BDGP Sequence Production Resources |
Search the DGRC for LD02616
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 26 |
Well: | 16 |
Vector: | pBS SK- |
Associated Gene/Transcript | Tango2-RA |
Protein status: | LD02616.pep: gold |
Preliminary Size: | 1548 |
Sequenced Size: | 1444 |
Gene | Date | Evidence |
---|---|---|
CG11176 | 2001-01-01 | Release 2 assignment |
CG11176 | 2001-11-02 | Blastp of sequenced clone |
CG11176 | 2003-01-01 | Sim4 clustering to Release 3 |
Tango2 | 2008-04-29 | Release 5.5 accounting |
Tango2 | 2008-08-15 | Release 5.9 accounting |
Tango2 | 2008-12-18 | 5.12 accounting |
1444 bp (1444 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069312
> LD02616.complete AGAAATCAAAACAAGGCAACCCGGTCATTGAAATTTCAGAAAATACTGCT TTGTTTGCGTTAACGGGAATGCTTTTTGCCCCGTAGATATGTATATATCA CATAGAGGCACGGCTCACAGAGAACACCCACCAATCCAAACCATTTACAT TTACCACTTAGATTAGCTGGTCTCGCAAACAACGGATAAGACTGTATATC AGCTGTACGTACGTACGGCTATTTGGTGATAAAACCGGCGCTATAGTTCC ACTGCCACAAAGTAACAAAGAGAAGACTGAGCCGAACAACCTGCCATTTT GATACCGACGCCCCACCGAGATTAAAGCCCACTTTTCCGGATCCCATTCG CAGTTGTCCCACAACCTCAAGGCACTACAAATCGCAACAATAGCCAAATA AGTATAGGATTCCGACGATGTGCGTGATATTCTTTTGTGCGGACTCGAAT CCGCAACCGGGTGGCTACAAGCTCATCCTGGCCTCCAATCGGGACGAGTT CTTTGCCCGCGCCACCCTATCGGCAGCCAAGTGGGCGAATGCCGATCATG TTTACGGAGGGATCGATCTGGAGCCGGGACGCGAGGGCGGCACCTGGCTG GCGATCGGCCACTCCGCTGGCTTCTTTAAGGTGGGCGCCCTGCTCAATCT GACCGGCGAGCCCAAGCCACGCGATGCAGTTGGGCGCGGCATGATTGTGG CGGACTATGTTACCCGGGCGGACGAGGAGCACAGCATCCTGAACTACAAC GAAAGGCTGCTCAAAGATTGCACCAAGTATTCTGCCTTCAACTTTGTGTC CATCGAAATTGGATCTGCATCCCAGCCCGCTCGCGTGAAGCTGCTGAGCA ATGTGCCGCCCACGCTGGAGGATTTCCAGAACGGCGAGTGCTACGGATTT GGCAACAGTCTGCCGCACTCTCCGTTCGAGAAGGTGCGTCATGGCAAACA GGAGTTCGAGGCGATCGTTAAGGCTCATGGGGAAGCCAGCGTGGAGACTC TGTCCGCCCAGCTGATGCAGTTGCTCCGCAACAAGCACAAATTCTGGCCG GACGACGAGCTAAAGACACGTGCGCCCAACTGGGGCGAGGGATTGAGTTC CCTAAACGTCCATATCGAAGAGCATGCCTATGGCAGCCGTACACACTCCG TTGTCCTGGTGGACAGCGAGAATAAGATGCACTTCATTGAGGAGACAATG ACTGGATTGGATCCGCACGGCGAATGGAACAAGACCCACATTGAAAAGGA TTTTCAAAACGGCGTTTGACCACGGACAGGATGACGCAACTTCTTGACGC AACTATCTCGTTCGAAGACTTTCCTCTTTTGTAGAATAACCTAATTGGCT AATATTCTACCAATCTGTATTTTGACTCTGGCATTTGCGATAATAAATAG TCATATTTACTATATCTTTAAAGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13509332..13509943 | 812..1423 | 3060 | 100 | Plus |
chrX | 22417052 | chrX | 13507753..13508312 | 1..560 | 2800 | 100 | Plus |
chrX | 22417052 | chrX | 13509008..13509138 | 682..812 | 655 | 100 | Plus |
chrX | 22417052 | chrX | 13508548..13508673 | 558..683 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 13618596..13619209 | 812..1425 | 3070 | 100 | Plus |
X | 23542271 | X | 13617017..13617576 | 1..560 | 2800 | 100 | Plus |
X | 23542271 | X | 13618272..13618402 | 682..812 | 655 | 100 | Plus |
X | 23542271 | X | 13617812..13617937 | 558..683 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 13626694..13627307 | 812..1425 | 3070 | 100 | Plus |
X | 23527363 | X | 13625115..13625674 | 1..560 | 2800 | 100 | Plus |
X | 23527363 | X | 13626370..13626500 | 682..812 | 655 | 100 | Plus |
X | 23527363 | X | 13625910..13626035 | 558..683 | 630 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13507753..13508311 | 1..559 | 100 | -> | Plus |
chrX | 13508550..13508672 | 560..682 | 100 | -> | Plus |
chrX | 13509009..13509138 | 683..812 | 100 | -> | Plus |
chrX | 13509333..13509943 | 813..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 1..852 | 418..1269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 1..852 | 418..1269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 1..852 | 418..1269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 1..852 | 418..1269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 1..852 | 418..1269 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 26..1448 | 1..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 26..1448 | 1..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 29..1451 | 1..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 26..1448 | 1..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tango2-RA | 29..1451 | 1..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13617017..13617575 | 1..559 | 100 | -> | Plus |
X | 13617814..13617936 | 560..682 | 100 | -> | Plus |
X | 13618273..13618402 | 683..812 | 100 | -> | Plus |
X | 13618597..13619207 | 813..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13617017..13617575 | 1..559 | 100 | -> | Plus |
X | 13617814..13617936 | 560..682 | 100 | -> | Plus |
X | 13618273..13618402 | 683..812 | 100 | -> | Plus |
X | 13618597..13619207 | 813..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13617017..13617575 | 1..559 | 100 | -> | Plus |
X | 13617814..13617936 | 560..682 | 100 | -> | Plus |
X | 13618273..13618402 | 683..812 | 100 | -> | Plus |
X | 13618597..13619207 | 813..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13511847..13511969 | 560..682 | 100 | -> | Plus |
arm_X | 13512306..13512435 | 683..812 | 100 | -> | Plus |
arm_X | 13511050..13511608 | 1..559 | 100 | -> | Plus |
arm_X | 13512630..13513240 | 813..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13625115..13625673 | 1..559 | 100 | -> | Plus |
X | 13625912..13626034 | 560..682 | 100 | -> | Plus |
X | 13626371..13626500 | 683..812 | 100 | -> | Plus |
X | 13626695..13627305 | 813..1423 | 100 | Plus |
Translation from 417 to 1268
> LD02616.hyp MCVIFFCADSNPQPGGYKLILASNRDEFFARATLSAAKWANADHVYGGID LEPGREGGTWLAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYVTR ADEEHSILNYNERLLKDCTKYSAFNFVSIEIGSASQPARVKLLSNVPPTL EDFQNGECYGFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVETLSAQLM QLLRNKHKFWPDDELKTRAPNWGEGLSSLNVHIEEHAYGSRTHSVVLVDS ENKMHFIEETMTGLDPHGEWNKTHIEKDFQNGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tango2-PC | 283 | CG11176-PC | 1..283 | 1..283 | 1515 | 100 | Plus |
Tango2-PA | 283 | CG11176-PA | 1..283 | 1..283 | 1515 | 100 | Plus |
Tango2-PD | 340 | CG11176-PD | 1..340 | 1..283 | 1389 | 81.2 | Plus |
Tango2-PB | 340 | CG11176-PB | 1..340 | 1..283 | 1389 | 81.2 | Plus |
Translation from 417 to 1268
> LD02616.pep MCVIFFCADSNPQPGGYKLILASNRDEFFARATLSAAKWANADHVYGGID LEPGREGGTWLAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYVTR ADEEHSILNYNERLLKDCTKYSAFNFVSIEIGSASQPARVKLLSNVPPTL EDFQNGECYGFGNSLPHSPFEKVRHGKQEFEAIVKAHGEASVETLSAQLM QLLRNKHKFWPDDELKTRAPNWGEGLSSLNVHIEEHAYGSRTHSVVLVDS ENKMHFIEETMTGLDPHGEWNKTHIEKDFQNGV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21807-PA | 349 | GF21807-PA | 152..346 | 88..282 | 861 | 79.5 | Plus |
Dana\GF21807-PA | 349 | GF21807-PA | 1..88 | 1..88 | 424 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17797-PA | 334 | GG17797-PA | 1..334 | 1..283 | 1358 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11912-PA | 282 | GH11912-PA | 1..277 | 1..277 | 1168 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tango2-PC | 283 | CG11176-PC | 1..283 | 1..283 | 1515 | 100 | Plus |
Tango2-PA | 283 | CG11176-PA | 1..283 | 1..283 | 1515 | 100 | Plus |
Tango2-PD | 340 | CG11176-PD | 1..340 | 1..283 | 1389 | 81.2 | Plus |
Tango2-PB | 340 | CG11176-PB | 1..340 | 1..283 | 1389 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15520-PA | 282 | GI15520-PA | 1..281 | 1..281 | 1145 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22571-PA | 329 | GL22571-PA | 1..306 | 1..261 | 973 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10818-PA | 326 | GA10818-PA | 1..303 | 1..261 | 974 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17622-PA | 326 | GM17622-PA | 1..326 | 1..283 | 1448 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19277-PA | 282 | GJ19277-PA | 1..281 | 1..281 | 1210 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10209-PA | 277 | GK10209-PA | 1..277 | 1..279 | 1102 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17093-PA | 330 | GE17093-PA | 1..330 | 1..283 | 1365 | 78.8 | Plus |