BDGP Sequence Production Resources |
Search the DGRC for LD02194
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 21 |
Well: | 94 |
Vector: | pBS SK- |
Associated Gene/Transcript | Rep-RA |
Protein status: | LD02194.pep: gold |
Preliminary Size: | 1893 |
Sequenced Size: | 1884 |
Gene | Date | Evidence |
---|---|---|
CG8432 | 2001-01-01 | Release 2 assignment |
CG8432 | 2001-10-10 | Blastp of sequenced clone |
CG8432 | 2003-01-01 | Sim4 clustering to Release 3 |
Rep | 2008-04-29 | Release 5.5 accounting |
Rep | 2008-08-15 | Release 5.9 accounting |
Rep | 2008-12-18 | 5.12 accounting |
1884 bp (1884 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061052
> LD02194.complete TAAATTCGCAATAAATTCACGGAATACTTTATTTATCCGTAAATATAGTT TAAATATCAGTGCAAATAAGGCTTAGAACATGTTGGATGACCTGCCGGAG CAGTTTGACCTGGTCGTCATAGGCACAGGCTTCACCGAGTCCTGCATCGC CGCTGCGGGCAGCAGGATAGGCAAATCGGTGCTCCACCTGGATAGTAATG AGTACTACGGGGATGTTTGGAGCTCCTTCTCTATGGATGCTCTATGTGCC CGCTTGGACCAGGAAGTCGAGCCTCATTCTGCATTGCGAAACGCAAGGTA CACCTGGCATTCCATGGAAAAAGAATCAGAAACAGATGCACAATCCTGGA ATAGGGACTCAGTGCTGGCCAAGTCGCGACGCTTCAGCTTGGATCTATGC CCGCGCATTTTATACGCAGCCGGGGAGCTGGTGCAGTTGCTCATCAAGTC GAACATCTGCCGCTATGCTGAATTCCGAGCCGTGGACCATGTGTGCATGC GCCACAATGGTGAAATTGTGTCCGTGCCCTGCTCCCGTAGCGATGTCTTC AACACCAAAACACTGACCATCGTGGAAAAGCGCTTGCTGATGAAATTTCT CACCGCCTGCAACGATTACGGCGAGGACAAGTGCAACGAGGACTCGTTGG AATTCCGGGGACGAACGTTTCTGGAATATTTGCAGGCGCAGCGGGTGACC GAAAAGATATCGTCGTGCGTGATGCAGGCCATTGCCATGTGCGGCCCCAG CACCAGCTTCGAGGAGGGTATGCAGCGCACACAACGATTTCTGGGCAGTC TGGGCCGCTATGGCAACACACCCTTTCTCTTTCCCATGTATGGCTGCGGG GAATTGCCGCAGTGCTTCTGCCGTTTGTGCGCTGTTTATGGTGGCATTTA CTGCCTAAAGCGAGCCGTTGACGACATTGCCTTAGATTCCAATTCGAATG AGTTCCTGCTGAGCAGCGCAGGGAAAACTTTGCGTGCCAAGAATGTGGTC TCTGCCCCTGGCTATACACCAGTTTCAAAGGGCATCGAGTTGAAGCCGCA CATCTCACGTGGCTTGTTCATATCGTCCAGTCCCCTGGGCAATGAGGAGC TGAACAAGGGAGGTGGTGGTGTAAATCTTCTTCGACTACTTGACAATGAA GGTGGACGGGAAGCCTTCCTAATACAACTGTCGCACTACACGGGAGCCTG TCCCGAGGGTTTATATATCTTCCATCTGACCACGCCAGCGTTGAGCGAGG ATCCAGCGTCTGATCTAGCCATTTTCACTAGCCAACTCTTCGATCAATCA GACGCACAAATAATATTTAGCTCATACTTCACAATTGCTGCCCAGTCTAG TAAAAGTCCCGCTGCCGAGCATATTTACTACACCGATCCACCTACCTACG AGCTGGATTATGACGCGGCCATTGCCAATGCTCGCGACATATTTGGCAAA ATGTTCCCAGATGCCGACTTTTTGCCACGAGCCCCAGATCCAGAGGAGAT TGTCGTGGATGGTGAAGACCCTAGTGCCTTGAACGAGCACACTTTGCCCG AAGATTTGCGGGCACAATTGCACGACATGCAGCAGGCAACTCAGGAAATG GATATACAAGAGTAGTCATACTAAAATAAAAAGGAGGTTTCCTTGGTCTA CATATATCATTACTTATTACAAAATTTTCTTAAGTATCTTTCGAATAAGT TATATATTGTATGCAATTTTTTGATTCATATATTCCTATATATTTATTAT GTAAATTATTTATAATTGCTAAAAGTACTAGGTATATATAAATGTTTAAA TGTGAGTGTTTCTGTGCATTTTGCTTTGATAAATATATGTTCGAAAAATA TGCATTCCAATGCGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15379512..15380600 | 126..1214 | 5430 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 15380658..15381308 | 1215..1865 | 3210 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 15379328..15379456 | 1..129 | 630 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19492329..19493417 | 126..1214 | 5445 | 100 | Plus |
2R | 25286936 | 2R | 19493475..19494132 | 1215..1872 | 3275 | 99.8 | Plus |
2R | 25286936 | 2R | 19492145..19492273 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 19493528..19494616 | 126..1214 | 5445 | 100 | Plus |
2R | 25260384 | 2R | 19494674..19495331 | 1215..1872 | 3275 | 99.8 | Plus |
2R | 25260384 | 2R | 19493344..19493472 | 1..129 | 645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15379328..15379455 | 1..128 | 99 | -> | Plus |
chr2R | 15379515..15380600 | 129..1214 | 99 | -> | Plus |
chr2R | 15380658..15381308 | 1215..1865 | 94 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 1..1536 | 80..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 1..1536 | 80..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 1..1536 | 80..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 1..1536 | 80..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 1..1536 | 80..1615 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 55..1919 | 1..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 55..1919 | 1..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 59..1923 | 1..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 55..1919 | 1..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rep-RA | 59..1923 | 1..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19492145..19492272 | 1..128 | 100 | -> | Plus |
2R | 19492332..19493417 | 129..1214 | 100 | -> | Plus |
2R | 19493475..19494125 | 1215..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19492145..19492272 | 1..128 | 100 | -> | Plus |
2R | 19492332..19493417 | 129..1214 | 100 | -> | Plus |
2R | 19493475..19494125 | 1215..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19492145..19492272 | 1..128 | 100 | -> | Plus |
2R | 19492332..19493417 | 129..1214 | 100 | -> | Plus |
2R | 19493475..19494125 | 1215..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15379650..15379777 | 1..128 | 100 | -> | Plus |
arm_2R | 15379837..15380922 | 129..1214 | 100 | -> | Plus |
arm_2R | 15380980..15381630 | 1215..1865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19493531..19494616 | 129..1214 | 100 | -> | Plus |
2R | 19494674..19495324 | 1215..1865 | 100 | Plus | |
2R | 19493344..19493471 | 1..128 | 100 | -> | Plus |
Translation from 79 to 1614
> LD02194.hyp MLDDLPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSF SMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSR RFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVP CSRSDVFNTKTLTIVEKRLLMKFLTACNDYGEDKCNEDSLEFRGRTFLEY LQAQRVTEKISSCVMQAIAMCGPSTSFEEGMQRTQRFLGSLGRYGNTPFL FPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKT LRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGNEELNKGGGGVNL LRLLDNEGGREAFLIQLSHYTGACPEGLYIFHLTTPALSEDPASDLAIFT SQLFDQSDAQIIFSSYFTIAAQSSKSPAAEHIYYTDPPTYELDYDAAIAN ARDIFGKMFPDADFLPRAPDPEEIVVDGEDPSALNEHTLPEDLRAQLHDM QQATQEMDIQE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rep-PA | 511 | CG8432-PA | 1..511 | 1..511 | 2678 | 100 | Plus |
Gdi-PC | 443 | CG4422-PC | 3..366 | 7..396 | 351 | 26.1 | Plus |
Gdi-PB | 443 | CG4422-PB | 3..366 | 7..396 | 351 | 26.1 | Plus |
Gdi-PA | 443 | CG4422-PA | 3..366 | 7..396 | 351 | 26.1 | Plus |
Translation from 79 to 1614
> LD02194.pep MLDDLPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSF SMDALCARLDQEVEPHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSR RFSLDLCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVP CSRSDVFNTKTLTIVEKRLLMKFLTACNDYGEDKCNEDSLEFRGRTFLEY LQAQRVTEKISSCVMQAIAMCGPSTSFEEGMQRTQRFLGSLGRYGNTPFL FPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKT LRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGNEELNKGGGGVNL LRLLDNEGGREAFLIQLSHYTGACPEGLYIFHLTTPALSEDPASDLAIFT SQLFDQSDAQIIFSSYFTIAAQSSKSPAAEHIYYTDPPTYELDYDAAIAN ARDIFGKMFPDADFLPRAPDPEEIVVDGEDPSALNEHTLPEDLRAQLHDM QQATQEMDIQE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11718-PA | 517 | GF11718-PA | 1..517 | 1..511 | 2445 | 85.7 | Plus |
Dana\GF21994-PA | 443 | GF21994-PA | 1..366 | 5..396 | 370 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21980-PA | 511 | GG21980-PA | 1..511 | 1..511 | 2624 | 94.5 | Plus |
Dere\GG24025-PA | 443 | GG24025-PA | 1..366 | 5..396 | 374 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23002-PA | 505 | GH23002-PA | 1..505 | 1..511 | 1883 | 70.3 | Plus |
Dgri\GH10775-PA | 443 | GH10775-PA | 1..288 | 5..314 | 367 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rep-PA | 511 | CG8432-PA | 1..511 | 1..511 | 2678 | 100 | Plus |
Gdi-PC | 443 | CG4422-PC | 3..366 | 7..396 | 351 | 26.1 | Plus |
Gdi-PB | 443 | CG4422-PB | 3..366 | 7..396 | 351 | 26.1 | Plus |
Gdi-PA | 443 | CG4422-PA | 3..366 | 7..396 | 351 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18968-PA | 517 | GI18968-PA | 1..517 | 1..511 | 1983 | 71.6 | Plus |
Dmoj\GI17638-PA | 443 | GI17638-PA | 1..288 | 5..314 | 373 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11541-PA | 522 | GL11541-PA | 1..522 | 1..511 | 2076 | 72.4 | Plus |
Dper\GL25634-PA | 443 | GL25634-PA | 1..366 | 5..396 | 371 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21074-PA | 522 | GA21074-PA | 1..522 | 1..511 | 2070 | 72 | Plus |
Dpse\GA18172-PA | 443 | GA18172-PA | 1..366 | 5..396 | 371 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21968-PA | 513 | GM21968-PA | 1..511 | 1..511 | 2683 | 96.9 | Plus |
Dsec\GM12441-PA | 443 | GM12441-PA | 1..366 | 5..396 | 376 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11461-PA | 511 | GD11461-PA | 1..511 | 1..511 | 2681 | 96.7 | Plus |
Dsim\GD22354-PA | 443 | GD22354-PA | 1..366 | 5..396 | 376 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20912-PA | 508 | GJ20912-PA | 1..508 | 1..511 | 2045 | 74 | Plus |
Dvir\GJ18203-PA | 443 | GJ18203-PA | 1..366 | 5..396 | 375 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15875-PA | 512 | GK15875-PA | 1..510 | 1..506 | 2022 | 73.4 | Plus |
Dwil\GK24043-PA | 412 | GK24043-PA | 1..345 | 1..414 | 1242 | 59.7 | Plus |
Dwil\GK21153-PA | 202 | GK21153-PA | 1..200 | 308..506 | 678 | 66.7 | Plus |
Dwil\GK24240-PA | 443 | GK24240-PA | 1..288 | 5..314 | 374 | 28.5 | Plus |