BDGP Sequence Production Resources |
Search the DGRC for LD01582
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 15 |
Well: | 82 |
Vector: | pBS SK- |
Associated Gene/Transcript | mbm-RA |
Protein status: | LD01582.pep: gold |
Preliminary Size: | 2151 |
Sequenced Size: | 2155 |
Gene | Date | Evidence |
---|---|---|
CG11604 | 2001-01-01 | Release 2 assignment |
CG11604 | 2001-11-09 | Blastp of sequenced clone |
CG11604 | 2003-01-01 | Sim4 clustering to Release 3 |
mbm | 2008-04-29 | Release 5.5 accounting |
mbm | 2008-08-15 | Release 5.9 accounting |
mbm | 2008-12-18 | 5.12 accounting |
2155 bp (2155 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069307
> LD01582.complete GACATACTTCTTTGGCTTGAACTTGGTTTTGCCCCAGTCCTTGGTGCGGC TCTGCAATTGACGTTCATGGCGATCATTATCTTCTGTTTTCTTCGGATTG GTAGAATTCATAGCGTTGTTATTTGTGGTTAAACTGAATATCGTCCATCT GACCATCTGAGGTGCCAGTTTGAGAAACTATCGAATCTAGCTATATATGT TAAATCTTATAAAAACCTTCCATTGGTCACTTCACATTTTAGTCCATTAC ATGTATTATGTCACATATTGTCACAGTATTATATATATATATTATATTAT ATATAAGGTATTCAAACTTAATATACATATAATGAATAGCAGTTTTGGCT TGAAAGAAGCCACTTCGGCAGTCCCACCAACAATCGGATCTTATCGATAA CCCCAATCGGCTCAACACGTGCGCCGCAACTAGGCGGTTTTATAAATATT AACAATTCCATAATGCACAACAGTGGAGGACAATCCGGCTGGAACCTTTC AGGAGAGGAAAGAAAACCGTTTTCGAATTACGGCCGCAACAATCAGCAGA GGCGCAGCAGTGGAGGCGGGGGAAGAGGCAGCCACAGCCAAAATCGCGCC GCCAATGGAAACTGGCCAGACGCTGGATCGGAAGGTGGGCAGAATGGAAA CGCGTTTAACAAGTTCAGAGATCCCCAACAGGAGCTGGATAATCATCAGC CAAACAAGAGAGGGGGCCGAAGAAATAGAGGCGGTGGCGGAGGAGGTGGT GGTTGGGGTGGCAGGCGAGGGAACCGCGGCAGAGATTCCAATAGGCGTGG TGGCCGTAACAACTCGTGGCAACCTAAGGATCAGCATGTTAGTCCTGGCC AAAGTAACATGCTGTACTTCGATAATGTGGGGGACTTTACCGAAGACCCA CCTCTGCCTCGATCCTCGCCTGCTCCCTCCTCTCTCAGACAGGAGAGCCT GCCACCTGTTACTTTCGCTGCGGACTTGACGCCACCACCACCTGTATCTG TTGCACCACCTGATGTGGCTGTTACGCCAGAAGAACCTACTGTGCCGCTA ATCAATATCAAGAAGGAGAAAGAAATGGAGCACAAGTCAAAAATAAAGCA ATTTGTCAAAGCGGAGCCCAAATCTCCTAAAAAGAAGAAGGTTAACTCCT CTAGGTCGTCATCTACTTCGGGAGAGGAGTCTGAACCCGAACCAGGGGAA ATGGTAGTCAACACTAAGGCAGTGGTGGTGCCGTCCCCAAAAGCGAAGGC CATCAAAACACCTGTAGCATCAACTCCGAAACCAAAGGCTGTAAAACCAG TTTCGTCCTCCGACTCCTCAACTTCGGACAGCGACACCGATGATGAACAG AGTCATCCGCCGGCAAAGAGTAAAAAGATGGAAAAGAACACCGAGGAGGA TGTTGTCTGCATGGGCTCTCAGGAGCGCCAGTTTACCATTACCGATGAGG AGGAAAGCACCGAACCTGAAGACGACAAGAAGGCCAGAAAGCAAAAAAAC AAGGGTAAAACCGTGGATGTGTGTGGCATATGCGACAAGAAGGGCCACAC CTCCTTCCAGTGTCAGATGATATGTCGTAATTGCTCCGGTAGTTATCATG GTCTCAAAAACTGTCCAAACCCGCCCAATCTAAATATTGCCATCCAGTCG TTTGTGGAGTTTGCCATGCAGCAAATGACTGCCTTTCATTGCGAGCAAGG ATTTGGATTTCCTGCTGGCACAGTCACAGCTCCAGTTTCAGCAAAACCCA AAAAGGACAAAAAGGCGTCAATAAAAAAGATAAAGAAGTCTTCACAGAAA AGGATGAAGGTGGAGCCGAAAGATCATGACGAAGAAGATGACGAGGAAGA TGACGACGAAGATGAAGATGACAGCAGCGAGAGCGATGACTCGGAGTCCA GCGAAGAGCCTCACCCAGCTCCTGTGTCCAAACAGAAGCGGAAACGAGGC ACCAAAGCCTCCGTATCGGCCGCAGCCAGTCTACCTCCTCAAGTGTTTCC ATTTCCCCTTCTAGGCGCCCCGGGCGCCCCTTTTAACTCCATGATGTATT CTTATAGAGCTCCGTTTAATTTTTCTAAATAGTTATAGCGTGAGTTAGTT GTAAAGGAACGTGAAAGATAAATACATTTTCAATACCAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1104..1185 | 324..239 | 123 | 64 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 272257..272539 | 1543..1825 | 100 | <- | Minus |
chr2L | 271945..272191 | 1891..2137 | 99 | == | Minus |
chr2L | 272588..274129 | 1..1542 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1620 | 463..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1620 | 463..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1620 | 463..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1620 | 463..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1620 | 463..2082 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..2137 | 1..2137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..2137 | 1..2137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1756 | 382..2137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..2137 | 1..2137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mbm-RA | 1..1756 | 382..2137 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 271912..272506 | 1543..2137 | 100 | <- | Minus |
2L | 272555..274096 | 1..1542 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 271912..272506 | 1543..2137 | 100 | <- | Minus |
2L | 272555..274096 | 1..1542 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 271912..272506 | 1543..2137 | 100 | <- | Minus |
2L | 272555..274096 | 1..1542 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 271912..272506 | 1543..2137 | 100 | <- | Minus |
arm_2L | 272555..274096 | 1..1542 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 271912..272506 | 1543..2137 | 100 | <- | Minus |
2L | 272555..274096 | 1..1542 | 100 | Minus |
Translation from 462 to 2081
> LD01582.pep MHNSGGQSGWNLSGEERKPFSNYGRNNQQRRSSGGGGRGSHSQNRAANGN WPDAGSEGGQNGNAFNKFRDPQQELDNHQPNKRGGRRNRGGGGGGGGWGG RRGNRGRDSNRRGGRNNSWQPKDQHVSPGQSNMLYFDNVGDFTEDPPLPR SSPAPSSLRQESLPPVTFAADLTPPPPVSVAPPDVAVTPEEPTVPLINIK KEKEMEHKSKIKQFVKAEPKSPKKKKVNSSRSSSTSGEESEPEPGEMVVN TKAVVVPSPKAKAIKTPVASTPKPKAVKPVSSSDSSTSDSDTDDEQSHPP AKSKKMEKNTEEDVVCMGSQERQFTITDEEESTEPEDDKKARKQKNKGKT VDVCGICDKKGHTSFQCQMICRNCSGSYHGLKNCPNPPNLNIAIQSFVEF AMQQMTAFHCEQGFGFPAGTVTAPVSAKPKKDKKASIKKIKKSSQKRMKV EPKDHDEEDDEEDDDEDEDDSSESDDSESSEEPHPAPVSKQKRKRGTKAS VSAAASLPPQVFPFPLLGAPGAPFNSMMYSYRAPFNFSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22854-PA | 587 | GF22854-PA | 152..587 | 115..539 | 573 | 46.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24667-PA | 541 | GG24667-PA | 1..541 | 1..539 | 1713 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10222-PA | 570 | GH10222-PA | 37..570 | 13..539 | 471 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mbm-PA | 539 | CG11604-PA | 1..539 | 1..539 | 2883 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15060-PA | 555 | GI15060-PA | 302..555 | 310..539 | 473 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11093-PA | 556 | GA11093-PA | 118..554 | 107..539 | 520 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16685-PA | 546 | GM16685-PA | 1..546 | 1..539 | 1916 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22973-PA | 552 | GD22973-PA | 1..552 | 1..539 | 1884 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17244-PA | 554 | GJ17244-PA | 15..554 | 22..539 | 546 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21067-PA | 554 | GK21067-PA | 122..554 | 106..539 | 469 | 39.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16305-PA | 555 | GE16305-PA | 1..555 | 1..539 | 1492 | 75.6 | Plus |
Translation from 462 to 2081
> LD01582.hyp MHNSGGQSGWNLSGEERKPFSNYGRNNQQRRSSGGGGRGSHSQNRAANGN WPDAGSEGGQNGNAFNKFRDPQQELDNHQPNKRGGRRNRGGGGGGGGWGG RRGNRGRDSNRRGGRNNSWQPKDQHVSPGQSNMLYFDNVGDFTEDPPLPR SSPAPSSLRQESLPPVTFAADLTPPPPVSVAPPDVAVTPEEPTVPLINIK KEKEMEHKSKIKQFVKAEPKSPKKKKVNSSRSSSTSGEESEPEPGEMVVN TKAVVVPSPKAKAIKTPVASTPKPKAVKPVSSSDSSTSDSDTDDEQSHPP AKSKKMEKNTEEDVVCMGSQERQFTITDEEESTEPEDDKKARKQKNKGKT VDVCGICDKKGHTSFQCQMICRNCSGSYHGLKNCPNPPNLNIAIQSFVEF AMQQMTAFHCEQGFGFPAGTVTAPVSAKPKKDKKASIKKIKKSSQKRMKV EPKDHDEEDDEEDDDEDEDDSSESDDSESSEEPHPAPVSKQKRKRGTKAS VSAAASLPPQVFPFPLLGAPGAPFNSMMYSYRAPFNFSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mbm-PA | 539 | CG11604-PA | 1..539 | 1..539 | 2883 | 100 | Plus |