BDGP Sequence Production Resources |
Search the DGRC for LD02975
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 29 |
Well: | 75 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG9281-RB |
Protein status: | LD02975.pep: gold |
Preliminary Size: | 2425 |
Sequenced Size: | 2585 |
Gene | Date | Evidence |
---|---|---|
CG9281 | 2001-10-10 | Blastp of sequenced clone |
CG9281 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9281 | 2008-04-29 | Release 5.5 accounting |
CG9281 | 2008-08-15 | Release 5.9 accounting |
CG9281 | 2008-12-18 | 5.12 accounting |
2585 bp (2585 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061059
> LD02975.complete TTCAGTCGTCTCTCTCTTTTTCTACCGAAAACGGTAACAGGCAGCAGGCA CTTTTCAGCAGCTGCTCCGTGCGTGCGTGTGTGTGTGCGAGATCCGAACC GAACCGATCTGTTCCGTTACGTTCCGTTACCGTAGACGTCGCCGTACCGT TATCCTTCGCGAACTTCAAAGGACACTCCTTTGCACTGCTCTCGCCCATC ATCCTTGATTGTCAGTCAAGTCCAATCGACGCCAAGCCGGAATAATGTCA TCCGCCGCGAAGAAACGGGAGGCGCAGAAGAAGAAGGATGCGCGCAACAA GAAGATCCAACAGATACCCTCCACCAAGAAGGCCAATGGTGTCCCGGAAC GCGAACTGACCGAGGAGGAGAAGCTGTGCGCCAAGCTGGAGGAGGAGGCC CGGATCAGTGCGGAGGCCCGATCCTGCACCGGATCGCTGGCGGTGCATCC GCGTTCCCGTGACGTCAAGATCGCCAACTTTTCGATCACGTTCTTTGGCT CCGAGCTGCTGCAGGACACCATGCTGGAGTTGAATTGCGGGCGTCGCTAC GGTCTGATTGGCCTGAACGGATGCGGTAAGTCCTCGCTGCTGGCCGTGCT TGGCGGCAGGGAGGTGCCGGTACCGCCGCACATCGACATCTTCCACTTGA CGCGCGAAATCCCGGCCAGTTCAAAGAGTGCGCTGCAGTGCGTCATGGAG GTGGATGAGGAGCGCATTAAGCTAGAGAAGCTGGCCGAAGAGCTGGCCAT GAGCGAGGAAGATGATGCTCAGGAGCAGCTGATCGACATCTACGAGCGGC TGGACGATATGTCCGCCGATCTGGCAGAGGTCAAGGCGGCCCGCATCCTT CACGGTCTTGGCTTCGACAAGGCCATGCAACAGAAACAGGCCAAGGACTT CTCAGGTGGTTGGCGTATGCGTATCGCCTTGGCCCGCGCGCTGTTTGTGA AGCCCCATCTGCTGTTGCTGGACGAGCCGACGAATCACTTGGATTTGGAC GCCTGTGTGTGGCTGGAGGAGGAGCTTAAGACATACAAGCGAATCCTGGT GCTCATCTCGCACTCGCAGGATTTCCTCAACGGTGTCTGCACAAACATCA TTCACCTGACGGGCAAGCGACTCAAGTACTATACGGGTAACTATGAGGCC TTTGTGCGCACACGCATGGAACTGCTGGAAAACCAGATGAAGCAGTACAA CTGGGAACAGGACCAGATTTCGCACATGAAGAACTACATTGCTCGATTCG GTCACGGTTCCGCCAAGTTGGCGCGACAGGCGCAGTCCAAGGAGAAGACG CTGGCCAAGATGGTTGCTCAGGGACTCACAGAGAAGGTGTCCGACGATAA GGTGCTCAACTTTTACTTCCCATCGTGCGGCAAGGTGCCGCCACCCGTGA TTATGGTTCAGAACGTGAATTTCCGATACAACGATGAGACACCGTGGATC TACAAAAATCTGGAGTTCGGAATTGATCTAGACACACGTCTCGCTTTGGT TGGACCCAACGGAGCTGGCAAGTCCACGTTGCTGAAGCTGCTTTATGGCG ATCTGGTGCCCACCTCCGGCATGATCCGCAAGAACTCCCATCTGCGCATC GCCCGCTACCACCAGCATCTGCACGAGCTGCTCGATTTGGATGCCAGTCC GCTAGAGTACATGATGCGTGCCTTCCCTGACGTCAAGGAGAAGGAGGAGA TGCGCAAGATTATTGGTCGCTACGGCCTCACTGGTCGCCAGCAGGTGTGT CCGATTCGCCAGCTCTCCGATGGCCAGCGGTGCCGCGTGGTGTTCGCCTG GCTCGCCTGGCAGGTGCCCCATCTTCTGCTACTTGACGAACCCACCAATC ACTTGGACATGGAGACAATCGATGCGCTCGCGGATGCGATCAACGATTTC GATGGCGGCATGGTGCTAGTTAGTCACGATTTCCGTCTGATTAATCAGGT GGCTGAGGAGATTTGGGTATGCGAAAAGGAGACGGTAACCAAGTGGAAGG GCGGCATTCTGGACTACAAGGATCATCTGAAGAACAAGATCACCTCCGAG AACGAGAAGAAGGCCAAGGCGGGAAAGTAGATATATCCCATATCCAGTGG ATAGATAGCTGCCAACGGCCACACACTCGCACACACACAGTCGCGCATCC AAAACACCCAAACACACAACCAAACGCATCCCTCAACCGAAAGGACATTC AGACCGCTATCCCTTCTCTTCAATAGGCGGCGGGCGACATCCGGCTATTG GGCTGCCCGTTCGCTGCAATCCATTCTGTGCGAAATTAGTTTTGCGTTTA CTCTACGCTATAGTGAAGTCGCAATTCGATCGGCCAACCAGTAAAATAAT CAACAATAAAACTAGAACGAACCGAACACCCAATCCAAACCTATCCAATC ACAACCATGCGTAACACAACCGTTGACAACTCAACAGGAACACACAAATT TTAGCTGAATTTTTTCTTTTTACGTGTCGAATTAAAGTTATAAAATTATA AATATATACAATTACGAAGTGGACAGGCAGAAAGAACTATAACTTATAAA TACAACCAACCAACTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15598141..15598814 | 908..235 | 3370 | 100 | Minus |
chrX | 22417052 | chrX | 15596276..15596897 | 2567..1946 | 3095 | 99.8 | Minus |
chrX | 22417052 | chrX | 15596957..15597497 | 1950..1410 | 2705 | 100 | Minus |
chrX | 22417052 | chrX | 15597563..15598071 | 1411..903 | 2545 | 100 | Minus |
chrX | 22417052 | chrX | 15600136..15600371 | 236..1 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15708311..15708984 | 908..235 | 3370 | 100 | Minus |
X | 23542271 | X | 15706438..15707067 | 2575..1946 | 3105 | 99.5 | Minus |
X | 23542271 | X | 15707127..15707667 | 1950..1410 | 2705 | 100 | Minus |
X | 23542271 | X | 15707733..15708241 | 1411..903 | 2545 | 100 | Minus |
X | 23542271 | X | 15710306..15710541 | 236..1 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15716409..15717082 | 908..235 | 3370 | 100 | Minus |
X | 23527363 | X | 15714536..15715165 | 2575..1946 | 3105 | 99.5 | Minus |
X | 23527363 | X | 15715225..15715765 | 1950..1410 | 2705 | 100 | Minus |
X | 23527363 | X | 15715831..15716339 | 1411..903 | 2545 | 100 | Minus |
X | 23527363 | X | 15718404..15718639 | 236..1 | 1180 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15596276..15596894 | 1949..2567 | 95 | <- | Minus |
chrX | 15596959..15597495 | 1412..1948 | 100 | <- | Minus |
chrX | 15597563..15598068 | 906..1411 | 100 | <- | Minus |
chrX | 15598144..15598812 | 237..905 | 100 | <- | Minus |
chrX | 15600136..15600371 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RC | 1..1836 | 245..2080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RC | 1..1836 | 245..2080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 1..1836 | 245..2080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RC | 1..1836 | 245..2080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 1..1836 | 245..2080 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 58..2624 | 1..2567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 58..2624 | 1..2567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 1..2565 | 3..2567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 58..2624 | 1..2567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9281-RB | 1..2565 | 3..2567 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15707733..15708238 | 906..1411 | 100 | <- | Minus |
X | 15706446..15707064 | 1949..2567 | 99 | <- | Minus |
X | 15707129..15707665 | 1412..1948 | 100 | <- | Minus |
X | 15708314..15708982 | 237..905 | 100 | <- | Minus |
X | 15710306..15710541 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15707733..15708238 | 906..1411 | 100 | <- | Minus |
X | 15706446..15707064 | 1949..2567 | 99 | <- | Minus |
X | 15707129..15707665 | 1412..1948 | 100 | <- | Minus |
X | 15708314..15708982 | 237..905 | 100 | <- | Minus |
X | 15710306..15710541 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15707733..15708238 | 906..1411 | 100 | <- | Minus |
X | 15706446..15707064 | 1949..2567 | 99 | <- | Minus |
X | 15707129..15707665 | 1412..1948 | 100 | <- | Minus |
X | 15708314..15708982 | 237..905 | 100 | <- | Minus |
X | 15710306..15710541 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15600479..15601097 | 1949..2567 | 99 | <- | Minus |
arm_X | 15601162..15601698 | 1412..1948 | 100 | <- | Minus |
arm_X | 15601766..15602271 | 906..1411 | 100 | <- | Minus |
arm_X | 15602347..15603015 | 237..905 | 100 | <- | Minus |
arm_X | 15604339..15604574 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15714544..15715162 | 1949..2567 | 99 | <- | Minus |
X | 15715227..15715763 | 1412..1948 | 100 | <- | Minus |
X | 15715831..15716336 | 906..1411 | 100 | <- | Minus |
X | 15716412..15717080 | 237..905 | 100 | <- | Minus |
X | 15718404..15718639 | 1..236 | 100 | Minus |
Translation from 244 to 2079
> LD02975.pep MSSAAKKREAQKKKDARNKKIQQIPSTKKANGVPERELTEEEKLCAKLEE EARISAEARSCTGSLAVHPRSRDVKIANFSITFFGSELLQDTMLELNCGR RYGLIGLNGCGKSSLLAVLGGREVPVPPHIDIFHLTREIPASSKSALQCV MEVDEERIKLEKLAEELAMSEEDDAQEQLIDIYERLDDMSADLAEVKAAR ILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLD LDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNY EAFVRTRMELLENQMKQYNWEQDQISHMKNYIARFGHGSAKLARQAQSKE KTLAKMVAQGLTEKVSDDKVLNFYFPSCGKVPPPVIMVQNVNFRYNDETP WIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHL RIARYHQHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQ VCPIRQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETIDALADAIN DFDGGMVLVSHDFRLINQVAEEIWVCEKETVTKWKGGILDYKDHLKNKIT SENEKKAKAGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22241-PA | 617 | GF22241-PA | 1..617 | 1..611 | 3187 | 96.3 | Plus |
Dana\GF23707-PA | 708 | GF23707-PA | 174..704 | 70..599 | 1089 | 42.2 | Plus |
Dana\GF19482-PA | 911 | GF19482-PA | 344..887 | 56..592 | 1080 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19381-PA | 611 | GG19381-PA | 1..611 | 1..611 | 3284 | 99.8 | Plus |
Dere\GG16045-PA | 708 | GG16045-PA | 174..704 | 70..599 | 1093 | 42.2 | Plus |
Dere\GG18434-PA | 916 | GG18434-PA | 349..892 | 56..592 | 1069 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17634-PA | 614 | GH17634-PA | 1..612 | 1..610 | 3183 | 96.6 | Plus |
Dgri\GH14627-PA | 708 | GH14627-PA | 174..704 | 70..599 | 1088 | 42.2 | Plus |
Dgri\GH24766-PA | 929 | GH24766-PA | 362..905 | 56..592 | 1071 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9281-PD | 611 | CG9281-PD | 1..611 | 1..611 | 3173 | 100 | Plus |
CG9281-PC | 611 | CG9281-PC | 1..611 | 1..611 | 3173 | 100 | Plus |
CG9281-PB | 611 | CG9281-PB | 1..611 | 1..611 | 3173 | 100 | Plus |
CG1703-PB | 901 | CG1703-PB | 287..884 | 2..599 | 1059 | 37.1 | Plus |
CG1703-PA | 901 | CG1703-PA | 287..884 | 2..599 | 1059 | 37.1 | Plus |
CG9330-PA | 708 | CG9330-PA | 91..708 | 9..603 | 1055 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16072-PA | 615 | GI16072-PA | 1..613 | 1..610 | 3167 | 96.1 | Plus |
Dmoj\GI13514-PA | 708 | GI13514-PA | 174..704 | 70..599 | 1096 | 42.4 | Plus |
Dmoj\GI15800-PA | 904 | GI15800-PA | 337..880 | 56..592 | 1086 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16523-PA | 611 | GL16523-PA | 1..611 | 1..611 | 3231 | 98 | Plus |
Dper\GL20943-PA | 708 | GL20943-PA | 174..704 | 70..599 | 1083 | 41.6 | Plus |
Dper\GL12895-PA | 436 | GL12895-PA | 22..432 | 56..458 | 801 | 40 | Plus |
Dper\GL12895-PA | 436 | GL12895-PA | 44..273 | 392..592 | 172 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21666-PA | 611 | GA21666-PA | 1..611 | 1..611 | 3236 | 98.2 | Plus |
Dpse\GA21707-PA | 708 | GA21707-PA | 174..704 | 70..599 | 1083 | 41.6 | Plus |
Dpse\GA14282-PA | 924 | GA14282-PA | 358..900 | 56..592 | 1077 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22536-PA | 611 | GM22536-PA | 1..611 | 1..611 | 3274 | 99.5 | Plus |
Dsec\GM19597-PA | 708 | GM19597-PA | 174..704 | 70..599 | 1093 | 42.2 | Plus |
Dsec\GM13097-PA | 902 | GM13097-PA | 335..878 | 56..592 | 1079 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15784-PA | 611 | GD15784-PA | 1..611 | 1..611 | 3276 | 99.5 | Plus |
Dsim\GD14814-PA | 708 | GD14814-PA | 174..704 | 70..599 | 1095 | 42.2 | Plus |
Dsim\GD17036-PA | 365 | GD17036-PA | 122..341 | 370..592 | 513 | 43.9 | Plus |
Dsim\GD17036-PA | 365 | GD17036-PA | 161..347 | 96..313 | 153 | 22.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15717-PA | 615 | GJ15717-PA | 1..613 | 1..610 | 3199 | 96.7 | Plus |
Dvir\GJ18654-PA | 914 | GJ18654-PA | 347..890 | 56..592 | 1087 | 41.3 | Plus |
Dvir\GJ11875-PA | 708 | GJ11875-PA | 174..704 | 70..599 | 1086 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10328-PA | 611 | GK10328-PA | 1..611 | 1..611 | 3215 | 97.2 | Plus |
Dwil\GK25023-PA | 890 | GK25023-PA | 323..866 | 56..592 | 1077 | 41 | Plus |
Dwil\GK25825-PA | 710 | GK25825-PA | 175..706 | 70..599 | 1076 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16028-PA | 611 | GE16028-PA | 1..611 | 1..611 | 3271 | 99.5 | Plus |
Dyak\GE19611-PA | 708 | GE19611-PA | 174..704 | 70..599 | 1093 | 42.2 | Plus |
Dyak\GE23211-PA | 711 | GE23211-PA | 174..707 | 70..599 | 1077 | 41.9 | Plus |
Dyak\GE15656-PA | 907 | GE15656-PA | 340..883 | 56..592 | 1077 | 40.6 | Plus |
Translation from 244 to 2079
> LD02975.hyp MSSAAKKREAQKKKDARNKKIQQIPSTKKANGVPERELTEEEKLCAKLEE EARISAEARSCTGSLAVHPRSRDVKIANFSITFFGSELLQDTMLELNCGR RYGLIGLNGCGKSSLLAVLGGREVPVPPHIDIFHLTREIPASSKSALQCV MEVDEERIKLEKLAEELAMSEEDDAQEQLIDIYERLDDMSADLAEVKAAR ILHGLGFDKAMQQKQAKDFSGGWRMRIALARALFVKPHLLLLDEPTNHLD LDACVWLEEELKTYKRILVLISHSQDFLNGVCTNIIHLTGKRLKYYTGNY EAFVRTRMELLENQMKQYNWEQDQISHMKNYIARFGHGSAKLARQAQSKE KTLAKMVAQGLTEKVSDDKVLNFYFPSCGKVPPPVIMVQNVNFRYNDETP WIYKNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHL RIARYHQHLHELLDLDASPLEYMMRAFPDVKEKEEMRKIIGRYGLTGRQQ VCPIRQLSDGQRCRVVFAWLAWQVPHLLLLDEPTNHLDMETIDALADAIN DFDGGMVLVSHDFRLINQVAEEIWVCEKETVTKWKGGILDYKDHLKNKIT SENEKKAKAGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9281-PD | 611 | CG9281-PD | 1..611 | 1..611 | 3173 | 100 | Plus |
CG9281-PC | 611 | CG9281-PC | 1..611 | 1..611 | 3173 | 100 | Plus |
CG9281-PB | 611 | CG9281-PB | 1..611 | 1..611 | 3173 | 100 | Plus |
CG1703-PB | 901 | CG1703-PB | 287..884 | 2..599 | 1059 | 37.1 | Plus |
CG9330-PA | 708 | CG9330-PA | 91..708 | 9..603 | 1055 | 38.5 | Plus |