BDGP Sequence Production Resources |
Search the DGRC for LD02105
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 21 |
Well: | 5 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG12084-RA |
Protein status: | LD02105.pep: gold |
Preliminary Size: | 2854 |
Sequenced Size: | 3146 |
Gene | Date | Evidence |
---|---|---|
CG12084 | 2001-01-01 | Release 2 assignment |
CG12084 | 2002-06-24 | Blastp of sequenced clone |
CG12084 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12084 | 2008-04-29 | Release 5.5 accounting |
CG12084 | 2008-08-15 | Release 5.9 accounting |
CG12084 | 2008-12-18 | 5.12 accounting |
3146 bp (3146 high quality bases) assembled on 2002-06-24
GenBank Submission: AY128434
> LD02105.complete TCACACTGGCGAGAAGAAAGAAAATAGAAACCAAAATAATGAAGTGATTT CCATACGCAAATCGTAAAATTAGAGAATAACAATTGGAATTTTCTGGCGC TCGAGTGCCGCGTGTAACGGTAAAACGCTGCGCAATCGCGGAAAAATCGC TCGAAGTTCGGAAAATCCGTTGGCAAAACGAACGCAAAGACAGAGCAGCA GTGGCAAAGCAAACGCAAAAGCAAAGACAAACGCAACGACAGAAGCAAAA GCAGCGAGGGATTTTGGAGGCTGCTTTTTTGGGGCGACACTAAAGCAAAA TAAAAGACAACAGGGCCATTATTGAGGCCCCACTGGCGGAGCACAAGAAC TGCGGCCCCAAGATGAGCTGCAAGGTGCGGCTGATGGAGGACGGCTCGCT GGACGAGGAGCCGCTGACCCTCAAGGAGATCGCCTACCAGAAGCTGTGCA ACAATCTGGACATCATTAGCAGCCACCGGCCAGATGGCCAGCGCGGCCTC AATCCGGGCATTGTGCTGCCCAACGAGATCTGCGACGGCTTCCTCGAGAA CTATCAGCGATTCAATCGCCCGCTGGACGACAGCGTCATCCGCCTCTTCG AGGACACACACCGCACTTCGCTCAAGATCGTCAATCTTCGCAACAGCACC CTAAGCAGTATAGGCTTGGAGACTCTGATGCGGCACAAACTGTTCGCTTT GTCCTTGTGGTACTGTGACATGATATCCGTTGGTTCCCACCACCTTCTGG CCCACTACGGCGACAGTCTGCGATCCCTGGAATTGGGCATCAGTTCCCAT CTGCTGCAGTACGCGGAGCCCAACGAGAAGGAGCCAGTGGACTTCCAGTT GACTTGTCCGCATCTGCGGCGGCTGGTGCTCAACGGTGTTGTGATGCACC ACCGCCTGCAGTTCGCTCACCTCCACGACTTGGGCCACCTGGACCTGACC TCCTGCGTGCTGGCCAACTTCAGCCTTGAGGCATTGGGCTCGCTGCCCAA TCTGCACACGCTCATCCTGTTCAATGTGTGGCCCATCGCCAACCAGCTGC ATGCGATCTGCTGCCTGAGGCGTCTGTGCACACTGGACATATCCATCTCC AGTTCCGGAAATGGCCACGGCACCTACGACCTGCCCGATCAGACGCTGGA GATGCTGATGGACAACTTGCGACATCTCACACATTTGGATATCTCTGGCA CGAATTTGGCCGGCAACGGTGTGGCCACCAAGGAGTCGACAACTACCAGT GGCATGCAGCAGAGCCCCAAAATGGAGCAACACTTTGCCCTCACAGACAT CCCGGGGCTAGCGTCCCGCACCCAGCGACCGCTGCAGTTCCTAGGCCTCT ATCACACGGCCCACTGGGCCTGCAAAAGACACGATATTCCAGCTTTGGAG GTAGCTGGCGATGCCAACGAGCAGCAAATCCTTACTGCGGCGCGTTATTA CCACGACAGACCAGTGCTTCTGACAAGAGTTCTCAACGACTTGTACCATC TCTTCCGCTTCGAGAACTGCAAGGACATACACACAGCACTGGATGTTGTG CTCTCCGCCATGGATCGGCATCTCAAGTTCAAGCACATGCAAATCTCCGG CAGTGCCACGCTGTTCTACATTGTCAAGGGCAGGGATCGATCCAAGTTTG GAGCACTACTGCGCAATCACATCATTCGCACGCTGCTCAATGGCATGGAG ATGCACATCACCGACGACACCATGCTGCGGAATGGTTACCTCACGCTCAC CCAGTTTCACATGCCAGTCGATGTGCTCTTCGAGTACGAGCGTCTCATCA AGATCCTGCTGCACGGCGTTTCTAAGACGGAGCAAGAGGGATTTGTCCAG CGCATAGCAATCTACCTGCTGAACACACTCGCTTGCCAGGTGGATGGGCG ACAGAAGCTCTTCCTGGGCGAGTTGGGCGTAGTTAGTACCATGTTCACGT TGATAAAGGATCGGCTGACTCGCTCCGTTTTCGACGATGTGATGGAGGTG GCTTGGTCCACCATGTGGAACGTAACCGATGAGACTGCTATTAATTGTAA GAGATTCCTCGATGGACGTGGCATGGAGTATTTCCTTAAGTGTTTACATA CCTTCCCGGATCGTGACGAGCTGTTGCGCAACATGATGGGCCTGCTGGGC AATGTGGCCGAGGTGAAGTGGCTGCGGCCCAAGCTGATGACCCAGGAGTT CATTGAGGTGTTTGCCCGTCTGCTGGACTCCCTGAGCGATGGCATCGAGG TGGGTGGTGCTAGTGCGAGTGTGGTGGCGAGAGTGCGGGAGAGAGAGATG GCCAGTGCTAACCATGCCTACCTGCGCTTCCAGGTCAGCTACAATGCGGC TGGAGTGCTGGCGCACATTGCCTCGGACGGAGCGGATGCCTGGACGATCA AGACGCCCAGCCGGGAGCACGTGCTGGAGCGCATGGTGGCCGCCATTCAG CGGTGGAACATCAAGAGCGAGCGGAACATCAACTACCGCAGCTTTGAGCC GATCCTCAGCCTGGTGCGCTGCTACGAGACGCCCCAGTGCCAACATTGGG CTGTTTGGGCCCTGGCCAATCTGACACAGGTTTATCCCGAAAAATATTGC AAGCTGGTGGAGCAGGAGAACGGCATCCAGATCCTCAACGAGCTAATCGA GCACGAGAGTCCCTACTGCGAGATCAAGCGCATCGCTCGCCTGGTCATAG AGCAGTGCGACTCCGGATCGGAACGCATGGTCGTCGACGGCTAAGCGGAT ATTTAGGATAACACGTAGCTTTAGGAGTCGAGTTTGTTGTAATGTTTTTT TTCTGCTTCCTCTGTTTCCCGTTTTAAAGCAAGTGCATGTGTTATGTGGT TCAAGAGATTCTTCCTTGACTTTTATGTTTACAGCGAGAGCAGCAGATAC ATAGATGCAAGTTTAAACTATGCGAGAGTTAAGCAACTAAATCTAATGAT GCAGAAATATTCGATAATTACATAATTACTAGATTATATATGTATATGAT GTATCACATGTTGTAAGCCAGCGATCTTTTTAGGCCTTCAGAAGTGTAAA TATTGTTAAAACCGGAAAGAGGAAGACATTGGAGTAGCAAGCAAGGCTGC TGGAGATTAAATAAATCCTTAAGAATTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 1492864..1493805 | 1603..662 | 4665 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 1490905..1491458 | 3128..2575 | 2740 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 1491517..1492002 | 2581..2096 | 2400 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 1494124..1494483 | 664..305 | 1800 | 100 | Minus |
chr3L | 24539361 | chr3L | 1495846..1496151 | 306..1 | 1530 | 100 | Minus |
chr3L | 24539361 | chr3L | 1492629..1492802 | 1775..1602 | 870 | 100 | Minus |
chr3L | 24539361 | chr3L | 1492411..1492573 | 1937..1775 | 815 | 100 | Minus |
chr3L | 24539361 | chr3L | 1492181..1492342 | 2099..1938 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 1493329..1494270 | 1603..662 | 4710 | 100 | Minus |
3L | 28110227 | 3L | 1491368..1491923 | 3130..2575 | 2780 | 100 | Minus |
3L | 28110227 | 3L | 1491982..1492467 | 2581..2096 | 2415 | 99.8 | Minus |
3L | 28110227 | 3L | 1494589..1494948 | 664..305 | 1800 | 100 | Minus |
3L | 28110227 | 3L | 1496318..1496623 | 306..1 | 1530 | 100 | Minus |
3L | 28110227 | 3L | 1493094..1493267 | 1775..1602 | 870 | 100 | Minus |
3L | 28110227 | 3L | 1492876..1493038 | 1937..1775 | 815 | 100 | Minus |
3L | 28110227 | 3L | 1492646..1492807 | 2099..1938 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 1493329..1494270 | 1603..662 | 4710 | 100 | Minus |
3L | 28103327 | 3L | 1491368..1491923 | 3130..2575 | 2780 | 100 | Minus |
3L | 28103327 | 3L | 1491982..1492467 | 2581..2096 | 2415 | 99.7 | Minus |
3L | 28103327 | 3L | 1494589..1494948 | 664..305 | 1800 | 100 | Minus |
3L | 28103327 | 3L | 1496318..1496623 | 306..1 | 1530 | 100 | Minus |
3L | 28103327 | 3L | 1493094..1493267 | 1775..1602 | 870 | 100 | Minus |
3L | 28103327 | 3L | 1492876..1493038 | 1937..1775 | 815 | 100 | Minus |
3L | 28103327 | 3L | 1492646..1492807 | 2099..1938 | 810 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 4395..4477 | 854..772 | 116 | 65.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1492629..1492800 | 1604..1775 | 100 | <- | Minus |
chr3L | 1490905..1491453 | 2580..3128 | 99 | <- | Minus |
chr3L | 1491519..1491998 | 2100..2579 | 99 | <- | Minus |
chr3L | 1492181..1492342 | 1938..2099 | 100 | <- | Minus |
chr3L | 1492411..1492572 | 1776..1937 | 100 | <- | Minus |
chr3L | 1492864..1493803 | 664..1603 | 99 | <- | Minus |
chr3L | 1494125..1494481 | 307..663 | 100 | <- | Minus |
chr3L | 1495846..1496151 | 1..306 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 1..2382 | 363..2744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 1..2382 | 363..2744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 1..2382 | 363..2744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 1..2382 | 363..2744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 1..2382 | 363..2744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 45..3172 | 1..3128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 45..3172 | 1..3128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 21..3148 | 1..3128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 45..3172 | 1..3128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12084-RA | 21..3148 | 1..3128 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1493094..1493265 | 1604..1775 | 100 | <- | Minus |
3L | 1491370..1491918 | 2580..3128 | 100 | <- | Minus |
3L | 1491984..1492463 | 2100..2579 | 100 | <- | Minus |
3L | 1492646..1492807 | 1938..2099 | 100 | <- | Minus |
3L | 1492876..1493037 | 1776..1937 | 100 | <- | Minus |
3L | 1493329..1494268 | 664..1603 | 100 | <- | Minus |
3L | 1494590..1494946 | 307..663 | 100 | <- | Minus |
3L | 1496318..1496623 | 1..306 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1493094..1493265 | 1604..1775 | 100 | <- | Minus |
3L | 1491370..1491918 | 2580..3128 | 100 | <- | Minus |
3L | 1491984..1492463 | 2100..2579 | 100 | <- | Minus |
3L | 1492646..1492807 | 1938..2099 | 100 | <- | Minus |
3L | 1492876..1493037 | 1776..1937 | 100 | <- | Minus |
3L | 1493329..1494268 | 664..1603 | 100 | <- | Minus |
3L | 1494590..1494946 | 307..663 | 100 | <- | Minus |
3L | 1496318..1496623 | 1..306 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1493094..1493265 | 1604..1775 | 100 | <- | Minus |
3L | 1491370..1491918 | 2580..3128 | 100 | <- | Minus |
3L | 1491984..1492463 | 2100..2579 | 100 | <- | Minus |
3L | 1492646..1492807 | 1938..2099 | 100 | <- | Minus |
3L | 1492876..1493037 | 1776..1937 | 100 | <- | Minus |
3L | 1493329..1494268 | 664..1603 | 100 | <- | Minus |
3L | 1494590..1494946 | 307..663 | 100 | <- | Minus |
3L | 1496318..1496623 | 1..306 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1493094..1493265 | 1604..1775 | 100 | <- | Minus |
arm_3L | 1491370..1491918 | 2580..3128 | 100 | <- | Minus |
arm_3L | 1491984..1492463 | 2100..2579 | 100 | <- | Minus |
arm_3L | 1492646..1492807 | 1938..2099 | 100 | <- | Minus |
arm_3L | 1492876..1493037 | 1776..1937 | 100 | <- | Minus |
arm_3L | 1493329..1494268 | 664..1603 | 100 | <- | Minus |
arm_3L | 1494590..1494946 | 307..663 | 100 | <- | Minus |
arm_3L | 1496318..1496623 | 1..306 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1491370..1491918 | 2580..3128 | 100 | <- | Minus |
3L | 1491984..1492463 | 2100..2579 | 100 | <- | Minus |
3L | 1492646..1492807 | 1938..2099 | 100 | <- | Minus |
3L | 1492876..1493037 | 1776..1937 | 100 | <- | Minus |
3L | 1493094..1493265 | 1604..1775 | 100 | <- | Minus |
3L | 1493329..1494268 | 664..1603 | 100 | <- | Minus |
3L | 1494590..1494946 | 307..663 | 100 | <- | Minus |
3L | 1496318..1496623 | 1..306 | 100 | Minus |
Translation from 362 to 2743
> LD02105.pep MSCKVRLMEDGSLDEEPLTLKEIAYQKLCNNLDIISSHRPDGQRGLNPGI VLPNEICDGFLENYQRFNRPLDDSVIRLFEDTHRTSLKIVNLRNSTLSSI GLETLMRHKLFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISSHLLQY AEPNEKEPVDFQLTCPHLRRLVLNGVVMHHRLQFAHLHDLGHLDLTSCVL ANFSLEALGSLPNLHTLILFNVWPIANQLHAICCLRRLCTLDISISSSGN GHGTYDLPDQTLEMLMDNLRHLTHLDISGTNLAGNGVATKESTTTSGMQQ SPKMEQHFALTDIPGLASRTQRPLQFLGLYHTAHWACKRHDIPALEVAGD ANEQQILTAARYYHDRPVLLTRVLNDLYHLFRFENCKDIHTALDVVLSAM DRHLKFKHMQISGSATLFYIVKGRDRSKFGALLRNHIIRTLLNGMEMHIT DDTMLRNGYLTLTQFHMPVDVLFEYERLIKILLHGVSKTEQEGFVQRIAI YLLNTLACQVDGRQKLFLGELGVVSTMFTLIKDRLTRSVFDDVMEVAWST MWNVTDETAINCKRFLDGRGMEYFLKCLHTFPDRDELLRNMMGLLGNVAE VKWLRPKLMTQEFIEVFARLLDSLSDGIEVGGASASVVARVREREMASAN HAYLRFQVSYNAAGVLAHIASDGADAWTIKTPSREHVLERMVAAIQRWNI KSERNINYRSFEPILSLVRCYETPQCQHWAVWALANLTQVYPEKYCKLVE QENGIQILNELIEHESPYCEIKRIARLVIEQCDSGSERMVVDG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25033-PA | 790 | GF25033-PA | 1..788 | 1..790 | 4015 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14597-PA | 792 | GG14597-PA | 1..790 | 1..790 | 4185 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15205-PA | 778 | GH15205-PA | 1..775 | 1..789 | 3784 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12084-PA | 793 | CG12084-PA | 1..793 | 1..793 | 4156 | 100 | Plus |
CG12084-PB | 765 | CG12084-PB | 1..765 | 1..793 | 3982 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16723-PA | 779 | GI16723-PA | 1..777 | 1..790 | 3793 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22586-PA | 791 | GL22586-PA | 1..789 | 1..790 | 3902 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11384-PA | 791 | GA11384-PA | 1..789 | 1..790 | 3906 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14212-PA | 793 | GM14212-PA | 1..792 | 1..792 | 4230 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13474-PA | 793 | GD13474-PA | 1..792 | 1..792 | 4228 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12467-PA | 778 | GJ12467-PA | 1..776 | 1..790 | 3798 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17205-PA | 781 | GK17205-PA | 1..779 | 1..790 | 3859 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20956-PA | 792 | GE20956-PA | 1..790 | 1..790 | 4186 | 98.4 | Plus |
Translation from 362 to 2743
> LD02105.hyp MSCKVRLMEDGSLDEEPLTLKEIAYQKLCNNLDIISSHRPDGQRGLNPGI VLPNEICDGFLENYQRFNRPLDDSVIRLFEDTHRTSLKIVNLRNSTLSSI GLETLMRHKLFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISSHLLQY AEPNEKEPVDFQLTCPHLRRLVLNGVVMHHRLQFAHLHDLGHLDLTSCVL ANFSLEALGSLPNLHTLILFNVWPIANQLHAICCLRRLCTLDISISSSGN GHGTYDLPDQTLEMLMDNLRHLTHLDISGTNLAGNGVATKESTTTSGMQQ SPKMEQHFALTDIPGLASRTQRPLQFLGLYHTAHWACKRHDIPALEVAGD ANEQQILTAARYYHDRPVLLTRVLNDLYHLFRFENCKDIHTALDVVLSAM DRHLKFKHMQISGSATLFYIVKGRDRSKFGALLRNHIIRTLLNGMEMHIT DDTMLRNGYLTLTQFHMPVDVLFEYERLIKILLHGVSKTEQEGFVQRIAI YLLNTLACQVDGRQKLFLGELGVVSTMFTLIKDRLTRSVFDDVMEVAWST MWNVTDETAINCKRFLDGRGMEYFLKCLHTFPDRDELLRNMMGLLGNVAE VKWLRPKLMTQEFIEVFARLLDSLSDGIEVGGASASVVARVREREMASAN HAYLRFQVSYNAAGVLAHIASDGADAWTIKTPSREHVLERMVAAIQRWNI KSERNINYRSFEPILSLVRCYETPQCQHWAVWALANLTQVYPEKYCKLVE QENGIQILNELIEHESPYCEIKRIARLVIEQCDSGSERMVVDG*