BDGP Sequence Production Resources |
Search the DGRC for LD02552
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 25 |
Well: | 52 |
Vector: | pBS SK- |
Associated Gene/Transcript | Ir76a-RC |
Protein status: | LD02552.pep: wuzgold |
Preliminary Size: | 1739 |
Sequenced Size: | 1634 |
Gene | Date | Evidence |
---|---|---|
CG8533 | 2001-01-01 | Release 2 assignment |
CG8533 | 2001-10-10 | Blastp of sequenced clone |
CG8533 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8533 | 2008-04-29 | Release 5.5 accounting |
CG8533 | 2008-08-15 | Release 5.9 accounting |
CG8533 | 2008-12-18 | 5.12 accounting |
1634 bp (1634 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061057
> LD02552.complete TTATCTGTCCGGTTATATATTCCAAGGTAGGATAAGTGCAGTGAATTGAA ATAATTACACATGCTCACCATTTGAATTGCTAGATCAACCTAACATCTTG GTAATTACTTCACAATACCTGAACTCAAGCACTTTTGAAATTAAAACGAA CCGATTTGTCGGTCCGCGAAACTTTAACAAAAACCCGGAGCCTGTTGAGT TTTACATACTCCAGCGTTTCGATGCCAAGGGTACGAAAGCTACTTGGGAA ACCCAGAGTGCAATGTCCAGCAAGATGCGAAACCTCAAGGGACGCGAGGT AGTCATAGGCATCTTCGACTACAAGCCTTTTATGCTATTGGATTATGAAA AGCCACCATTATATTATGATCGTTTTATGAACACGACGGATGTAACCATT GATGGAACAGATATTCAACTAATGCTCATTTTCTGCGAGTTGTACAACTG CACCATTCAGGTGGACACATCTGAACCATACGACTGGGGTGACATCTACT TGAATGCCTCGGGCTATGGTCTGGTTGGAATGATCCTCGATAGACGAAAC GATTACGGAGTAGGGGGCATGTATTTGTGGTACGAGGCGTACGAGTATAT GGACATGACTCATTTTCTGGGACGATCTGGAGTAACCTGTCTGGTGCCCG CTCCGAACCGTTTAATCAGCTGGACGCTCCTGCTCCGACCATTCCAGTTT GTCCTCTGGATGTGCGTGATGCTCTGCCTTCTGCTCGAGAGCTTAGCTCT TGGTATAACCCGTCGCTGGGAACACTCGTCGGTTGCGGCAGGCAATTCCT GGATCAGTAGTCTGCGCTTCGGTTGCATCAGTACGCTGAAACTTTTCGTA AATCAGAGCACCAATTATGTGACCAGCTCGTATGCTCTAAGAACCGTCCT AGTGGCCAGCTACATGATCGACATTATATTGACCACTGTGTACAGTGGCG GTCTGGCGGCCATCCTCACTTTGCCCACTTTAGAGGAAGCGGCGGACTCT CGCCAACGTCTCTTCGACCATAAGCTCATTTGGACGGGGACTTCACAGGC CTGGATTACCACCATTGACGAGCGATCGGCCGACCCAGTTCTTCTTGGTT TAATGGAGCATTACCGAGTTTACGATGCCAATTTAATATCCGCCTTCTCG CACACGGAGCAAATGGGATTTGTCGTCGAGCGCCTTCAGTTTGGTCATTT GGGCAACACCGAGCTAATAGAAAACGATGCCCTAAAGCGGCTGAAACTTA TGGTGGATGATATTTACTTTGCATTTACGGTGGCGTTTGTGCCGCGACTG TGGCCGCACTTAAATGCCTACAACGACTTCATTCTGGCTTGGCATTCCTC GGGCTTTGACAAATTCTGGGAATGGAAGATCGCCGCCGAATACATGAATG CGCACCGCCAAAATCGCATCGTGGCATCTGAGAAAACGAACCTAGATATA GGACCTGTTAAACTTGGCATTGATAATTTTATTGGCCTAATCCTGCTTTG GTGCTTCGGCATGATTTGTAGCCTTCTGACATTTCTCGGAGAACTCTGGA GGGGACAGGGGTAGTTTAATTGTTTTTATTTTCTATATACATCTACAATA TCAAAACTAAACTGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ir76a-RC | 1715 | Ir76a-RC | 87..1703 | 1..1617 | 8085 | 100 | Plus |
Ir76a-RA | 1829 | Ir76a-RA | 282..1817 | 82..1617 | 7680 | 100 | Plus |
Ir76a.d | 1808 | Ir76a.d | 537..1808 | 343..1614 | 6345 | 99.9 | Plus |
Ir76a.d | 1808 | Ir76a.d | 263..527 | 82..346 | 1325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19792275..19792804 | 1085..1614 | 2650 | 100 | Plus |
chr3L | 24539361 | chr3L | 19791712..19792217 | 579..1084 | 2530 | 100 | Plus |
chr3L | 24539361 | chr3L | 19790960..19791306 | 1..347 | 1735 | 100 | Plus |
chr3L | 24539361 | chr3L | 19791364..19791491 | 343..470 | 625 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 19791538..19791654 | 466..582 | 570 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19802898..19803430 | 1085..1617 | 2665 | 100 | Plus |
3L | 28110227 | 3L | 19802335..19802840 | 579..1084 | 2530 | 100 | Plus |
3L | 28110227 | 3L | 19801583..19801929 | 1..347 | 1735 | 100 | Plus |
3L | 28110227 | 3L | 19801987..19802114 | 343..470 | 625 | 99.2 | Plus |
3L | 28110227 | 3L | 19802161..19802277 | 466..582 | 570 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19795998..19796530 | 1085..1617 | 2665 | 100 | Plus |
3L | 28103327 | 3L | 19795435..19795940 | 579..1084 | 2530 | 100 | Plus |
3L | 28103327 | 3L | 19794683..19795029 | 1..347 | 1735 | 100 | Plus |
3L | 28103327 | 3L | 19795087..19795214 | 343..470 | 625 | 99.2 | Plus |
3L | 28103327 | 3L | 19795261..19795377 | 466..582 | 570 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib1 | 2167 | transib1 TRANSIB1 2167bp | 1900..1947 | 1563..1610 | 114 | 70.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19790960..19791305 | 1..346 | 100 | -> | Plus |
chr3L | 19791368..19791491 | 347..470 | 100 | -> | Plus |
chr3L | 19791543..19791651 | 471..579 | 100 | -> | Plus |
chr3L | 19791713..19792217 | 580..1084 | 100 | -> | Plus |
chr3L | 19792275..19792804 | 1085..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8533-RA | 66..1548 | 82..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RE | 459..1941 | 82..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RB | 66..1548 | 82..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8533-RA | 66..1548 | 82..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RB | 66..1548 | 82..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8533-RC | 1..1613 | 1..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RC | 1..1614 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RB | 229..1761 | 82..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8533-RC | 1..1613 | 1..1613 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ir76a-RB | 229..1761 | 82..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19801583..19801928 | 1..346 | 100 | -> | Plus |
3L | 19801991..19802114 | 347..470 | 100 | -> | Plus |
3L | 19802166..19802274 | 471..579 | 100 | -> | Plus |
3L | 19802336..19802840 | 580..1084 | 100 | -> | Plus |
3L | 19802898..19803427 | 1085..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19801583..19801928 | 1..346 | 100 | -> | Plus |
3L | 19801991..19802114 | 347..470 | 100 | -> | Plus |
3L | 19802166..19802274 | 471..579 | 100 | -> | Plus |
3L | 19802336..19802840 | 580..1084 | 100 | -> | Plus |
3L | 19802898..19803427 | 1085..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19801583..19801928 | 1..346 | 100 | -> | Plus |
3L | 19801991..19802114 | 347..470 | 100 | -> | Plus |
3L | 19802166..19802274 | 471..579 | 100 | -> | Plus |
3L | 19802336..19802840 | 580..1084 | 100 | -> | Plus |
3L | 19802898..19803427 | 1085..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19794683..19795028 | 1..346 | 100 | -> | Plus |
arm_3L | 19795091..19795214 | 347..470 | 100 | -> | Plus |
arm_3L | 19795266..19795374 | 471..579 | 100 | -> | Plus |
arm_3L | 19795436..19795940 | 580..1084 | 100 | -> | Plus |
arm_3L | 19795998..19796527 | 1085..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19794683..19795028 | 1..346 | 100 | -> | Plus |
3L | 19795091..19795214 | 347..470 | 100 | -> | Plus |
3L | 19795266..19795374 | 471..579 | 100 | -> | Plus |
3L | 19795436..19795940 | 580..1084 | 100 | -> | Plus |
3L | 19795998..19796527 | 1085..1614 | 100 | Plus |
Translation from 262 to 1563
> LD02552.hyp MSSKMRNLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTD IQLMLIFCELYNCTIQVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGV GGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISWTLLLRPFQFVLWM CVMLCLLLESLALGITRRWEHSSVAAGNSWISSLRFGCISTLKLFVNQST NYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRL FDHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQ MGFVVERLQFGHLGNTELIENDALKRLKLMVDDIYFAFTVAFVPRLWPHL NAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVK LGIDNFIGLILLWCFGMICSLLTFLGELWRGQG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ir76a-PE | 646 | CG42584-PE | 214..646 | 1..433 | 2306 | 100 | Plus |
Ir76a-PA | 515 | CG42584-PA | 83..515 | 1..433 | 2306 | 100 | Plus |
Ir76a-PB | 515 | CG8533-PB | 83..515 | 1..433 | 2306 | 100 | Plus |
Ir41a-PC | 648 | CG33492-PC | 202..636 | 2..428 | 936 | 42.3 | Plus |
Ir92a-PC | 678 | CG15685-PC | 237..669 | 3..428 | 402 | 25.6 | Plus |
Translation from 262 to 1563
> LD02552.pep MSSKMRNLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTD IQLMLIFCELYNCTIQVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGV GGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISWTLLLRPFQFVLWM CVMLCLLLESLALGITRRWEHSSVAAGNSWISSLRFGCISTLKLFVNQST NYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRL FDHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQ MGFVVERLQFGHLGNTELIENDALKRLKLMVDDIYFAFTVAFVPRLWPHL NAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVK LGIDNFIGLILLWCFGMICSLLTFLGELWRGQG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23592-PA | 414 | GF23592-PA | 1..406 | 24..429 | 1718 | 82.8 | Plus |
Dana\GF11024-PA | 327 | GF11024-PA | 2..300 | 83..377 | 668 | 42.3 | Plus |
Dana\GF23026-PA | 575 | GF23026-PA | 341..564 | 199..423 | 203 | 27.4 | Plus |
Dana\GF23026-PA | 575 | GF23026-PA | 210..341 | 3..132 | 185 | 28.7 | Plus |
Dana\GF21245-PA | 600 | GF21245-PA | 211..395 | 3..199 | 152 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16057-PA | 436 | GG16057-PA | 1..432 | 1..432 | 2170 | 95.8 | Plus |
Dere\GG23131-PA | 312 | GG23131-PA | 1..306 | 90..428 | 678 | 38.9 | Plus |
Dere\GG23878-PA | 639 | GG23878-PA | 242..576 | 3..332 | 294 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14655-PA | 456 | GH14655-PA | 19..451 | 1..429 | 1544 | 63 | Plus |
Dgri\GH20458-PA | 657 | GH20458-PA | 208..643 | 4..428 | 1016 | 42.9 | Plus |
Dgri\GH14149-PA | 610 | GH14149-PA | 243..373 | 3..131 | 200 | 30.8 | Plus |
Dgri\GH14149-PA | 610 | GH14149-PA | 380..599 | 205..428 | 168 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ir76a-PE | 646 | CG42584-PE | 214..646 | 1..433 | 2306 | 100 | Plus |
Ir76a-PA | 515 | CG42584-PA | 83..515 | 1..433 | 2306 | 100 | Plus |
Ir76a-PB | 515 | CG8533-PB | 83..515 | 1..433 | 2306 | 100 | Plus |
Ir41a-PC | 648 | CG33492-PC | 202..636 | 2..428 | 936 | 42.3 | Plus |
Ir92a-PC | 678 | CG15685-PC | 237..669 | 3..428 | 402 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11641-PA | 497 | GI11641-PA | 64..491 | 1..429 | 1575 | 66.3 | Plus |
Dmoj\GI18883-PA | 644 | GI18883-PA | 203..637 | 4..428 | 1009 | 42.2 | Plus |
Dmoj\GI22230-PA | 683 | GI22230-PA | 241..673 | 3..428 | 355 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15733-PA | 421 | GL15733-PA | 1..412 | 1..430 | 1677 | 73 | Plus |
Dper\GL11057-PA | 587 | GL11057-PA | 140..576 | 3..429 | 986 | 42.5 | Plus |
Dper\GL23463-PA | 697 | GL23463-PA | 256..687 | 3..427 | 352 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23782-PA | 437 | GA23782-PA | 1..427 | 1..429 | 1761 | 75.5 | Plus |
Dpse\GA24592-PA | 590 | GA24592-PA | 140..576 | 3..429 | 986 | 42.5 | Plus |
Dpse\GA13891-PB | 699 | GA13891-PB | 258..689 | 3..427 | 351 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19647-PA | 515 | GM19647-PA | 83..514 | 1..432 | 2258 | 97.2 | Plus |
Dsec\GM26714-PA | 361 | GM26714-PA | 2..351 | 83..428 | 768 | 43.2 | Plus |
Dsec\GM23108-PA | 640 | GM23108-PA | 243..577 | 3..332 | 317 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14827-PA | 515 | GD14827-PA | 83..514 | 1..432 | 2274 | 97.9 | Plus |
Dsim\GD15325-PA | 324 | GD15325-PA | 2..314 | 83..428 | 688 | 40.1 | Plus |
Dsim\GD19349-PA | 640 | GD19349-PA | 243..577 | 3..332 | 325 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11321-PA | 456 | GJ11321-PA | 19..449 | 1..429 | 1696 | 70.5 | Plus |
Dvir\GJ21918-PA | 655 | GJ21918-PA | 208..642 | 4..428 | 997 | 42.2 | Plus |
Dvir\GJ23033-PA | 673 | GJ23033-PA | 228..661 | 3..428 | 352 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17497-PA | 522 | GK17497-PA | 8..438 | 1..424 | 1633 | 68 | Plus |
Dwil\GK10759-PA | 514 | GK10759-PA | 65..501 | 3..428 | 983 | 43 | Plus |
Dwil\GK22446-PA | 719 | GK22446-PA | 272..708 | 3..429 | 343 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19623-PA | 451 | GE19623-PA | 19..450 | 1..432 | 2135 | 94 | Plus |
Dyak\GE15192-PA | 649 | GE15192-PA | 19..364 | 1..346 | 1662 | 93.1 | Plus |
Dyak\GE10986-PA | 319 | GE10986-PA | 2..314 | 83..428 | 681 | 39.3 | Plus |