Clone LD01189 Report

Search the DGRC for LD01189

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:11
Well:89
Vector:pBS SK-
Associated Gene/TranscriptCG7337-RA
Protein status:LD01189.pep: gold
Preliminary Size:5961
Sequenced Size:6066

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7337 2002-05-17 Blastp of sequenced clone
CG7337 2003-01-01 Sim4 clustering to Release 3
CG7337 2008-04-29 Release 5.5 accounting
CG7337 2008-08-15 Release 5.9 accounting
CG7337 2008-12-18 5.12 accounting

Clone Sequence Records

LD01189.complete Sequence

6066 bp (6066 high quality bases) assembled on 2002-05-17

GenBank Submission: AY118891

> LD01189.complete
AAGAAGTTCAAAGCCAAAGTCCCTCTGCGCGCGGGTGTGTGTGTGTGTGT
TTGTTTTCACGTGTGCGTGTGCCTGTGTGCGACGCTCGCGAAAATCGTCG
GTGTGTGCGTGCGTGTGCTTGTTGTTTTTGTCAGTTGTTGTTAGTGCACC
TGTCTGCAAATAAAAGCAAGAGACACGGCCAAAACCATAACAACAAACGA
AACAGAAGAGCCGACTGCAAGTGAGAGCAGCAAAACGGAAAGAACGGACG
CCGGCGAAGAAAGAAAGCAGCAGGAGCCACTCAAAAAAAAAAAAAAATCC
AAAAAATCCAGTTTCCAAGGAGTTTCCTCGCTCAGAATGCTGTCCACTTA
GGCAAGAGCCAATTGCCACCTATGCTTCCGTCGTTAAACTAATAAAAATT
CAATACTTGCCATAAAATTATAAAGTATTCAAGTAAATCTACAAGAAACT
GCCAAATTTTGAAGCCAAATGCAGTCAGCCCTAAAGTATGCAGTGGATTT
TGTAAGCTTCGAGTGCAACTCAAGGCTCATTTTCTGAGCTCAACTAAATG
CTCAAAGCTACACTCAGCGGAGTCATCCACCGACCGTCGCTCGCGTATAA
GTGATACGCGCTGGTTCGAAACCCCGCTGGAGAGCGGTGAGCGACGCAAT
TTCTAAAAACAACCATGGACGCTCCAGATGTGGGACGCATTATAAGGGCG
CCGGCGAGGCGCAAACGGAACGATGAACAGTTAATGGATAGGATAAAACT
CAAAAAGGTCCTGGGCCTCACCGTGTGCAGCAATGCGGCTCTGGATGTGT
CCCCAGTCAGCGGCCTGCTGGCCTATCCAGCTGGCTGCACCGTGGTGCTC
TTCAACGCAAAACGCCAGACACAGGCCTACCTGGTCAACACCTCCCGCAA
AGCATTCACATCCGTGGCGTTCTCCCGGTGTGGTCGCTACGTGGCCACCG
GGGAGTGTGGCATCAATCCGGCCATCAAGGTCTGGGAGCTGGAGACTCCG
AACGGAAGTCTGGAGCACTGCAGCGGCGGCAGTGTTGTTGCAGAGTTTGT
GGACCACAAATACGCCGTCACTTGTGTGGCCTTTTCGCCCACTGGCAAGT
ACCTGGTTTCGGTGGGCTCCCAGCACGACATGATTGTGAATGTGTTCGAC
TGGCGGGCCAACCTCAAGATGGCCTCGAATAAAATCAGCTCCAAGGTGGC
TGCCGTGTGCTTTTCCGAGGATGGCAGCTATTTTGTGACCGTGGGTAATC
GCCACGTGAAATACTGGTATCTAGAGGGTGGCAGAAAGTACAAGGATCCT
ATTCCCCTGATGGGTCGCAGCGCCATTCTGGGCGATTTGCGGGACAACGA
CTTTTGTGCGGTGGCGTGCGGCAAGGGGATCTGTGCGGAGAGCACGTACG
CCATCACGCGGCAAGGACACTTGGTGGAGTTCAGCTCCCGCCGCCTGCTC
GACAAGTGGGTGCAGTGCCGCACCACCAATGCCAACTGTATCTGCGTGAA
TGAGAGGTTCATTCTCGTGGGGTGTGCGGAGTCCATCATTCGCATCTTCA
ATTCGGCCACGCTGGAATACGTGACCACTCTGCCTAGAACTCATTACTTG
GGCGTGGATGTGGCCCAGGGCATCCAGATCAACCACATCATGTCGGTGCC
ACAGCAGGCCAAGTTCCCCGACTGCATTGCCATGGTGTTCGACGAACAGC
GTTCGAAGGTGAGTTGCGTTTACAACGATCACTCTCTTTACATCTGGGAT
CTGCGCGACATCTCACGAGTGGGCAAGTCGCACTCGTTCCTTTATCACTC
CACTTGCATCTGGGGCGTGGAGACAGTGCCATATAACGTGGAGCGGGAGC
CATCGCAAACCCTTCCAGAGGAATGCTTCGTCACCTGCTCGTCGGACGAC
ACGATCCGTGTCTGGGGTTTGGACGGATGCACCAACAACGATATCTACCG
AAGGAACATCTACTCCAAGGAGCTGCTGAAGATCGTCTACAGCGACGATG
AACTGCAGTTTATCAAGGATCAGGGCTCGTCTCTGTTCGACAAAGCTGGA
AACTCCTCCTACGATGGAAGGAATGGAGTGCGGTGCATCAAGATCAGTCC
GGAACTGCAGCACTTGGCAAGTGGAGATCGGTGCGGCAACATACGCGTGT
ACAGTCTGGTCAATCTGCGCCTGCTCACCACCATCGAAGCCCATGAGTCT
GAGGTGCTTTGTTTGGAGTATTCCAACGAGAAGATCGAGCGAAAGTTGTT
GGCCAGTGCCAGTAGGGATCGGCTGATCCATGTGTTCGACGTGGCGCAGA
ATTATCTACTGCTACAAACGCTGGACGATCACAGCTCCTCCATCACCTCC
ATCAAGTTTGTAGGTGCAGGACTTAACTTCCAGATGATCAGTTGTGGCGC
CGACAAGTCCATTATGTTTAGGAGTTTTCAGGGAAATATTTTCATGAGGG
GCACCAACACCTCAGGAAAGACGACGTTGTACGACATGGAGGTGGACTCG
AATGCCAAGCACATTTTGACAGCCTGCCAGGATCGCAACGTGCGGGTTTA
CGGAACCCAGAATGCCAAGCAAACAAAGACCTTCAAGGGCTCTCATTCAG
ACGAAGGAAGTCTGATCAAACTCAGTCTCGATCCCAGTGGCATCTATGTG
GCCACTTCCTGCACGGATAAAACGCTTGCTGTTTATGATTACTACTCGAA
CGAGTGCATGGCAAGGATGTACGGTCACAGCGAGTTGGTCACGGGACTTA
AGTTCACCAACGATTGCAGACATTTAATTTCCGCAAGTGGCGACGGTTGC
ATTTTCATATGGCAAGTGCCACACGATATGATAGTGACCATGCAGGCCAG
GATGTCGCAACAGCGTCTCAGATCTGGGCATGCTCCATTGCCGCGACCCT
TGGCTCCTATTTCGCCACCGGATGGTATTGTCCTGGAATCGCCAACCAGT
GAAATAGAGCAGCCGCAATTGCAGCCCAAGTTTGGAGTGGCCGAAAGGTT
TTCCGATGTGGGTCAACTGCCTCAGTGGGCGATGCGAAAAGCAGCTGCCG
ATTCGGATAGTGGGGCCTTATCCATACCCACGCCCAGTGGTGGATCTGCG
ACTGTGCCTGGCATGCATGCTGCTTCATCGATGGGAAATCTAAGCTCATC
GCCCAGTCAACAGATGACAGGACTGGCACCACGGGCCAGGGGAAGATGGG
CCCAAAGGAGCACTCAGTTGGAAACGGCCGATGACCTGCGTTCCAACTCC
GAAAGTCCTCTGGGAACCGTTTCGTCTGTAGGTGGTCACAGCGGTGTGAA
TGTCCAGACTTCTGATTACAATAGTGCCTCTTCCAAGGACATTACGTACA
ATCAAACCTACTTGAGTGAGGACTCCTCCATCGATTCGGGAATGGAGACG
CGAAGGGGCGAACTCAAGTTTATTGGCAGCAGCAACAATGGAACGGTGGT
CACTGTGTCCTCCGTTTCCTCGATTGCTGTTTCTGCCTCCAACGGTGCCA
TGTCAACGGGTTCTGGAGCTGCCCAACAGCGTCTCCAGTTGCCGGATAAA
CGGTTAAAGCCGGGTCTGCGATTCGATACCCATACCCATGATCACGATGG
GGATGTGGAGGACATCTCCGATGGAGAGAGAACTAGCTCCGATCACGGAA
TGTTTTACAACAACCTCGCGCCCAGCACGCCAACAGATTTCAAGGTGACG
GCCATGAACGAGGATGAGCTGCGCAAATCGGTGCGCCGTCAGAAGTTTGA
AAAGTCCGGCCTTCAGCTTACCCCTTCGGCCCTCAGCGGAAACGGAAGTT
CGCATACTGCGAGCACCGGAACTGGGACCTCCGATACCGAAGACGAAGGC
TCCACGCCCAGTGCCGAAAATGCCGAACGGTCGCTGGCCTCGACGTTGGG
TGGCAGCTCGGAGAATCTGCCCCAGAGCAGCACCAACAGCTTCCTGCACG
CCGCTTTGCCAGAGGGACCGGGACTAACAACGCCAATGGAAAGGGGTGGC
AGCAGTCGCCGCAGCATCAGCGCCAAGCACAATACGGAGAATGGGAAAAG
CGTGGCCGCGCCGCCCACCATCACCAAGTCGTATACAAGTACCAAAAAGG
AGGAGCTGTTGCAGGTCATCAACAAGGTCAAGCAGCAGCTGGAGAATGTA
GGCCATAGACCCCTCCGGGGAAGCCATAGCATATCGGACCTCAGTCTGGC
AGCCAACTTGGATGGATCAAGGAATGCGGGCGGAGGACCAGGACGTTACC
AGAAGCCAGGCAATCCCAAAACGCTCAATCCCATGCCCATCGAGGAGTCC
TCCATACGCCGCGCTTGCTCGCTGAGCGACCTGCACATGGGCAACTTTGG
CAAGCCTGGAAAATCGCAGAATGGCACTCCACAGAAGCCGCAGGTCCAGC
ACCGAAATGGAAACGTCTCGCGATCGGCCAGCAAAAGGAACAGTTTGCAG
GGCAAAACTGGGTTGGGTGCCTCCAGCAACTCAATGAATGTTCTCAATCA
GGGCAGCGACTCGGAACCCGAGGATAGCAACCGCTTGCGCAGTGCCAGCA
ACGGACAGGGACGCAGCAACGGACCCATTGCTGCGAATCGCCAGTACAGC
AACAAGATTAACAATGTCAACAACAATCGGCGAAAGACGCCAAACTTTAG
CAGTGCCACGCCCATGCAGGACGACTCCAGCTCCGAGGAGACGCCCAATA
GCACTGTCAACAACAAACCCATTGTGCCACCAAGGCCTAGGAACCTGGCA
TTTGATCACAAGAGCAAACTGATGATCAACAATAGTGGCAGCCCCGGCGG
AAATGCCAAACAGCGGAGCGGAGTGACTTCCACAGAGGATTTTGAGGGCA
CAGATCCTGAAGCCCAAGTACACAATGTGATCAATAAACTTTATACAACC
ACACAGGCAGCTATGCAGCTGCATGCGAATCTAAAGAATACGCTACTGCT
GAAGGAACTGGAGAACGCCCTGATCATGTCCAGGAATATGCTAAGCAGCA
TCACCAATCGACAAGCGGATAAGACGAACAACGGAGGTGGGGGATTAGGA
GTGGGTGGAAGTGGGGGATTGAACCACGATCAGCTGAACGCTGACAACGG
AGACTATCTGATGATGGTCAACAACTGTGCCGATCTTTTGAGCAATTTAC
GCACGAAGCACAAACCCGATGACTGTGAGAATAACTCCTAGTGTGTAGAG
CTTAGGATAGACTAAATGACTAAACGAGGGCAGCGGATCTGCGGGAAGGA
CTAACCAACACCTATTTATTTAACTGAACCCACACACACACAGGCGAACG
GCAAGCAAATTAAACAACCAATCACTAATTTGTAATTAATAAACATTCAC
AGTTGATGTAAATTTATTTTCTTAGCAATTAGTTCAATTTGCGTAGCCGC
TAAGTTTTCTGTTTCGTTTTTGTGCGCGTGTGCATTTCTTTTAACAATAA
TTTATATGTCAACCGATTGCGTTTAGCTTGAATTAAATTCTGTAAATGTT
AAGTTTAATAAGCTTAATAGATTTATGTACGTGTTAAGTGTTATTTGAGT
TTAAGGCGGAATGATACGGAATGACCGGACCGGAGGAGTCGAGCGAATTG
TTACAAAGTGCGCTTAGTCTATGCCTTCTTTCTGTATGATTTATTCTCTC
TTTTTGTTAACGTTCTGTTTGCGAATCACTCCAAATGAAAAAGAAAAGAC
AAAAGTACGAGAAATGTGTGTCAAATTTGAATATTCCAAAATTTCAATTT
ATACCCATATACTATGTATGCCTCTACTCACATTATAATTATATGCATCT
AGACATGCCACAAATGATTATCTGAGAATTGCTTATGTGAAGAATCAAAG
ATATTCAGACGTTTGATCAGAGCAAAGAAATCTATTTCCAATCAATTTGT
TCTGTAATTATTGTGTATTAGTTAATTATTCGATTGTATTTACAACAATT
ATAACACTACCTATAAATATACATATATACCTAGATATGAACTTTAATTA
GTCCTAAAATTTACATTACAATAATTTACAACTAAACAAAATGTAAAAAA
AAAAAAAAAAAAAAAA

LD01189.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG7337.c 6971 CG7337.c 406..6450 1..6045 30225 100 Plus
CG7337-RE 6155 CG7337-RE 8..6052 1..6045 30225 100 Plus
CG7337-RA 6155 CG7337-RA 8..6052 1..6045 30225 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:51:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 1935532..1936787 2429..3684 6235 99.8 Plus
chr2L 23010047 chr2L 1942583..1943618 5010..6044 5055 99.4 Plus
chr2L 23010047 chr2L 1934755..1935480 1707..2432 3480 98.6 Plus
chr2L 23010047 chr2L 1934273..1934696 1287..1710 2060 99.1 Plus
chr2L 23010047 chr2L 1884784..1885117 1..335 1625 99.7 Plus
chr2L 23010047 chr2L 1909491..1909818 332..659 1610 99.4 Plus
chr2L 23010047 chr2L 1936850..1937171 3685..4006 1595 99.7 Plus
chr2L 23010047 chr2L 1933601..1933846 834..1079 1185 98.8 Plus
chr2L 23010047 chr2L 1933914..1934124 1078..1288 1010 98.6 Plus
chr2L 23010047 chr2L 1942049..1942250 4655..4856 1010 100 Plus
chr2L 23010047 chr2L 1942309..1942462 4857..5010 770 100 Plus
chr2L 23010047 chr2L 1941554..1941702 4356..4504 745 100 Plus
chr2L 23010047 chr2L 1937237..1937382 4005..4150 730 100 Plus
chr2L 23010047 chr2L 1938307..1938419 4148..4260 520 97.3 Plus
chr2L 23010047 chr2L 1941378..1941476 4257..4355 495 100 Plus
chr2L 23010047 chr2L 1931868..1931960 742..834 465 100 Plus
chr2L 23010047 chr2L 1909893..1909975 660..742 415 100 Plus
chr2L 23010047 chr2L 1941906..1941981 4580..4655 380 100 Plus
chr2L 23010047 chr2L 1941770..1941845 4505..4580 365 98.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:47:59 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1935736..1936991 2429..3684 6280 100 Plus
2L 23513712 2L 1942784..1943819 5010..6045 5180 100 Plus
2L 23513712 2L 1934959..1935684 1707..2432 3630 100 Plus
2L 23513712 2L 1934477..1934900 1287..1710 2120 100 Plus
2L 23513712 2L 1884984..1885318 1..335 1675 100 Plus
2L 23513712 2L 1909665..1909992 332..659 1640 100 Plus
2L 23513712 2L 1937054..1937375 3685..4006 1610 100 Plus
2L 23513712 2L 1933805..1934050 834..1079 1230 100 Plus
2L 23513712 2L 1934118..1934328 1078..1288 1055 100 Plus
2L 23513712 2L 1942250..1942451 4655..4856 1010 100 Plus
2L 23513712 2L 1942510..1942663 4857..5010 770 100 Plus
2L 23513712 2L 1941755..1941903 4356..4504 745 100 Plus
2L 23513712 2L 1937441..1937586 4005..4150 730 100 Plus
2L 23513712 2L 1938508..1938620 4148..4260 565 100 Plus
2L 23513712 2L 1941579..1941677 4257..4355 495 100 Plus
2L 23513712 2L 1932055..1932147 742..834 465 100 Plus
2L 23513712 2L 1910067..1910149 660..742 415 100 Plus
2L 23513712 2L 1941971..1942046 4505..4580 380 100 Plus
2L 23513712 2L 1942107..1942182 4580..4655 380 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:10:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 1935736..1936991 2429..3684 6280 100 Plus
2L 23513712 2L 1942784..1943819 5010..6045 5180 100 Plus
2L 23513712 2L 1934959..1935684 1707..2432 3630 100 Plus
2L 23513712 2L 1934477..1934900 1287..1710 2120 100 Plus
2L 23513712 2L 1884984..1885318 1..335 1675 100 Plus
2L 23513712 2L 1909665..1909992 332..659 1640 100 Plus
2L 23513712 2L 1937054..1937375 3685..4006 1610 100 Plus
2L 23513712 2L 1933805..1934050 834..1079 1230 100 Plus
2L 23513712 2L 1934118..1934328 1078..1288 1055 100 Plus
2L 23513712 2L 1942250..1942451 4655..4856 1010 100 Plus
2L 23513712 2L 1942510..1942663 4857..5010 770 100 Plus
2L 23513712 2L 1941755..1941903 4356..4504 745 100 Plus
2L 23513712 2L 1937441..1937586 4005..4150 730 100 Plus
2L 23513712 2L 1938508..1938620 4148..4260 565 100 Plus
2L 23513712 2L 1941579..1941677 4257..4355 495 100 Plus
2L 23513712 2L 1932055..1932147 742..834 465 100 Plus
2L 23513712 2L 1910067..1910149 660..742 415 100 Plus
2L 23513712 2L 1942107..1942182 4580..4655 380 100 Plus
2L 23513712 2L 1941971..1942046 4505..4580 380 100 Plus
Blast to na_te.dros performed 2019-03-15 15:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 6359..6473 5875..5988 138 64.4 Plus
412 7567 412 412 7567bp 3763..3807 5958..5914 126 75.6 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 421..546 5924..6041 124 60.3 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 420..545 5924..6041 124 60.3 Plus

LD01189.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:52:21 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 1941770..1941845 4505..4580 98 -> Plus
chr2L 1941907..1941981 4581..4655 100 -> Plus
chr2L 1884901..1885117 118..335 99 -> Plus
chr2L 1909495..1909818 336..659 99 -> Plus
chr2L 1909893..1909975 660..742 100 -> Plus
chr2L 1931869..1931960 743..834 100 -> Plus
chr2L 1933602..1933845 835..1078 98 -> Plus
chr2L 1933915..1934124 1079..1288 98 -> Plus
chr2L 1942050..1942250 4656..4856 100 -> Plus
chr2L 1942309..1942462 4857..5010 100 -> Plus
chr2L 1934275..1934694 1289..1708 99 -> Plus
chr2L 1934757..1935479 1709..2431 98 -> Plus
chr2L 1935535..1936787 2432..3684 99 -> Plus
chr2L 1936850..1937169 3685..4004 99 -> Plus
chr2L 1937237..1937379 4005..4147 100 -> Plus
chr2L 1938307..1938418 4148..4259 97 -> Plus
chr2L 1941381..1941476 4260..4355 100 -> Plus
chr2L 1941554..1941702 4356..4504 100 -> Plus
chr2L 1942584..1943618 5011..6044 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:47:11 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RE 1..4527 665..5191 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:48:00 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RE 1..4527 665..5191 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:43:46 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 1..4527 665..5191 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:41:48 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RE 1..4527 665..5191 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:18:48 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 1..4527 665..5191 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:47:09 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 1..6044 1..6044 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:47:59 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 1..6044 1..6044 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:46 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 363..6406 1..6044 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:41:48 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 1..6044 1..6044 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:18:48 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
CG7337-RA 363..6406 1..6044 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:21 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1909669..1909992 336..659 100 -> Plus
2L 1910067..1910149 660..742 100 -> Plus
2L 1932056..1932147 743..834 100 -> Plus
2L 1933806..1934049 835..1078 100 -> Plus
2L 1934119..1934328 1079..1288 100 -> Plus
2L 1884984..1885318 1..335 100 -> Plus
2L 1941971..1942046 4505..4580 100 -> Plus
2L 1942108..1942182 4581..4655 100 -> Plus
2L 1934479..1934898 1289..1708 100 -> Plus
2L 1934961..1935683 1709..2431 100 -> Plus
2L 1935739..1936991 2432..3684 100 -> Plus
2L 1937054..1937373 3685..4004 100 -> Plus
2L 1937441..1937583 4005..4147 100 -> Plus
2L 1938508..1938619 4148..4259 100 -> Plus
2L 1941582..1941677 4260..4355 100 -> Plus
2L 1941755..1941903 4356..4504 100 -> Plus
2L 1942251..1942451 4656..4856 100 -> Plus
2L 1942510..1942663 4857..5010 100 -> Plus
2L 1942785..1943818 5011..6044 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:21 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1909669..1909992 336..659 100 -> Plus
2L 1910067..1910149 660..742 100 -> Plus
2L 1932056..1932147 743..834 100 -> Plus
2L 1933806..1934049 835..1078 100 -> Plus
2L 1934119..1934328 1079..1288 100 -> Plus
2L 1884984..1885318 1..335 100 -> Plus
2L 1941971..1942046 4505..4580 100 -> Plus
2L 1942108..1942182 4581..4655 100 -> Plus
2L 1934479..1934898 1289..1708 100 -> Plus
2L 1934961..1935683 1709..2431 100 -> Plus
2L 1935739..1936991 2432..3684 100 -> Plus
2L 1937054..1937373 3685..4004 100 -> Plus
2L 1937441..1937583 4005..4147 100 -> Plus
2L 1938508..1938619 4148..4259 100 -> Plus
2L 1941582..1941677 4260..4355 100 -> Plus
2L 1941755..1941903 4356..4504 100 -> Plus
2L 1942251..1942451 4656..4856 100 -> Plus
2L 1942510..1942663 4857..5010 100 -> Plus
2L 1942785..1943818 5011..6044 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:52:21 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1909669..1909992 336..659 100 -> Plus
2L 1910067..1910149 660..742 100 -> Plus
2L 1932056..1932147 743..834 100 -> Plus
2L 1933806..1934049 835..1078 100 -> Plus
2L 1934119..1934328 1079..1288 100 -> Plus
2L 1884984..1885318 1..335 100 -> Plus
2L 1941971..1942046 4505..4580 100 -> Plus
2L 1942108..1942182 4581..4655 100 -> Plus
2L 1934479..1934898 1289..1708 100 -> Plus
2L 1934961..1935683 1709..2431 100 -> Plus
2L 1935739..1936991 2432..3684 100 -> Plus
2L 1937054..1937373 3685..4004 100 -> Plus
2L 1937441..1937583 4005..4147 100 -> Plus
2L 1938508..1938619 4148..4259 100 -> Plus
2L 1941582..1941677 4260..4355 100 -> Plus
2L 1941755..1941903 4356..4504 100 -> Plus
2L 1942251..1942451 4656..4856 100 -> Plus
2L 1942510..1942663 4857..5010 100 -> Plus
2L 1942785..1943818 5011..6044 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:46 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 1942510..1942663 4857..5010 100 -> Plus
arm_2L 1884984..1885318 1..335 100 -> Plus
arm_2L 1909669..1909992 336..659 100 -> Plus
arm_2L 1910067..1910149 660..742 100 -> Plus
arm_2L 1932056..1932147 743..834 100 -> Plus
arm_2L 1933806..1934049 835..1078 100 -> Plus
arm_2L 1934119..1934328 1079..1288 100 -> Plus
arm_2L 1934479..1934898 1289..1708 100 -> Plus
arm_2L 1934961..1935683 1709..2431 100 -> Plus
arm_2L 1935739..1936991 2432..3684 100 -> Plus
arm_2L 1937054..1937373 3685..4004 100 -> Plus
arm_2L 1937441..1937583 4005..4147 100 -> Plus
arm_2L 1938508..1938619 4148..4259 100 -> Plus
arm_2L 1941582..1941677 4260..4355 100 -> Plus
arm_2L 1941755..1941903 4356..4504 100 -> Plus
arm_2L 1941971..1942046 4505..4580 100 -> Plus
arm_2L 1942108..1942182 4581..4655 100 -> Plus
arm_2L 1942251..1942451 4656..4856 100 -> Plus
arm_2L 1942785..1943818 5011..6044 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:33:27 Download gff for LD01189.complete
Subject Subject Range Query Range Percent Splice Strand
2L 1942510..1942663 4857..5010 100 -> Plus
2L 1942785..1943818 5011..6044 100   Plus
2L 1884984..1885318 1..335 100 -> Plus
2L 1909669..1909992 336..659 100 -> Plus
2L 1910067..1910149 660..742 100 -> Plus
2L 1932056..1932147 743..834 100 -> Plus
2L 1933806..1934049 835..1078 100 -> Plus
2L 1934119..1934328 1079..1288 100 -> Plus
2L 1934479..1934898 1289..1708 100 -> Plus
2L 1934961..1935683 1709..2431 100 -> Plus
2L 1935739..1936991 2432..3684 100 -> Plus
2L 1937054..1937373 3685..4004 100 -> Plus
2L 1937441..1937583 4005..4147 100 -> Plus
2L 1938508..1938619 4148..4259 100 -> Plus
2L 1941582..1941677 4260..4355 100 -> Plus
2L 1941755..1941903 4356..4504 100 -> Plus
2L 1941971..1942046 4505..4580 100 -> Plus
2L 1942108..1942182 4581..4655 100 -> Plus
2L 1942251..1942451 4656..4856 100 -> Plus

LD01189.pep Sequence

Translation from 664 to 5190

> LD01189.pep
MDAPDVGRIIRAPARRKRNDEQLMDRIKLKKVLGLTVCSNAALDVSPVSG
LLAYPAGCTVVLFNAKRQTQAYLVNTSRKAFTSVAFSRCGRYVATGECGI
NPAIKVWELETPNGSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVSV
GSQHDMIVNVFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRHVKY
WYLEGGRKYKDPIPLMGRSAILGDLRDNDFCAVACGKGICAESTYAITRQ
GHLVEFSSRRLLDKWVQCRTTNANCICVNERFILVGCAESIIRIFNSATL
EYVTTLPRTHYLGVDVAQGIQINHIMSVPQQAKFPDCIAMVFDEQRSKVS
CVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQTL
PEECFVTCSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFI
KDQGSSLFDKAGNSSYDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVN
LRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDVAQNYLLL
QTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNTS
GKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSL
IKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTND
CRHLISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSGHAPLPRPLAPIS
PPDGIVLESPTSEIEQPQLQPKFGVAERFSDVGQLPQWAMRKAAADSDSG
ALSIPTPSGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRARGRWAQRST
QLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDYNSASSKDITYNQTYL
SEDSSIDSGMETRRGELKFIGSSNNGTVVTVSSVSSIAVSASNGAMSTGS
GAAQQRLQLPDKRLKPGLRFDTHTHDHDGDVEDISDGERTSSDHGMFYNN
LAPSTPTDFKVTAMNEDELRKSVRRQKFEKSGLQLTPSALSGNGSSHTAS
TGTGTSDTEDEGSTPSAENAERSLASTLGGSSENLPQSSTNSFLHAALPE
GPGLTTPMERGGSSRRSISAKHNTENGKSVAAPPTITKSYTSTKKEELLQ
VINKVKQQLENVGHRPLRGSHSISDLSLAANLDGSRNAGGGPGRYQKPGN
PKTLNPMPIEESSIRRACSLSDLHMGNFGKPGKSQNGTPQKPQVQHRNGN
VSRSASKRNSLQGKTGLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQGR
SNGPIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNN
KPIVPPRPRNLAFDHKSKLMINNSGSPGGNAKQRSGVTSTEDFEGTDPEA
QVHNVINKLYTTTQAAMQLHANLKNTLLLKELENALIMSRNMLSSITNRQ
ADKTNNGGGGLGVGGSGGLNHDQLNADNGDYLMMVNNCADLLSNLRTKHK
PDDCENNS*

LD01189.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14013-PA 1510 GF14013-PA 1..1510 1..1508 7770 95.8 Plus
Dana\GF18514-PA 510 GF18514-PA 186..453 458..735 199 24.4 Plus
Dana\GF17851-PA 332 GF17851-PA 19..324 381..674 169 25.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24815-PA 2351 GG24815-PA 1..1198 1..1198 6462 98.9 Plus
Dere\GG24815-PA 2351 GG24815-PA 2037..2351 1197..1508 1616 96.8 Plus
Dere\GG14860-PA 510 GG14860-PA 186..453 458..735 200 24.4 Plus
Dere\GG20577-PA 411 GG20577-PA 108..368 469..718 161 23.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25206-PA 1500 GH25206-PA 1..1500 1..1508 6730 85.1 Plus
Dgri\GH10866-PA 2453 GH10866-PA 23..1202 27..1197 5485 87.1 Plus
Dgri\GH10866-PA 2453 GH10866-PA 2146..2453 1199..1508 1102 73.5 Plus
Dgri\GH15796-PA 510 GH15796-PA 168..453 427..735 202 23.7 Plus
Dgri\GH22777-PA 411 GH22777-PA 108..368 469..718 160 23 Plus
Dgri\GH22558-PA 336 GH22558-PA 46..328 389..674 157 23.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
Wdr62-PE 1508 CG7337-PE 1..1508 1..1508 7846 100 Plus
Wdr62-PA 1508 CG7337-PA 1..1508 1..1508 7846 100 Plus
Wdr62-PD 1539 CG7337-PD 56..1539 25..1508 7717 99.9 Plus
Wdr62-PB 1504 CG7337-PB 23..1504 27..1508 7713 100 Plus
Wdr62-PF 1554 CG7337-PF 56..1554 25..1508 7691 98.9 Plus
Wdr62-PH 1476 CG7337-PH 1..1476 1..1508 7625 97.8 Plus
Wdr62-PC 2347 CG7337-PC 23..1343 27..1327 6098 90.6 Plus
Wdr62-PG 2397 CG7337-PG 56..1393 25..1327 6076 89.4 Plus
Wdr62-PC 2347 CG7337-PC 2036..2347 1197..1508 1627 99.7 Plus
Wdr62-PG 2397 CG7337-PG 2086..2397 1197..1508 1627 99.7 Plus
slmb-PC 510 CG3412-PC 204..453 463..735 209 24 Plus
slmb-PA 510 CG3412-PA 204..453 463..735 209 24 Plus
slmb-PB 597 CG3412-PB 204..453 463..735 209 24 Plus
Muc68D-PB 1514 CG6004-PB 643..1223 791..1390 193 20 Plus
Muc68D-PB 1514 CG6004-PB 678..1255 794..1383 176 20.5 Plus
Muc68D-PB 1514 CG6004-PB 735..1357 750..1369 176 19.8 Plus
Lis-1-PG 411 CG8440-PG 108..368 469..718 173 22.8 Plus
Lis-1-PF 411 CG8440-PF 108..368 469..718 173 22.8 Plus
Lis-1-PB 411 CG8440-PB 108..368 469..718 173 22.8 Plus
Lis-1-PA 411 CG8440-PA 108..368 469..718 173 22.8 Plus
Mur89F-PC 2158 CG4090-PC 526..1018 851..1355 169 20.4 Plus
Mur89F-PB 2159 CG4090-PB 526..1018 851..1355 169 20.4 Plus
CG3909-PA 331 CG3909-PA 19..323 381..674 166 22.8 Plus
Muc68D-PB 1514 CG6004-PB 409..994 819..1426 165 18.6 Plus
Taf5-PA 704 CG7704-PA 342..616 434..729 165 23.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17279-PA 1505 GI17279-PA 1..1505 1..1508 6796 85.1 Plus
Dmoj\GI23727-PA 510 GI23727-PA 186..453 458..735 200 24.4 Plus
Dmoj\GI23133-PA 339 GI23133-PA 46..331 386..674 157 24.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19665-PA 1511 GL19665-PA 1..1511 1..1508 7180 91.8 Plus
Dper\GL22031-PA 507 GL22031-PA 201..450 463..735 200 24 Plus
Dper\GL20028-PA 684 GL20028-PA 347..596 455..729 159 23.9 Plus
Dper\GL13093-PA 356 GL13093-PA 53..220 543..716 156 24.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20273-PA 1330 GA20273-PA 1..1299 1..1295 6278 91.3 Plus
Dpse\GA27349-PA 507 GA27349-PA 201..450 463..735 200 24 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:50:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16837-PA 1508 GM16837-PA 1..1508 1..1508 8104 99.5 Plus
Dsec\GM15099-PA 510 GM15099-PA 186..453 458..735 200 24.4 Plus
Dsec\GM21668-PA 411 GM21668-PA 108..368 469..718 162 23.4 Plus
Dsec\GM19230-PA 361 GM19230-PA 58..225 543..716 157 25.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:50:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23119-PA 1508 GD23119-PA 1..1508 1..1508 8112 99.6 Plus
Dsim\GD20006-PA 510 GD20006-PA 186..453 458..735 200 24.4 Plus
Dsim\GD11168-PA 411 GD11168-PA 108..368 469..718 162 23.4 Plus
Dsim\GD16610-PA 361 GD16610-PA 58..225 543..716 157 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22853-PA 1501 GJ22853-PA 1..1501 1..1508 6912 86.4 Plus
Dvir\GJ23285-PA 510 GJ23285-PA 168..453 427..735 202 23.7 Plus
Dvir\GJ21422-PA 411 GJ21422-PA 163..368 527..718 161 26.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:51:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14569-PA 3590 GK14569-PA 1..1435 1..1446 6747 89.3 Plus
Dwil\GK13501-PA 512 GK13501-PA 188..455 458..735 200 24.4 Plus
Dwil\GK24428-PA 493 GK24428-PA 165..411 469..721 168 25.5 Plus
Dwil\GK19416-PA 346 GK19416-PA 44..218 547..724 162 25.3 Plus
Dwil\GK22499-PA 334 GK22499-PA 41..326 386..674 156 24.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17780-PA 1511 GE17780-PA 1..1511 1..1508 8031 98.5 Plus
Dyak\GE25013-PA 487 GE25013-PA 163..430 458..735 199 24.4 Plus
Dyak\GE11762-PA 411 GE11762-PA 108..368 469..718 161 23.4 Plus
Dyak\GE26002-PA 332 GE26002-PA 19..324 381..674 160 23.1 Plus

LD01189.hyp Sequence

Translation from 664 to 5190

> LD01189.hyp
MDAPDVGRIIRAPARRKRNDEQLMDRIKLKKVLGLTVCSNAALDVSPVSG
LLAYPAGCTVVLFNAKRQTQAYLVNTSRKAFTSVAFSRCGRYVATGECGI
NPAIKVWELETPNGSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVSV
GSQHDMIVNVFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRHVKY
WYLEGGRKYKDPIPLMGRSAILGDLRDNDFCAVACGKGICAESTYAITRQ
GHLVEFSSRRLLDKWVQCRTTNANCICVNERFILVGCAESIIRIFNSATL
EYVTTLPRTHYLGVDVAQGIQINHIMSVPQQAKFPDCIAMVFDEQRSKVS
CVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQTL
PEECFVTCSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFI
KDQGSSLFDKAGNSSYDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVN
LRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDVAQNYLLL
QTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNTS
GKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSL
IKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTND
CRHLISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSGHAPLPRPLAPIS
PPDGIVLESPTSEIEQPQLQPKFGVAERFSDVGQLPQWAMRKAAADSDSG
ALSIPTPSGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRARGRWAQRST
QLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDYNSASSKDITYNQTYL
SEDSSIDSGMETRRGELKFIGSSNNGTVVTVSSVSSIAVSASNGAMSTGS
GAAQQRLQLPDKRLKPGLRFDTHTHDHDGDVEDISDGERTSSDHGMFYNN
LAPSTPTDFKVTAMNEDELRKSVRRQKFEKSGLQLTPSALSGNGSSHTAS
TGTGTSDTEDEGSTPSAENAERSLASTLGGSSENLPQSSTNSFLHAALPE
GPGLTTPMERGGSSRRSISAKHNTENGKSVAAPPTITKSYTSTKKEELLQ
VINKVKQQLENVGHRPLRGSHSISDLSLAANLDGSRNAGGGPGRYQKPGN
PKTLNPMPIEESSIRRACSLSDLHMGNFGKPGKSQNGTPQKPQVQHRNGN
VSRSASKRNSLQGKTGLGASSNSMNVLNQGSDSEPEDSNRLRSASNGQGR
SNGPIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSEETPNSTVNN
KPIVPPRPRNLAFDHKSKLMINNSGSPGGNAKQRSGVTSTEDFEGTDPEA
QVHNVINKLYTTTQAAMQLHANLKNTLLLKELENALIMSRNMLSSITNRQ
ADKTNNGGGGLGVGGSGGLNHDQLNADNGDYLMMVNNCADLLSNLRTKHK
PDDCENNS*

LD01189.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7337-PE 1508 CG7337-PE 1..1508 1..1508 7846 100 Plus
CG7337-PA 1508 CG7337-PA 1..1508 1..1508 7846 100 Plus
CG7337-PD 1539 CG7337-PD 56..1539 25..1508 7717 99.9 Plus
CG7337-PB 1504 CG7337-PB 23..1504 27..1508 7713 100 Plus
CG7337-PF 1554 CG7337-PF 56..1554 25..1508 7691 98.9 Plus