LD01463.complete Sequence
2313 bp (2313 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061045
> LD01463.complete
CGTGCACAGCTGAAAAGTAAAATAATGCAAACGGCTGTATTTTTTATATA
CTCGGGGTCCACTGGTACATACAAATTGAAAAGGTTGCTGCTGTTTATAT
AACTTCGAATATTATCACGTTGCGTTAGACCGAAATTGAAAGAAATCGGA
TTACTCAGTGGCCAGGGCATGCAAATCGCTCAAATTGTGTATGCATTAAG
TTTTACTCCTCGCTTTGATTTTGTTATATTGTTGTACATACTAAAACTTA
TTTGTTCTTCACCTTCTTCGGTAAGCCATTGTGTGTGTGAGTGTGTACGT
CGTCATGCGCTTGTCCTCGTTCTCTCTCTTTCGCGCACATGCAGCGCCGT
GTGCTCCCTTTTGTGTTTCTTTTCGTTTCGTCCTATTCCTCAATCGACTT
TTCATTTTTAGATCTTAATATCGCTCTTAGTCTATGAAATCAAGTGAAAT
AAAATGCAAAATATTCAGTTAAGCGAACAATTTTCACTTCCAATTTCTGC
AGTGAAAAATGCATCAAAGTGTGTGTATAACTGCATATAAAAGCCGTGCA
CATGTGCCTAAACGTGTGTATATGCTCCTTTGTGCATATAAGGCGTTGTA
AAAGGCTGAAAATATGTGGTATAATTTACTTGGCTTTCCGTTGAAGTTAT
CCCCCCTCTGGCAACAATGCTTTATGCTGACCTTGCTTCTAAAAACTCAA
GTATTTCCCATGTGGCTAAAAAACCTTCGGAGTTAAATTGTTGCATGTCT
AGTTCCACCAACACCCACTAGATAGGGTTGCCAGGTGGCATTCCTATTGC
GTTCTTATGTCCGTTTATTCAACTACGTAATTGTTACTTTATTGGATTCG
AAGTTTTACTGAGTAATAAACTGCGCCAAATTAAACAGATCATATTCTTT
ATTTAAAAATATTTACAATTTAAAAAAAAAATTTATATATTTTCTGAAAA
TCTAAAACGTCAATTAACATTAGTAGAGGAATGATAAGAATTATAAAATG
GGCTATAAGTTCGGAAACATATCAAACACATGAAAAGTTACTTTTATATT
CGATTTTTTACCACTGTCTAAAGTTGGGCCATCTCCCTCACACACTCAGC
TGTGCGTAGGCAGGTTTCGTAACACGTTGAAAAGAGACAAAAAAAATGTC
GACATGGCGCTGGAACGGAAAATGGGGAATACAGAAAACTCGCTAGGGCA
GCACTATTGGGACCAGCTTCGATATGCGCTTGACTGCTTCTTTCCAACGA
TATTTAAATAAGTTACAAACAATACCAACAGCACAGCACGCACAATGCAT
AACGAACAGGGGAAATTAAGAAGGTTTTCAAAGGGGGAGGTAGGGCACAG
CCACATGAGCACACGAGTTGTTATCAATTATGCTCGGGCCAGGGTTGTCA
TACTGTCGTGTAGTTGACAAACATTTGTACATAAGCGTCTGACAGAGTTG
CCCTCAGCGGCAATAGACTTTTAGCGCAGACTTAACTTATATTTTTAAAC
TAATATATTTGAGCTCCATTTTATTAAGTATAAAACTTCGTTACAAATAT
AGTTTTTTAAGTATTTATCTAATTGAATTTGGAGCAAGCTGTTTAGATTC
AACAATGGCACCTATTTGTTTCAAACAAACTGTGTACTTGTGTTGCGGAT
ATAGTTATCGATTTGGATAGTTCTGGACAAATATGTTGCATATCTATTGA
AAATGAATTTACATTTGTATACTCGTAAAAAATGGGGATGCGAAATGTAA
TTTAACTGCACTAAAGTTGATGAGTCTGCCCTGTTTAAGACCCTTAACGT
TTCACGTTTTTTACTTCTAATAAAAGGCAACAACAACCGATGCCAGCAAC
CACAAAGCAATCGCCATATGTTCGAGCTGCCACACGCAAAGCAAAACGCT
TGGCACACACACATGTACAGTATACTCACACATCCACACGCGTGCATGAA
GGCGCTTCCATTTGTGGCCTCGCTTATTATTTTTCTCGTCAGCGCTTTTC
GGTGTGAAAAACTTGTGGGGCAGAGATACGAGTAGAGACTAATAAATGTA
GATAGATTGTATTTTCTGGGTTGGGTGTTTGGAACGAGTGCACTAACTAT
CGTGGTGAGGCACTTGCCGATTTCGGCAAATGTGCTCTAAATCATAGGTT
CTACATTCATACACGTATTCAAGACGAGCATACCTAAACGATTTCATTCT
GCGGTTTTGCTTATTCTGCCCACGGATATTAAAATGCGATCTCAGAAATT
ATCTTTAAAGATTTTAAGATATTAAAAATTAATGTACAGAAAAAAAAAAA
AAAAAAAAAAAAA
LD01463.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 20:09:42 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:15:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 629852..632140 | 2289..1 | 11445 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:48:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4804151..4806444 | 2294..1 | 11470 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:33:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 4544982..4547275 | 2294..1 | 11470 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 23:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 725..872 | 1056..904 | 139 | 61.8 | Minus |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 1875..1997 | 1025..904 | 134 | 60.8 | Minus |
G7 | 1192 | G7 G7 1192bp | 1116..1172 | 937..881 | 114 | 66.7 | Minus |
LD01463.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:16:09 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 629852..632140 | 1..2289 | 100 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 17:41:23 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 20:16:20 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 16:47:35 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:09 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4804156..4806444 | 1..2289 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:09 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4804156..4806444 | 1..2289 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:09 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4804156..4806444 | 1..2289 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:23 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 629878..632166 | 1..2289 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:23 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 629878..632166 | 1..2289 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:53:13 Download gff for
LD01463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4544987..4547275 | 1..2289 | 100 | | Minus |
LD01463.pep Sequence
Translation from 168 to 410
> LD01463.pep
MQIAQIVYALSFTPRFDFVILLYILKLICSSPSSVSHCVCECVRRHALVL
VLSLSRTCSAVCSLLCFFSFRPIPQSTFHF*
LD01463.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:03:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG16495-PA | 101 | GG16495-PA | 1..78 | 1..70 | 156 | 55.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:03:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19524-PA | 88 | GM19524-PA | 1..69 | 1..65 | 188 | 84.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:03:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD17773-PA | 88 | GD17773-PA | 1..69 | 1..65 | 233 | 85.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:03:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18065-PA | 128 | GE18065-PA | 1..83 | 1..80 | 240 | 69.9 | Plus |
LD01463.hyp Sequence
Translation from 168 to 410
> LD01463.hyp
MQIAQIVYALSFTPRFDFVILLYILKLICSSPSSVSHCVCECVRRHALVL
VLSLSRTCSAVCSLLCFFSFRPIPQSTFHF*
Sequence LD01463.hyp has no blast hits.