BDGP Sequence Production Resources |
Search the DGRC for LD02427
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 24 |
Well: | 27 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG5727-RA |
Protein status: | LD02427.pep: gold |
Preliminary Size: | 904 |
Sequenced Size: | 721 |
Gene | Date | Evidence |
---|---|---|
CG5727 | 2001-01-01 | Release 2 assignment |
CG5727 | 2002-06-10 | Blastp of sequenced clone |
CG5727 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5727 | 2008-04-29 | Release 5.5 accounting |
CG5727 | 2008-08-15 | Release 5.9 accounting |
CG5727 | 2008-12-18 | 5.12 accounting |
721 bp (721 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121638
> LD02427.complete AGACCATGAAGTCCGAGAAACTGAAACGAAACTTTTGGGTCTCCGCCGAA ATAGAGTGCATGCTCGACCTGATTAAGGAGGTGAACAACTGCCAGGGAGC CCTGTCCACCAGCACCACCCAGTACACCTTCATCCAAATCGCCAATCAGA TGAAAAAAAGGGGTTTTCCAAACAAGTCGCCCACCCAAATACGCAGAAAA TGGTTTCAAATGAAGAGCGCCTATCTGTGTTACAAAAAGGGAAATGTTGA TCGACTATTTCTGATACCCGAGAAATTCCGCAACGCCATCGCTGAGTTCG TAGAAAGTGGCGAGAAAATCGGACGTTCCAATCTATCCACCATTTCAAGT GGAACCCCAGCTATCGTGCAGCAAAATCAGGAAGTACACTCAGAGGAAGA CACTTCGCCCATGGATATATTCCTGAATCAGATCCGTAAAAACAATAAAA TGATTAATTCGGAGTTCTTTAGGATGGAAGAATCGTTACAGCAATTCGAA CAGAAATGCCAGTTTATTAGAGACAAAAACATAGCCAAGCTCATCGATGG TTATTAGCCAAATAAATATACAAATTCCAGATATATAGTAAATAAGTTTT AATAAAATGTAAGCAAAACTGATATATTTTTTGTTTATTTCGTATATAAT GCATTGTTGTAAAGGTAGAAACACAATAAATGAGCACTTTATCACATATA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5727-RA | 822 | CG5727-RA | 106..805 | 1..700 | 3500 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6845..6990 | 561..698 | 153 | 59.6 | Plus |
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 1477..1533 | 298..352 | 109 | 68.4 | Plus |
Dbuz\ISBu2 | 726 | Dbuz\ISBu2 ISBU2 726bp | 251..516 | 688..437 | 108 | 54.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10208704..10209018 | 385..699 | 100 | <- | Minus |
chr2L | 10209076..10209459 | 1..384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 1..552 | 6..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 1..552 | 6..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 1..552 | 6..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 1..552 | 6..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 1..552 | 6..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 62..760 | 1..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 93..791 | 1..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 74..772 | 1..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 62..760 | 1..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5727-RA | 74..772 | 1..699 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10209853..10210167 | 385..699 | 100 | <- | Minus |
2L | 10210225..10210608 | 1..384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10209853..10210167 | 385..699 | 100 | <- | Minus |
2L | 10210225..10210608 | 1..384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10209853..10210167 | 385..699 | 100 | <- | Minus |
2L | 10210225..10210608 | 1..384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10209853..10210167 | 385..699 | 100 | <- | Minus |
arm_2L | 10210225..10210608 | 1..384 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10209853..10210167 | 385..699 | 100 | <- | Minus |
2L | 10210225..10210608 | 1..384 | 100 | Minus |
Translation from 2 to 556
> LD02427.hyp TMKSEKLKRNFWVSAEIECMLDLIKEVNNCQGALSTSTTQYTFIQIANQM KKRGFPNKSPTQIRRKWFQMKSAYLCYKKGNVDRLFLIPEKFRNAIAEFV ESGEKIGRSNLSTISSGTPAIVQQNQEVHSEEDTSPMDIFLNQIRKNNKM INSEFFRMEESLQQFEQKCQFIRDKNIAKLIDGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5727-PA | 183 | CG5727-PA | 1..183 | 2..184 | 947 | 100 | Plus |
Translation from 5 to 556
> LD02427.pep MKSEKLKRNFWVSAEIECMLDLIKEVNNCQGALSTSTTQYTFIQIANQMK KRGFPNKSPTQIRRKWFQMKSAYLCYKKGNVDRLFLIPEKFRNAIAEFVE SGEKIGRSNLSTISSGTPAIVQQNQEVHSEEDTSPMDIFLNQIRKNNKMI NSEFFRMEESLQQFEQKCQFIRDKNIAKLIDGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19657-PA | 193 | GF19657-PA | 1..192 | 1..181 | 754 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23971-PA | 186 | GG23971-PA | 1..182 | 1..182 | 923 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13550-PA | 185 | GH13550-PA | 1..183 | 1..180 | 532 | 59.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5727-PA | 183 | CG5727-PA | 1..183 | 1..183 | 947 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18689-PA | 177 | GI18689-PA | 1..177 | 1..182 | 552 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10052-PA | 175 | GL10052-PA | 1..175 | 1..181 | 601 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19087-PA | 175 | GA19087-PA | 1..175 | 1..181 | 598 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11944-PA | 183 | GM11944-PA | 1..183 | 1..183 | 958 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22295-PA | 183 | GD22295-PA | 1..183 | 1..183 | 958 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17537-PA | 177 | GJ17537-PA | 1..177 | 1..182 | 499 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18995-PA | 185 | GK18995-PA | 1..184 | 1..181 | 530 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26339-PA | 183 | GE26339-PA | 1..183 | 1..183 | 921 | 93.4 | Plus |