![]() | BDGP Sequence Production Resources |
Search the DGRC for LD02709
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 27 |
Well: | 9 |
Vector: | pBS SK- |
Associated Gene/Transcript | Map60-RA |
Protein status: | LD02709.pep: gold |
Preliminary Size: | 1858 |
Sequenced Size: | 1855 |
Gene | Date | Evidence |
---|---|---|
CG1825 | 2001-01-01 | Release 2 assignment |
CG1825 | 2001-11-02 | Blastp of sequenced clone |
CG1825 | 2003-01-01 | Sim4 clustering to Release 3 |
Map60 | 2008-04-29 | Release 5.5 accounting |
Map60 | 2008-08-15 | Release 5.9 accounting |
Map60 | 2008-12-18 | 5.12 accounting |
1855 bp (1855 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069313
> LD02709.complete CACATTTTCCGCCAATTTACCGACGCCAAATACAGAAGAAAAGAGAAGCG AACGGTGCGAAAGCGGAGAGAAAAACAAGCGGATCCTAGTTACATATACC AATTCGTGTGTCGCGTGTTATCAAAACAGCCTCCAAAATTATCAGGAACG CGCAACCAGCGGGCCGCAAGTCGCTGACTAAGATGGCAATCCAACTGGAC AAGATTCTGCAGGACATCGCCAAAGAAAAGGTGCTGCATCCAAACAATGG CGGCGCCAGCAAGCAGGAGCAGGAGGAGGCGTGGGCCAGGATCGGGCGTC TCAACAAGCTCTCTGTGCACGAATCGCGCTCCATCTTCATAGTGCTCCAA AAGAAGTACGAGCAGGAAAAGCTAAAGGGCAATTCGGCGTGGAAGCTCTT CAGTCTGATGCATCAGATCCATCAGGAGCCTAAAATCTCAATCAAGGAGG AGAATGATCAAGTACCCATGGAGGAGGTGGAGGAGTACGAAATGCTGGAG GTGCAGGAGCCTGAGGACGAGGATGACGCCCATCAGTACGGACAGCACAC CAACTCTACCGGCTCGGCGTCCTCCGACGGCGAAAGCCCCACAAAGTCAC ACAGCACCGGTTCGCCAGAAAAGGACGAGCGGTTGGCGTACGCCAAACCC AACGTCGACACTCCTCGCCCAGCCATCGAGGAGAAAAAGCTGCTCAACAC ACTGGCTAACAACACACCGCGAAGTAGCTCGCTGTCCGCCGCCGCAGCAG TACTGCAAAAGAAGGGAATTACTGTGAAGAAGACGCCCAGCTCCGCAGCA GCACCGAAACCGGCTATTGGGCAACAGGCGCCAGCCAGTGGGCAAAGATC AAGCTCCTCGCGCACCACCATTCAGCTGCCAGATTCTTTGAAGCGCAAAC TTTCGGAGGAGTACACCTCGTCATCGGCGCAAAAAAAGCAGACCAAGACC ACGAGCCCGAAACAAGCCGCTTCATCGGCAGCCGCAACTTCAGTGCACAC CAGCGTTCCAGATCAACTGCCGGCGGGAAACAATGTGGTGCACACAACCA CTGCCCAGCTGATGCAGGTTAAGAAGGAGCGTGAGGACAACCAGACACCA CCGCCGGGTATCAACATCATCACCATTCCATCGGCACAACAGATAAACGG TGGTGGTGGGGGAGCGAACTCATCGACAGCCGCCACCATTGCTTCCACCT CGGTGGCTTCCACAAACGGCTTTTCGCCACACATCGACGAGCTGGACTTT AAGAATGACATTATCTTCGGGCCGAAGATCAACGCCGCCTCCTCCAATAC ACCCGAGATTATCAACCTGGGCAACTTTGACAACTCGCTGCCGCCAACCT TTTTCAAGAATCTATGCAACTCGTCGCGACACGAGTCTCTCGGGCTGTAC GTGGCCAATGTGATGAACAGACTCTCTTCGCGTGCCTCCGCCAAGCTGGA GCTGTCCATCTTGCGCGCCATCCTCGATGTGCAGAGCGACGAACTGGAGC AGTAGACCGACTGATACTCGCAATTTAAATGATTACTCAGCTTACTTATT AGACAAACTAAAAAGGTAGTTATGTAGTAGGCCTGTCTGAACCATTTCTC GTATTTATCGTATTATTTTTTCCGTGTTCAAACGTCTGCGTTCTGTGCCG CCCACTTGTAAAATGTATTTACTCACAGTTCTGGTATGAGTGTTCATAGC ATTTACGCATGAATTTTAAAGCTAAATTTAAAATGTATTTCTAATATTTG AGATTTCGAATTTGTCCCTATTTAAGGTTGAATATGCTACTTGATTTTAA AATACGTTTATATGCAAATAAATCTACATAACTTAAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Map60-RA | 1938 | Map60-RA | 86..1920 | 1..1835 | 9175 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 968..1017 | 35..83 | 130 | 78.4 | Plus |
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 1226..1334 | 1760..1655 | 115 | 60.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5478342..5478795 | 1..454 | 100 | -> | Plus |
chr2R | 5478860..5480239 | 455..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1323 | 183..1505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1323 | 183..1505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1323 | 183..1505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1323 | 183..1505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1323 | 183..1505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 22..1855 | 1..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 22..1855 | 1..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1814 | 21..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 22..1855 | 1..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Map60-RA | 1..1814 | 21..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9590847..9591300 | 1..454 | 100 | -> | Plus |
2R | 9591365..9592744 | 455..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9590847..9591300 | 1..454 | 100 | -> | Plus |
2R | 9591365..9592744 | 455..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9590847..9591300 | 1..454 | 100 | -> | Plus |
2R | 9591365..9592744 | 455..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5478352..5478805 | 1..454 | 100 | -> | Plus |
arm_2R | 5478870..5480249 | 455..1834 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9592046..9592499 | 1..454 | 100 | -> | Plus |
2R | 9592564..9593943 | 455..1834 | 100 | Plus |
Translation from 182 to 1504
> LD02709.pep MAIQLDKILQDIAKEKVLHPNNGGASKQEQEEAWARIGRLNKLSVHESRS IFIVLQKKYEQEKLKGNSAWKLFSLMHQIHQEPKISIKEENDQVPMEEVE EYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDER LAYAKPNVDTPRPAIEEKKLLNTLANNTPRSSSLSAAAAVLQKKGITVKK TPSSAAAPKPAIGQQAPASGQRSSSSRTTIQLPDSLKRKLSEEYTSSSAQ KKQTKTTSPKQAASSAAATSVHTSVPDQLPAGNNVVHTTTAQLMQVKKER EDNQTPPPGINIITIPSAQQINGGGGGANSSTAATIASTSVASTNGFSPH IDELDFKNDIIFGPKINAASSNTPEIINLGNFDNSLPPTFFKNLCNSSRH ESLGLYVANVMNRLSSRASAKLELSILRAILDVQSDELEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12481-PA | 448 | GF12481-PA | 1..448 | 1..440 | 1656 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24091-PA | 441 | GG24091-PA | 1..441 | 1..440 | 2040 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22933-PA | 455 | GH22933-PA | 1..455 | 1..440 | 1404 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Map60-PA | 440 | CG1825-PA | 1..440 | 1..440 | 2216 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18419-PA | 465 | GI18419-PA | 1..465 | 1..440 | 1397 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17148-PA | 437 | GL17148-PA | 1..437 | 1..440 | 1610 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14854-PA | 437 | GA14854-PA | 1..437 | 1..440 | 1612 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21138-PA | 442 | GM21138-PA | 1..442 | 1..440 | 2255 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10668-PA | 442 | GD10668-PA | 1..442 | 1..440 | 2265 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21505-PA | 465 | GJ21505-PA | 1..465 | 1..440 | 1464 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15949-PA | 472 | GK15949-PA | 1..472 | 1..440 | 1274 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19291-PA | 441 | GE19291-PA | 1..441 | 1..440 | 2031 | 93.7 | Plus |
Translation from 182 to 1504
> LD02709.hyp MAIQLDKILQDIAKEKVLHPNNGGASKQEQEEAWARIGRLNKLSVHESRS IFIVLQKKYEQEKLKGNSAWKLFSLMHQIHQEPKISIKEENDQVPMEEVE EYEMLEVQEPEDEDDAHQYGQHTNSTGSASSDGESPTKSHSTGSPEKDER LAYAKPNVDTPRPAIEEKKLLNTLANNTPRSSSLSAAAAVLQKKGITVKK TPSSAAAPKPAIGQQAPASGQRSSSSRTTIQLPDSLKRKLSEEYTSSSAQ KKQTKTTSPKQAASSAAATSVHTSVPDQLPAGNNVVHTTTAQLMQVKKER EDNQTPPPGINIITIPSAQQINGGGGGANSSTAATIASTSVASTNGFSPH IDELDFKNDIIFGPKINAASSNTPEIINLGNFDNSLPPTFFKNLCNSSRH ESLGLYVANVMNRLSSRASAKLELSILRAILDVQSDELEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Map60-PA | 440 | CG1825-PA | 1..440 | 1..440 | 2216 | 100 | Plus |