BDGP Sequence Production Resources |
Search the DGRC for LD01461
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 14 |
Well: | 61 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7945-RA |
Protein status: | LD01461.pep: gold |
Preliminary Size: | 1603 |
Sequenced Size: | 1440 |
Gene | Date | Evidence |
---|---|---|
CG7945 | 2001-10-10 | Blastp of sequenced clone |
CG7945 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7945 | 2008-04-29 | Release 5.5 accounting |
CG7945 | 2008-08-15 | Release 5.9 accounting |
CG7945 | 2008-12-18 | 5.12 accounting |
1440 bp (1440 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061044
> LD01461.complete TACAAATCCCACAATATAATGTTAAATTAATCATATTTATACTTATCTTC ATTTAAGTAAAGCGAAATATTCGATTGACCCTCGAAGTAAACAACCCAGG TGCTCAAAAATGAAGCTAACAAAGTTAGATTAATCGGTGTCTACGAATTA TCTGGAAACACAAGCATTTCCCGTCATCTAACTCAAACTGCCCAACTCGA AAAATCAACAATATTTTTGCATCGGGCCAAAGGTGCATTAAAACCGGAGC CTCAAGTCTCGGGCGGCAGCTTCAAAGCAAAAACAGATAAAATTAAGCTT AAGCAACAGCATCAAACACTTCGACACCCACTCGAAAAAAAAAAGCTTAA GACATTCCAAAAAAAGTAGCCAGCAAAGCGGCTAAAAAAAAATAAATAAG ATAAAACCAAAACCCAAAACGAAACAGTAGGCAGCTATCCAACCATCTTG GGTGACAAACACTTGACCGGCTTTTTGGAGGGCGACAGGTTTAAATCAAA TCTGGAGCAGCCGCAGGATATGGAAGTTGATGCGCCAACAACGCAGGAAA CCAGTGACACTCATCATCATCACCATAGTACTTATCACCAGCAGCTGCAT CAGATCTCGCCCAGCGATTACCACTCGGAGGCATCCATGAATTTTGATCA TTTGCAAGACCTGAGGGCCGATGCCATGGCCTCCTCATCCCCATCCGGAT CCGGAGGTGGTGGCAATGGCGGGAACAGCTCCTACGGACTCGTCGACGAT AGTAGAGCTCTGGACAGACCATTTAACGCCAGCGAGAGATTTGTCACCAT ACTGGATAGTTTGGATGCACGTGTGGAGAAGCTGCGCAAGGATGCACTCA ACCTGCAGGAGAAGAAAGACTACCTTCTGATGTCCATGGATCTGATCAAG AGCAACGAAATGATGCAGAACATGAGCGAAGCTGAACGAGAGGAGATCAT TTTGTACCTACAACGGGTGAGCTCTCGCTTGGCCACCGTGGAGCTGCGTG TGCGCACTGTTCGGGACAACTCTCAGGAGGATTCCCTTAGCCAGATAAAT GTATTGATTGACAGCATGATCAAGATGGGTGATCCCGTGATCGGACGCCA ACGATGCCAGTTTTACTTAAACGCCTGCTGCAGCAGCTCAATGGATCCAT CCGGACACATGGACACCGTGCCCGAGGCCGATGTTGGGCCGGTCGACAAG AAGTTCGAGAGCGTTTTGCTTGGCTGCACTCTGGACGATCAGAAGAACAT CAAGAAGCGGCTCCAGGCCTTAATGGCTTATCTGAATAAGCAAACTGTTA GCCATTAATTAAATTGTTTTTTGGTCTATTAACTATTCATAGCATTATTA TCAAACCAAACGAAATACATCACCAAGCTAGATGAAACGAATAATAAAGA AAGCAGCATATACACCAGAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7945-RA | 1478 | CG7945-RA | 38..1454 | 1..1418 | 7050 | 99.9 | Plus |
CG7945.a | 1460 | CG7945.a | 16..1371 | 62..1418 | 6745 | 99.9 | Plus |
CG7945-RC | 3575 | CG7945-RC | 1609..2240 | 787..1418 | 3160 | 100 | Plus |
CG7945-RC | 3575 | CG7945-RC | 645..1145 | 266..767 | 2470 | 99.8 | Plus |
CG7945-RC | 3575 | CG7945-RC | 12..280 | 1..269 | 1345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15512906..15513406 | 767..266 | 2460 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 15511647..15512135 | 1418..930 | 2445 | 100 | Minus |
chr3L | 24539361 | chr3L | 15513771..15514039 | 269..1 | 1345 | 100 | Minus |
chr3L | 24539361 | chr3L | 15512298..15512442 | 931..787 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15522968..15523468 | 767..266 | 2460 | 99.8 | Minus |
3L | 28110227 | 3L | 15521709..15522197 | 1418..930 | 2445 | 100 | Minus |
3L | 28110227 | 3L | 15523833..15524101 | 269..1 | 1345 | 100 | Minus |
3L | 28110227 | 3L | 15522360..15522504 | 931..787 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15516068..15516568 | 767..266 | 2470 | 99.8 | Minus |
3L | 28103327 | 3L | 15514809..15515297 | 1418..930 | 2445 | 100 | Minus |
3L | 28103327 | 3L | 15516933..15517201 | 269..1 | 1345 | 100 | Minus |
3L | 28103327 | 3L | 15515460..15515604 | 931..787 | 725 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15512298..15512440 | 789..931 | 100 | <- | Minus |
chr3L | 15512498..15512518 | 768..788 | 100 | <- | Minus |
chr3L | 15511647..15512133 | 932..1418 | 100 | <- | Minus |
chr3L | 15512906..15513402 | 270..767 | 99 | <- | Minus |
chr3L | 15513771..15514039 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..789 | 520..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..789 | 520..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..789 | 520..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..789 | 520..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..789 | 520..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..1408 | 10..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..1406 | 10..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 37..1451 | 1..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 1..1408 | 10..1418 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7945-RA | 37..1451 | 1..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15521709..15522195 | 932..1418 | 100 | <- | Minus |
3L | 15522360..15522502 | 789..931 | 100 | <- | Minus |
3L | 15522560..15522580 | 768..788 | 100 | <- | Minus |
3L | 15522968..15523464 | 270..767 | 99 | <- | Minus |
3L | 15523833..15524101 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15521709..15522195 | 932..1418 | 100 | <- | Minus |
3L | 15522360..15522502 | 789..931 | 100 | <- | Minus |
3L | 15522560..15522580 | 768..788 | 100 | <- | Minus |
3L | 15522968..15523464 | 270..767 | 99 | <- | Minus |
3L | 15523833..15524101 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15521709..15522195 | 932..1418 | 100 | <- | Minus |
3L | 15522360..15522502 | 789..931 | 100 | <- | Minus |
3L | 15522560..15522580 | 768..788 | 100 | <- | Minus |
3L | 15522968..15523464 | 270..767 | 99 | <- | Minus |
3L | 15523833..15524101 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15514809..15515295 | 932..1418 | 100 | <- | Minus |
arm_3L | 15515460..15515602 | 789..931 | 100 | <- | Minus |
arm_3L | 15515660..15515680 | 768..788 | 100 | <- | Minus |
arm_3L | 15516068..15516564 | 270..767 | 99 | <- | Minus |
arm_3L | 15516933..15517201 | 1..269 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15516933..15517201 | 1..269 | 100 | Minus | |
3L | 15514809..15515295 | 932..1418 | 100 | <- | Minus |
3L | 15515460..15515602 | 789..931 | 100 | <- | Minus |
3L | 15515660..15515680 | 768..788 | 100 | <- | Minus |
3L | 15516068..15516564 | 270..767 | 99 | <- | Minus |
Translation from 519 to 1307
> LD01461.hyp MEVDAPTTQETSDTHHHHHSTYHQQLHQISPSDYHSEASMNFDHLQDLRA DAMASSSPSGSGGGGNGGNSSYGLVDDSRALDRPFNASERFVTILDSLDA RVEKLRKDALNLQEKKDYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRV SSRLATVELRVRTVRDNSQEDSLSQINVLIDSMIKMGDPVIGRQRCQFYL NACCSSSMDPSGHMDTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQA LMAYLNKQTVSH*
Translation from 519 to 1307
> LD01461.pep MEVDAPTTQETSDTHHHHHSTYHQQLHQISPSDYHSEASMNFDHLQDLRA DAMASSSPSGSGGGGNGGNSSYGLVDDSRALDRPFNASERFVTILDSLDA RVEKLRKDALNLQEKKDYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRV SSRLATVELRVRTVRDNSQEDSLSQINVLIDSMIKMGDPVIGRQRCQFYL NACCSSSMDPSGHMDTVPEADVGPVDKKFESVLLGCTLDDQKNIKKRLQA LMAYLNKQTVSH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10728-PA | 353 | GF10728-PA | 87..353 | 1..262 | 1024 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13543-PA | 344 | GG13543-PA | 77..344 | 1..262 | 1171 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16818-PA | 367 | GH16818-PA | 143..367 | 34..262 | 921 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7945-PA | 262 | CG7945-PA | 1..262 | 1..262 | 1346 | 100 | Plus |
CG7945-PB | 248 | CG7945-PB | 68..248 | 82..262 | 910 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12223-PA | 259 | GI12223-PA | 1..258 | 1..261 | 993 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25595-PA | 331 | GL25595-PA | 78..331 | 1..262 | 979 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20709-PA | 331 | GA20709-PA | 78..331 | 1..262 | 979 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24486-PA | 361 | GM24486-PA | 96..361 | 1..262 | 1162 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12558-PA | 246 | GD12558-PA | 66..246 | 82..262 | 917 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11453-PA | 332 | GJ11453-PA | 81..332 | 1..262 | 946 | 72.9 | Plus |