Clone LD02947 Report

Search the DGRC for LD02947

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:29
Well:47
Vector:pBS SK-
Associated Gene/TranscriptGCC88-RA
Protein status:LD02947.pep: gold
Preliminary Size:2207
Sequenced Size:2320

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10703 2002-01-01 Sim4 clustering to Release 2
CG10703 2002-05-18 Blastp of sequenced clone
CG10703 2003-01-01 Sim4 clustering to Release 3
CG10703 2008-04-29 Release 5.5 accounting
CG10703 2008-08-15 Release 5.9 accounting
CG10703 2008-12-18 5.12 accounting

Clone Sequence Records

LD02947.complete Sequence

2320 bp (2320 high quality bases) assembled on 2002-05-18

GenBank Submission: AY118893

> LD02947.complete
CCCGCGTGCCAGCTGCTGAAATTTGTTAATTAAAAGAAATGCAAAAATGA
CACGGGAGATAAATAAATTGAACTACTAAGCGAACTGAAAGTAAATGAAC
TAATTCCCTTTCAAGGCGAAATGGAGAAGCGACAGAGGGAGCTGGAGGCG
CTGGTGTCCACCCAAAAGGAGCAACTGGGGCGCTATGAAAAGCGTCTAAA
AGACGTGGTCACTGCCTACAAGGGTCTGCTTAAGGAGAAGGAGGCATTGG
AGACGAGTCTGGCGGCGCATGCGGAGGCCACGGCGGTGGGCGAGTCCGGA
TCGCCGGCCAGGGAGTTGGAGTCCAAAAAAACCAGCACCGACTCTGCGGA
TGGAGCAACCGAGGGCGCTGCACCGGGTCCGCCTGCTCCCCCGGCCGAGG
GTCAACTGCAGACCCAAATTATCACCCTGATGAACTCGCTGGCCACTCTT
TCCGCTGAGAAATCCCGCATGGAGGCCTCCTTTCAGGCGGATAAAAAGCA
ACTGCGCAGCCAAATCGCCCAAAAGGAGCAGACCATTCAGGAGCTTAATA
CCCGGGCCAAGGAGCAGGCTGCTCGGGCCAAAAGCGACGTGGACGAGATC
AAGGCCAAGTGGATCGTGGAGCGACAGGAGCGCGAGAAAGAGACCAACAA
CCAAATGCTCATGATCCGCGAACTGCAGAAACTCTATGCGGACGAGCGGC
ATCTAAAGGACAACATTGAGATGCAGTTAAACAACTTCAAGACCCAGTTC
GCCAGCAACGAGGCAGAGAATAGCCGGCTACGGGAATTGCAATCCCAGCT
AAAGGAGGCTCGCTCCCAGCTGAAACAGTTCCAGGCCAAGACCGAGCACT
CTGCAGCAGCGTCAGCGAGTGCGGACAGCGCCGCTCTCCTTCAGCAAGTG
CGCCTTGAGATGCAGCAACTGAAGGAGCAGCATGCAGTGGCCATTCGTCA
GGAACAGCGTCGCGTGCTGCGTGCCGAGGAACAGAGTCGCAGGCAGGCGG
CGCTGCACGAGGATCGCGTGGCCAGTCTAGAGGCACGCCTGGCGGAGCTC
AGCACCACTGTCGGCAGCTACGACCGCCTGCGTCAGCAAGATCAGGACAG
CATCCATGATTTGAAGCAGCAGCTGCAGGATCTAGAGCAGGCACATGTGC
GTCCAACATCCAATTCAAGGGCGCTAAACGAAGATGTGGACGTAGCCACG
CTGGTTGACGAGATGGTGCGCTTGAAGAAACTGCTTACCACAGCCAATGC
CCGTTCTGCCAATCCACTGGATCTCGGGGAGATCCTATCATTTAGCGGCC
AAACAGCTACCCGAGTCGAGAGTCACGCCCACTGCGAGCAACAGCTTCAG
GGTGTGCAGCAAATGCTCGAGGCATCCAAGCAGCAGCGACAGCTACTCGA
ACAGAAGGTGCAGCTGCAGCACTCGCACATCCAAACGCTGCAGGAGAAGG
TGCAGGTGCTCAATCGCAACATCGACGAGGCGGAAGTCGAACTAAAGCAG
CAGGGCGAAAAGCTGCGCCTGGCATTGAAGAACGAACGAACCAAGTGGCA
GGAAGCCAAGGCTGAACTGGAGAACGAGACGCGCTGCAAACTGAACGAGC
TGGAACAGCTACTGCAGAAGCAGCGCCAGAGGTCACTGCAGCTGCTGGAT
GAGAAGGAGCAGGAGATTAAGACACTGCAGACCTCCTTCGAGGTCTTTCA
CTCGGCCAGCGGTGTGGGCAGCACACTGGCCACACCCACACTTGAAGCAG
CTGCCGATTCCTTTCACTATTCCTCCGACACCGACAGCGTGGAGGGGGAG
CAGCGGGAAAGAAAGCTAAAGGTGCGCTCCAAGAAAATGTCGATGGGCGA
GAACTGCCACATGCTGCACTATGCCAACGAGTTGGCGCGCAAGGACATCG
AAATCACGACACTGCGGAAAGCCAAATACGCCGCCGAGTCGACGCTGCGA
AAGGCGATCCAGGACAAGGTGACATCTCAGCAGGAAATGCACGAGAAGAT
CGAGTGCCTCAAGGAGCAGGTGGACAGACTCGAACGTTGCAAGACGCGCG
AGGGTGCCAATCTGGAGTACCTGAAGAACGTTATTATCAGCTACATTGTT
ACCCGGGACGCGGACGGCAAGCGTCACATGCTGAACGCCATCTCGGCGGT
GCTCCAGTTCACCGCCGCAGAGATGCAGGCGATCAATGCATCATTCCAGA
AGAAATAACATTCGTACTTTTGTTCAACAATCATGTGCAACATATTTAAA
ACCCTACAAACAGATCCTAAATAGATAACTAACTAAATCCGAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

LD02947.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG10703-RA 2349 CG10703-RA 20..2311 1..2292 11460 100 Plus
CG17726-RA 1486 CG17726-RA 1416..1486 2292..2222 355 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7054074..7055900 2027..201 9030 99.6 Minus
chr3R 27901430 chr3R 7053751..7054016 2291..2026 1330 100 Minus
chr3R 27901430 chr3R 7055952..7056153 202..1 1010 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:49:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11228490..11230316 2027..201 9135 100 Minus
3R 32079331 3R 11228157..11228423 2292..2026 1335 100 Minus
3R 32079331 3R 11230368..11230569 202..1 1010 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10969321..10971147 2027..201 9135 100 Minus
3R 31820162 3R 10968988..10969254 2292..2026 1335 100 Minus
3R 31820162 3R 10971199..10971400 202..1 1010 100 Minus
Blast to na_te.dros performed 2019-03-16 05:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 4409..4513 1442..1547 139 63.9 Plus
roo 9092 roo DM_ROO 9092bp 1065..1141 1589..1665 133 63.6 Plus

LD02947.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:34:15 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7053751..7054014 2028..2291 100 <- Minus
chr3R 7054074..7055898 203..2027 99 <- Minus
chr3R 7055952..7056153 1..202 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:31:31 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2088 121..2208 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:44:55 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2088 121..2208 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:36:50 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2088 121..2208 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:37:06 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2088 121..2208 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:05:23 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
GCC88-RA 1..2088 121..2208 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:20:05 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2207 2..2208 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:44:54 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2291 1..2291 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:50 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 32..2322 1..2291 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:37:06 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
CG10703-RA 1..2207 2..2208 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:05:23 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
GCC88-RA 32..2322 1..2291 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:34:15 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11230368..11230569 1..202 100   Minus
3R 11228158..11228421 2028..2291 100 <- Minus
3R 11228490..11230314 203..2027 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:34:15 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11230368..11230569 1..202 100   Minus
3R 11228158..11228421 2028..2291 100 <- Minus
3R 11228490..11230314 203..2027 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:34:15 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11230368..11230569 1..202 100   Minus
3R 11228158..11228421 2028..2291 100 <- Minus
3R 11228490..11230314 203..2027 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:50 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7053880..7054143 2028..2291 100 <- Minus
arm_3R 7054212..7056036 203..2027 100 <- Minus
arm_3R 7056090..7056291 1..202 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:09:30 Download gff for LD02947.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10968989..10969252 2028..2291 100 <- Minus
3R 10969321..10971145 203..2027 100 <- Minus
3R 10971199..10971400 1..202 100   Minus

LD02947.pep Sequence

Translation from 120 to 2207

> LD02947.pep
MEKRQRELEALVSTQKEQLGRYEKRLKDVVTAYKGLLKEKEALETSLAAH
AEATAVGESGSPARELESKKTSTDSADGATEGAAPGPPAPPAEGQLQTQI
ITLMNSLATLSAEKSRMEASFQADKKQLRSQIAQKEQTIQELNTRAKEQA
ARAKSDVDEIKAKWIVERQEREKETNNQMLMIRELQKLYADERHLKDNIE
MQLNNFKTQFASNEAENSRLRELQSQLKEARSQLKQFQAKTEHSAAASAS
ADSAALLQQVRLEMQQLKEQHAVAIRQEQRRVLRAEEQSRRQAALHEDRV
ASLEARLAELSTTVGSYDRLRQQDQDSIHDLKQQLQDLEQAHVRPTSNSR
ALNEDVDVATLVDEMVRLKKLLTTANARSANPLDLGEILSFSGQTATRVE
SHAHCEQQLQGVQQMLEASKQQRQLLEQKVQLQHSHIQTLQEKVQVLNRN
IDEAEVELKQQGEKLRLALKNERTKWQEAKAELENETRCKLNELEQLLQK
QRQRSLQLLDEKEQEIKTLQTSFEVFHSASGVGSTLATPTLEAAADSFHY
SSDTDSVEGEQRERKLKVRSKKMSMGENCHMLHYANELARKDIEITTLRK
AKYAAESTLRKAIQDKVTSQQEMHEKIECLKEQVDRLERCKTREGANLEY
LKNVIISYIVTRDADGKRHMLNAISAVLQFTAAEMQAINASFQKK*

LD02947.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18252-PA 692 GF18252-PA 1..692 1..695 2981 84.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:36:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17233-PA 696 GG17233-PA 1..696 1..695 3294 95.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:36:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17350-PA 681 GH17350-PA 1..681 1..695 2509 74.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
GCC88-PA 695 CG10703-PA 1..695 1..695 3417 100 Plus
CLIP-190-PN 1598 CG5020-PN 671..1347 2..648 238 20.3 Plus
CLIP-190-PR 1601 CG5020-PR 674..1350 2..648 238 20.3 Plus
CLIP-190-PP 1623 CG5020-PP 696..1372 2..648 238 20.3 Plus
CLIP-190-PC 1652 CG5020-PC 725..1401 2..648 238 20.3 Plus
CLIP-190-PS 1653 CG5020-PS 726..1402 2..648 238 20.3 Plus
CLIP-190-PM 1668 CG5020-PM 741..1417 2..648 238 20.3 Plus
CLIP-190-PB 1689 CG5020-PB 762..1438 2..648 238 20.3 Plus
CLIP-190-PA 1690 CG5020-PA 763..1439 2..648 238 20.3 Plus
CLIP-190-PR 1601 CG5020-PR 262..839 101..691 232 21.3 Plus
CLIP-190-PM 1668 CG5020-PM 308..906 101..691 226 21.1 Plus
CLIP-190-PB 1689 CG5020-PB 329..927 101..691 226 21.1 Plus
lva-PD 2779 CG6450-PD 885..1465 5..644 225 21.8 Plus
lva-PC 2779 CG6450-PC 885..1465 5..644 225 21.8 Plus
CLIP-190-PN 1598 CG5020-PN 237..836 101..691 224 21.1 Plus
CLIP-190-PP 1623 CG5020-PP 262..861 101..691 224 21.1 Plus
CLIP-190-PC 1652 CG5020-PC 291..890 101..691 224 21.1 Plus
CLIP-190-PA 1690 CG5020-PA 329..928 101..691 224 21.1 Plus
zip-PH 1964 CG15792-PH 926..1580 1..653 221 20.7 Plus
zip-PG 1971 CG15792-PG 918..1572 1..653 221 20.7 Plus
zip-PE 1971 CG15792-PE 918..1572 1..653 221 20.7 Plus
zip-PC 1971 CG15792-PC 918..1572 1..653 221 20.7 Plus
zip-PF 1979 CG15792-PF 926..1580 1..653 221 20.7 Plus
zip-PB 2011 CG15792-PB 958..1612 1..653 221 20.7 Plus
zip-PD 2016 CG15792-PD 963..1617 1..653 221 20.7 Plus
zip-PI 2024 CG15792-PI 971..1625 1..653 221 20.7 Plus
zip-PA 2056 CG15792-PA 1003..1657 1..653 221 20.7 Plus
asl-PA 994 CG2919-PA 23..706 4..643 206 21.8 Plus
GCC185-PB 1135 CG3532-PB 419..1101 94..689 202 19.9 Plus
Mhc-PL 1936 CG17927-PL 1381..1882 4..524 201 22.2 Plus
Mhc-PM 1936 CG17927-PM 1381..1882 4..524 201 22.2 Plus
Mhc-PK 1936 CG17927-PK 1381..1882 4..524 201 22.2 Plus
Mhc-PU 1949 CG17927-PU 1381..1882 4..524 201 22.2 Plus
Mhc-PN 1949 CG17927-PN 1381..1882 4..524 201 22.2 Plus
Mhc-PP 1949 CG17927-PP 1381..1882 4..524 201 22.2 Plus
Mhc-PV 1962 CG17927-PV 1381..1882 4..524 201 22.2 Plus
Mhc-PE 1962 CG17927-PE 1381..1882 4..524 201 22.2 Plus
Mhc-PS 1962 CG17927-PS 1381..1882 4..524 201 22.2 Plus
Mhc-PH 1962 CG17927-PH 1381..1882 4..524 201 22.2 Plus
Mhc-PT 1962 CG17927-PT 1381..1882 4..524 201 22.2 Plus
Mhc-PO 1962 CG17927-PO 1381..1882 4..524 201 22.2 Plus
Mhc-PF 1962 CG17927-PF 1381..1882 4..524 201 22.2 Plus
Mhc-PQ 1962 CG17927-PQ 1381..1882 4..524 201 22.2 Plus
Mhc-PB 1962 CG17927-PB 1381..1882 4..524 201 22.2 Plus
Mhc-PI 1962 CG17927-PI 1381..1882 4..524 201 22.2 Plus
Mhc-PG 1962 CG17927-PG 1381..1882 4..524 201 22.2 Plus
Mhc-PA 1962 CG17927-PA 1381..1882 4..524 201 22.2 Plus
Mhc-PD 1962 CG17927-PD 1381..1882 4..524 201 22.2 Plus
Mhc-PC 1962 CG17927-PC 1381..1882 4..524 201 22.2 Plus
Mhc-PR 1962 CG17927-PR 1381..1882 4..524 201 22.2 Plus
brp-PK 1707 CG42344-PK 316..872 97..644 199 21.4 Plus
lva-PD 2779 CG6450-PD 1824..2459 1..633 198 21.1 Plus
lva-PC 2779 CG6450-PC 1824..2459 1..633 198 21.1 Plus
CLIP-190-PS 1653 CG5020-PS 329..891 101..691 195 21.2 Plus
brp-PI 1397 CG42344-PI 24..562 107..644 194 21.3 Plus
brp-PL 1781 CG42344-PL 316..874 97..636 192 20 Plus
brp-PH 1740 CG42344-PH 270..833 97..636 191 20.3 Plus
brp-PE 1740 CG42344-PE 270..833 97..636 191 20.3 Plus
brp-PD 1740 CG42344-PD 270..833 97..636 191 20.3 Plus
brp-PG 1786 CG42344-PG 316..879 97..636 191 20.3 Plus
zip-PH 1964 CG15792-PH 1324..1933 14..643 190 20.6 Plus
zip-PG 1971 CG15792-PG 1316..1925 14..643 190 20.6 Plus
zip-PE 1971 CG15792-PE 1316..1925 14..643 190 20.6 Plus
zip-PC 1971 CG15792-PC 1316..1925 14..643 190 20.6 Plus
zip-PF 1979 CG15792-PF 1324..1933 14..643 190 20.6 Plus
zip-PB 2011 CG15792-PB 1356..1965 14..643 190 20.6 Plus
zip-PD 2016 CG15792-PD 1361..1970 14..643 190 20.6 Plus
zip-PI 2024 CG15792-PI 1369..1978 14..643 190 20.6 Plus
zip-PA 2056 CG15792-PA 1401..2010 14..643 190 20.6 Plus
lva-PD 2779 CG6450-PD 1098..1472 133..523 188 22.6 Plus
lva-PC 2779 CG6450-PC 1098..1472 133..523 188 22.6 Plus
alt-PH 842 CG18212-PH 324..835 8..520 188 21.2 Plus
CLIP-190-PN 1598 CG5020-PN 906..1506 9..638 185 20.4 Plus
CLIP-190-PR 1601 CG5020-PR 909..1509 9..638 185 20.4 Plus
CLIP-190-PP 1623 CG5020-PP 931..1531 9..638 185 20.4 Plus
CLIP-190-PC 1652 CG5020-PC 960..1560 9..638 185 20.4 Plus
CLIP-190-PS 1653 CG5020-PS 961..1561 9..638 185 20.4 Plus
CLIP-190-PM 1668 CG5020-PM 976..1576 9..638 185 20.4 Plus
CLIP-190-PB 1689 CG5020-PB 997..1597 9..638 185 20.4 Plus
CLIP-190-PA 1690 CG5020-PA 998..1598 9..638 185 20.4 Plus
zip-PH 1964 CG15792-PH 1481..1944 2..513 181 22.3 Plus
Mhc-PL 1936 CG17927-PL 1068..1707 1..647 181 21.9 Plus
Mhc-PM 1936 CG17927-PM 1068..1707 1..647 181 21.9 Plus
Mhc-PK 1936 CG17927-PK 1068..1707 1..647 181 21.9 Plus
Mhc-PU 1949 CG17927-PU 1068..1707 1..647 181 21 Plus
Mhc-PN 1949 CG17927-PN 1068..1707 1..647 181 21 Plus
Mhc-PP 1949 CG17927-PP 1068..1707 1..647 181 21.9 Plus
Mhc-PV 1962 CG17927-PV 1068..1707 1..647 181 21.9 Plus
Mhc-PE 1962 CG17927-PE 1068..1707 1..647 181 21 Plus
Mhc-PS 1962 CG17927-PS 1068..1707 1..647 181 21.9 Plus
Mhc-PH 1962 CG17927-PH 1068..1707 1..647 181 21 Plus
Mhc-PT 1962 CG17927-PT 1068..1707 1..647 181 21 Plus
Mhc-PO 1962 CG17927-PO 1068..1707 1..647 181 21 Plus
Mhc-PF 1962 CG17927-PF 1068..1707 1..647 181 21 Plus
Mhc-PQ 1962 CG17927-PQ 1068..1707 1..647 181 21 Plus
Mhc-PB 1962 CG17927-PB 1068..1707 1..647 181 21.9 Plus
Mhc-PI 1962 CG17927-PI 1068..1707 1..647 181 21 Plus
Mhc-PG 1962 CG17927-PG 1068..1707 1..647 181 21 Plus
Mhc-PA 1962 CG17927-PA 1068..1707 1..647 181 21 Plus
Mhc-PD 1962 CG17927-PD 1068..1707 1..647 181 21 Plus
Mhc-PC 1962 CG17927-PC 1068..1707 1..647 181 21 Plus
Mhc-PR 1962 CG17927-PR 1068..1707 1..647 181 21 Plus
lva-PD 2779 CG6450-PD 1164..1683 6..500 177 21.5 Plus
lva-PC 2779 CG6450-PC 1164..1683 6..500 177 21.5 Plus
zip-PG 1971 CG15792-PG 1473..1928 2..503 177 22.3 Plus
zip-PE 1971 CG15792-PE 1473..1928 2..503 177 22.3 Plus
zip-PC 1971 CG15792-PC 1473..1928 2..503 177 22.3 Plus
zip-PF 1979 CG15792-PF 1481..1936 2..503 177 22.3 Plus
zip-PB 2011 CG15792-PB 1513..1968 2..503 177 22.3 Plus
zip-PD 2016 CG15792-PD 1518..1973 2..503 177 22.3 Plus
zip-PI 2024 CG15792-PI 1526..1981 2..503 177 22.3 Plus
zip-PA 2056 CG15792-PA 1558..2013 2..503 177 22.3 Plus
brp-PK 1707 CG42344-PK 1223..1694 1..461 169 18.3 Plus
brp-PI 1397 CG42344-PI 913..1384 1..461 169 18.3 Plus
brp-PL 1781 CG42344-PL 1297..1768 1..461 169 18.3 Plus
brp-PH 1740 CG42344-PH 1256..1727 1..461 169 18.3 Plus
brp-PE 1740 CG42344-PE 1256..1727 1..461 169 18.3 Plus
brp-PD 1740 CG42344-PD 1256..1727 1..461 169 18.3 Plus
brp-PG 1786 CG42344-PG 1302..1773 1..461 169 18.3 Plus
Mhc-PU 1949 CG17927-PU 1064..1584 106..647 168 20.8 Plus
Mhc-PN 1949 CG17927-PN 1064..1584 106..647 168 20.8 Plus
Mhc-PE 1962 CG17927-PE 1064..1584 106..647 168 20.8 Plus
Mhc-PH 1962 CG17927-PH 1064..1584 106..647 168 20.8 Plus
Mhc-PT 1962 CG17927-PT 1064..1584 106..647 168 20.8 Plus
Mhc-PO 1962 CG17927-PO 1064..1584 106..647 168 20.8 Plus
Mhc-PF 1962 CG17927-PF 1064..1584 106..647 168 20.8 Plus
Mhc-PQ 1962 CG17927-PQ 1064..1584 106..647 168 20.8 Plus
Mhc-PI 1962 CG17927-PI 1064..1584 106..647 168 20.8 Plus
Mhc-PG 1962 CG17927-PG 1064..1584 106..647 168 20.8 Plus
Mhc-PA 1962 CG17927-PA 1064..1584 106..647 168 20.8 Plus
Mhc-PD 1962 CG17927-PD 1064..1584 106..647 168 20.8 Plus
Mhc-PC 1962 CG17927-PC 1064..1584 106..647 168 20.8 Plus
Mhc-PR 1962 CG17927-PR 1064..1584 106..647 168 20.8 Plus
brp-PK 1707 CG42344-PK 1393..1697 1..327 168 21.9 Plus
brp-PI 1397 CG42344-PI 1083..1387 1..327 168 21.9 Plus
brp-PL 1781 CG42344-PL 1467..1771 1..327 168 21.9 Plus
brp-PH 1740 CG42344-PH 1426..1730 1..327 168 21.9 Plus
brp-PE 1740 CG42344-PE 1426..1730 1..327 168 21.9 Plus
brp-PD 1740 CG42344-PD 1426..1730 1..327 168 21.9 Plus
brp-PG 1786 CG42344-PG 1472..1776 1..327 168 21.9 Plus
brp-PH 1740 CG42344-PH 143..681 104..652 167 18.2 Plus
brp-PE 1740 CG42344-PE 143..681 104..652 167 18.2 Plus
brp-PD 1740 CG42344-PD 143..681 104..652 167 18.2 Plus
brp-PG 1786 CG42344-PG 189..727 104..652 167 18.2 Plus
lva-PD 2779 CG6450-PD 1188..1669 106..637 166 19.7 Plus
lva-PC 2779 CG6450-PC 1188..1669 106..637 166 19.7 Plus
brp-PK 1707 CG42344-PK 189..711 104..652 166 19.9 Plus
Mhc-PL 1936 CG17927-PL 1064..1584 106..647 164 21.2 Plus
Mhc-PM 1936 CG17927-PM 1064..1584 106..647 164 21.2 Plus
Mhc-PK 1936 CG17927-PK 1064..1584 106..647 164 21.2 Plus
Mhc-PP 1949 CG17927-PP 1064..1584 106..647 164 21.2 Plus
Mhc-PV 1962 CG17927-PV 1064..1584 106..647 164 21.2 Plus
Mhc-PS 1962 CG17927-PS 1064..1584 106..647 164 21.2 Plus
Mhc-PB 1962 CG17927-PB 1064..1584 106..647 164 21.2 Plus
brp-PL 1781 CG42344-PL 189..722 104..652 163 19.4 Plus
brp-PK 1707 CG42344-PK 645..1288 24..695 162 19.2 Plus
brp-PI 1397 CG42344-PI 335..978 24..695 162 19.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23889-PA 692 GI23889-PA 1..692 1..695 2583 75.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:36:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12027-PA 697 GL12027-PA 1..697 1..695 2870 82.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:36:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10509-PA 697 GA10509-PA 1..697 1..695 2869 82.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:36:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26113-PA 695 GM26113-PA 1..695 1..695 3571 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18743-PA 695 GD18743-PA 1..695 1..695 3571 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:36:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23981-PA 692 GJ23981-PA 1..692 1..695 2635 78.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:36:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14307-PA 698 GK14307-PA 1..698 1..695 2503 73.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:36:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24635-PA 695 GE24635-PA 1..695 1..695 3358 96.1 Plus

LD02947.hyp Sequence

Translation from 120 to 2207

> LD02947.hyp
MEKRQRELEALVSTQKEQLGRYEKRLKDVVTAYKGLLKEKEALETSLAAH
AEATAVGESGSPARELESKKTSTDSADGATEGAAPGPPAPPAEGQLQTQI
ITLMNSLATLSAEKSRMEASFQADKKQLRSQIAQKEQTIQELNTRAKEQA
ARAKSDVDEIKAKWIVERQEREKETNNQMLMIRELQKLYADERHLKDNIE
MQLNNFKTQFASNEAENSRLRELQSQLKEARSQLKQFQAKTEHSAAASAS
ADSAALLQQVRLEMQQLKEQHAVAIRQEQRRVLRAEEQSRRQAALHEDRV
ASLEARLAELSTTVGSYDRLRQQDQDSIHDLKQQLQDLEQAHVRPTSNSR
ALNEDVDVATLVDEMVRLKKLLTTANARSANPLDLGEILSFSGQTATRVE
SHAHCEQQLQGVQQMLEASKQQRQLLEQKVQLQHSHIQTLQEKVQVLNRN
IDEAEVELKQQGEKLRLALKNERTKWQEAKAELENETRCKLNELEQLLQK
QRQRSLQLLDEKEQEIKTLQTSFEVFHSASGVGSTLATPTLEAAADSFHY
SSDTDSVEGEQRERKLKVRSKKMSMGENCHMLHYANELARKDIEITTLRK
AKYAAESTLRKAIQDKVTSQQEMHEKIECLKEQVDRLERCKTREGANLEY
LKNVIISYIVTRDADGKRHMLNAISAVLQFTAAEMQAINASFQKK*

LD02947.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
GCC88-PA 695 CG10703-PA 1..695 1..695 3417 100 Plus
CLIP-190-PN 1598 CG5020-PN 671..1347 2..648 238 20.3 Plus
CLIP-190-PR 1601 CG5020-PR 674..1350 2..648 238 20.3 Plus
CLIP-190-PP 1623 CG5020-PP 696..1372 2..648 238 20.3 Plus
CLIP-190-PC 1652 CG5020-PC 725..1401 2..648 238 20.3 Plus
CLIP-190-PR 1601 CG5020-PR 262..839 101..691 232 21.3 Plus
CLIP-190-PN 1598 CG5020-PN 237..836 101..691 224 21.1 Plus
CLIP-190-PP 1623 CG5020-PP 262..861 101..691 224 21.1 Plus
CLIP-190-PN 1598 CG5020-PN 906..1506 9..638 185 20.4 Plus
CLIP-190-PR 1601 CG5020-PR 909..1509 9..638 185 20.4 Plus
CLIP-190-PP 1623 CG5020-PP 931..1531 9..638 185 20.4 Plus