | CG5166-PD | 361..595 | 381..601 | 164 | 30.1 | Plus |
Atx2-PC | 1023 | CG5166-PC | 361..595 | 381..601 | 164 | 30.1 | Plus |
Atx2-PB | 1084 | CG5166-PB | 422..656 | 381..601 | 164 | 30.1 | Plus |
pros-PK | 1535 | CG17228-PK | 1020..1256 | 403..643 | 163 | 28.5 | Plus |
pros-PI | 1835 | CG17228-PI | 1320..1556 | 403..643 | 163 | 28.5 | Plus |
CG32532-PD | 688 | CG32532-PD | 106..314 | 482..700 | 161 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12261-PA | 745 | GI12261-PA | 1..743 | 1..709 | 2044 | 66.4 | Plus |
Dmoj\GI12262-PA | 718 | GI12262-PA | 1..523 | 1..482 | 1087 | 50.3 | Plus |
Dmoj\GI12266-PA | 735 | GI12266-PA | 153..483 | 132..464 | 499 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25202-PA | 473 | GL25202-PA | 1..446 | 1..424 | 1504 | 78.8 | Plus |
Dper\GL25204-PA | 688 | GL25204-PA | 1..475 | 1..482 | 1011 | 51.4 | Plus |
Dper\GL25205-PA | 639 | GL25205-PA | 109..436 | 125..464 | 512 | 43.3 | Plus |
Dper\GL25203-PA | 209 | GL25203-PA | 154..209 | 652..709 | 184 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10403-PA | 780 | GA10403-PA | 1..780 | 1..709 | 2138 | 70.4 | Plus |
Dpse\GA10434-PA | 682 | GA10434-PA | 1..473 | 1..482 | 1077 | 52.6 | Plus |
Dpse\GA10430-PA | 639 | GA10430-PA | 109..436 | 125..464 | 512 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25355-PA | 384 | GM25355-PA | 1..367 | 1..367 | 1876 | 98.1 | Plus |
Dsec\GM25358-PA | 680 | GM25358-PA | 1..483 | 1..482 | 980 | 50.1 | Plus |
Dsec\GM25356-PA | 159 | GM25356-PA | 1..159 | 550..709 | 759 | 95.7 | Plus |
Dsec\GM25364-PA | 547 | GM25364-PA | 25..238 | 132..334 | 492 | 50.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14388-PA | 597 | GD14388-PA | 89..597 | 202..709 | 2604 | 96.9 | Plus |
Dsim\GD14390-PA | 687 | GD14390-PA | 1..489 | 1..482 | 992 | 49.4 | Plus |
Dsim\GD14396-PA | 641 | GD14396-PA | 119..332 | 132..334 | 501 | 50.9 | Plus |
Dsim\GD14388-PA | 597 | GD14388-PA | 1..88 | 1..88 | 434 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11492-PA | 756 | GJ11492-PA | 1..753 | 1..708 | 1986 | 65.8 | Plus |
Dvir\GJ11493-PA | 698 | GJ11493-PA | 1..632 | 1..629 | 1128 | 45.7 | Plus |
Dvir\GJ11496-PA | 575 | GJ11496-PA | 170..499 | 132..464 | 507 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10560-PA | 736 | GK10560-PA | 1..736 | 1..709 | 2102 | 64.1 | Plus |
Dwil\GK10562-PA | 661 | GK10562-PA | 1..474 | 1..485 | 1028 | 50.3 | Plus |
Dwil\GK25452-PA | 620 | GK25452-PA | 104..499 | 132..538 | 523 | 40.3 | Plus |
Dwil\GK10561-PA | 167 | GK10561-PA | 59..167 | 607..709 | 277 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21912-PA | 719 | GE21912-PA | 1..719 | 1..709 | 3522 | 95.3 | Plus |
Dyak\GE21913-PA | 689 | GE21913-PA | 1..490 | 1..482 | 1002 | 49.6 | Plus |
Dyak\GE21915-PA | 642 | GE21915-PA | 120..333 | 132..334 | 502 | 51.7 | Plus |
Translation from 1 to 2127
> KHBD00647.hyp MAAYTQFGYGGFPSASQLLPPSVQTTEDASANVNVNVNEALVMTNAPAMS PTGGQDCQGSQPSGGAGGDASSGALSPNALSQNSNAATVVGAGGGSSAGG GGPADLATGGSLDGNGVGTTPTAGGAGGGGSCCENGRPIMTDPVSGQTVC SCQYDSARLALSSYSRLPAASVGVYGTPYPSTDQNPYQSIGVDSSAFYSP LSNPYGLKDTGAGPEMGAWTSAGLQPTTGYYSYDPMSAYGYGASYDLAAR RKNATRESTATLKAWLNEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFAN ARRRLKKENKMTWEPKNRTDDDDDALVSDDEKDKEDLEPSKGSQGSVSLA KDETKEEEDAIDEDQKCLGQANILRAGFGYPSAGSGSGGYPGGGGSSSGH PGGYHPYHHQHPAYYQAGQQGGMLPFHGENSKLQTDLGDPKNQLGRDCGV PIPATKPKIWSLADTVGCKTPPPAYMGHQSMPLQQQQQQQQQQQQAQHQY PPSEAGRDQQLFNGAAAPYLRPHTTAYGGFLGATTQQLHTTNNSIPYSNM PPQQQQPQQQQQQLQQGGTIHTTGSSSGPIIPLQFHNRHPQQQQQLQQQS QSTASQRAMGFLEAQPDTPPQTPPNMKVLSGALSLLPTATQVPMTATCRS SNAFGFPASGYPMNFSARLGEYSPRDDYSSGNSSSSSSSSPQLQRNEAMF KPLFKKFTN
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ara-PB | 709 | CG10571-PB | 1..709 | 1..709 | 3781 | 100 | Plus |
ara-PA | 717 | CG10571-PA | 1..717 | 1..709 | 3762 | 98.9 | Plus |
caup-PA | 693 | CG10605-PA | 1..609 | 1..630 | 1301 | 46.4 | Plus |
mirr-PB | 641 | CG10601-PB | 47..473 | 47..485 | 619 | 40.4 | Plus |
mirr-PA | 641 | CG10601-PA | 47..473 | 47..485 | 619 | 40.4 | Plus |